RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 TSPY4P0CV99 314 aa4.77□□□□□ -1.65
SMG6-208ENST00000570874 TSPY10P0CW01 314 aa4.77□□□□□ -1.65
SMG6-208ENST00000570874 GRIPAP1Q4V328 841 aa4.77□□□□□ -1.65
SMG6-208ENST00000570874 EFCAB2Q5VUJ9 269 aa4.77□□□□□ -1.65
SMG6-208ENST00000570874 AFAP1Q8N556 730 aa4.77□□□□□ -1.65
SMG6-208ENST00000570874 HIRIP3Q9BW71 556 aaPredicted RBP4.77□□□□□ -1.65
SMG6-208ENST00000570874 KDM4CQ9H3R0 1056 aa4.77□□□□□ -1.65
SMG6-208ENST00000570874 PRDM10Q9NQV6 1147 aa4.77□□□□□ -1.65
SMG6-208ENST00000570874 PCDHB13Q9Y5F0 798 aa4.77□□□□□ -1.65
SMG6-208ENST00000570874 CD109Q6YHK3 1445 aa4.77□□□□□ -1.65
SMG6-208ENST00000570874 TONSLQ96HA7 1378 aa4.77□□□□□ -1.65
SMG6-208ENST00000570874 ERBB3P21860 1342 aa4.76□□□□□ -1.65
SMG6-208ENST00000570874 PPLO60437 1756 aa4.76□□□□□ -1.65
SMG6-208ENST00000570874 PPP1R15AO75807 674 aaPredicted RBP4.76□□□□□ -1.65
SMG6-208ENST00000570874 NKX1-1Q15270 411 aaPredicted RBP4.76□□□□□ -1.65
SMG6-208ENST00000570874 VWDEQ8N2E2 1590 aa4.76□□□□□ -1.65
SMG6-208ENST00000570874 GPATCH11Q8N954 259 aa4.76□□□□□ -1.65
SMG6-208ENST00000570874 CLUAP1Q96AJ1 413 aa4.76□□□□□ -1.65
SMG6-208ENST00000570874 AK7Q96M32 723 aa4.76□□□□□ -1.65
SMG6-208ENST00000570874 IGSF5Q9NSI5 407 aa4.76□□□□□ -1.65
SMG6-208ENST00000570874 PRDM15P57071 1507 aaPredicted RBP4.76□□□□□ -1.65
SMG6-208ENST00000570874 NUP155O75694 1391 aa4.76□□□□□ -1.65
SMG6-208ENST00000570874 UGGT1Q9NYU2 1555 aa4.75□□□□□ -1.65
SMG6-208ENST00000570874 POGZQ7Z3K3 1410 aa4.75□□□□□ -1.65
SMG6-208ENST00000570874 ERBINQ96RT1 1412 aa4.75□□□□□ -1.65
SMG6-208ENST00000570874 CHRM1P11229 460 aaPredicted RBP4.75□□□□□ -1.65
SMG6-208ENST00000570874 KCNA1Q09470 495 aa4.75□□□□□ -1.65
SMG6-208ENST00000570874 DIEXFQ68CQ4 756 aaKnown RBP4.75□□□□□ -1.65
SMG6-208ENST00000570874 CNPY4Q8N129 248 aa4.75□□□□□ -1.65
SMG6-208ENST00000570874 SGIP1Q9BQI5 828 aa4.75□□□□□ -1.65
SMG6-208ENST00000570874 ANO8Q9HCE9 1232 aaPredicted RBP4.75□□□□□ -1.65
SMG6-208ENST00000570874 CLTCQ00610 1675 aaKnown RBP4.75□□□□□ -1.65
SMG6-208ENST00000570874 PLA2R1Q13018 1463 aa4.75□□□□□ -1.65
SMG6-208ENST00000570874 SPAG9O60271 1321 aaKnown RBP4.74□□□□□ -1.65
SMG6-208ENST00000570874 PREX1Q8TCU6 1659 aa4.74□□□□□ -1.65
SMG6-208ENST00000570874 RTEL1-TNFRSF6BF6WH68 1400 aa4.74□□□□□ -1.65
SMG6-208ENST00000570874 HMGB1P1B2RPK0 211 aaPredicted RBP4.74□□□□□ -1.65
SMG6-208ENST00000570874 PTMAP06454 111 aaKnown RBP4.74□□□□□ -1.65
SMG6-208ENST00000570874 NBPF8Q3BBV2 869 aa4.74□□□□□ -1.65
SMG6-208ENST00000570874 GLIPR1L2Q4G1C9 344 aa4.74□□□□□ -1.65
SMG6-208ENST00000570874 GORABQ5T7V8 394 aa4.74□□□□□ -1.65
SMG6-208ENST00000570874 L3MBTL2Q969R5 705 aa4.74□□□□□ -1.65
SMG6-208ENST00000570874 DRC1Q96MC2 740 aa4.74□□□□□ -1.65
SMG6-208ENST00000570874 ATP10AO60312 1499 aa4.74□□□□□ -1.65
SMG6-208ENST00000570874 ZNF518AQ6AHZ1 1483 aa4.74□□□□□ -1.65
SMG6-208ENST00000570874 NEO1Q92859 1461 aa4.74□□□□□ -1.65
SMG6-208ENST00000570874 ZC3H13Q5T200 1668 aaKnown RBP4.73□□□□□ -1.65
SMG6-208ENST00000570874 ZC3H4Q9UPT8 1303 aaKnown RBP4.73□□□□□ -1.65
SMG6-208ENST00000570874 ZMYM4Q5VZL5 1548 aa4.73□□□□□ -1.65
SMG6-208ENST00000570874 MADDQ8WXG6 1647 aa4.73□□□□□ -1.65
SMG6-208ENST00000570874 ANKRD62A6NC57 917 aa4.73□□□□□ -1.65
SMG6-208ENST00000570874 MARCH6O60337 910 aa4.73□□□□□ -1.65
SMG6-208ENST00000570874 ONECUT3O60422 494 aaPredicted RBP4.73□□□□□ -1.65
SMG6-208ENST00000570874 HOXB1P14653 301 aaPredicted RBP4.73□□□□□ -1.65
SMG6-208ENST00000570874 VARS2Q5ST30 1063 aaKnown RBP4.73□□□□□ -1.65
SMG6-208ENST00000570874 ERICH6BQ5W0A0 696 aa4.73□□□□□ -1.65
SMG6-208ENST00000570874 IRX2Q9BZI1 471 aaPredicted RBP4.73□□□□□ -1.65
SMG6-208ENST00000570874 A2MP01023 1474 aa4.73□□□□□ -1.65
SMG6-208ENST00000570874 IQGAP1P46940 1657 aa4.73□□□□□ -1.65
SMG6-208ENST00000570874 YEATS2Q9ULM3 1422 aa4.72□□□□□ -1.65
SMG6-208ENST00000570874 TRPM2O94759 1503 aa4.72□□□□□ -1.65
SMG6-208ENST00000570874 EFCAB6Q5THR3 1501 aa4.72□□□□□ -1.65
SMG6-208ENST00000570874 TPD52L2O43399 206 aaKnown RBP4.72□□□□□ -1.65
SMG6-208ENST00000570874 RAPGEF3O95398 923 aa4.72□□□□□ -1.65
SMG6-208ENST00000570874 BRD1O95696 1058 aa4.72□□□□□ -1.65
SMG6-208ENST00000570874 HOXB3P14651 431 aaPredicted RBP4.72□□□□□ -1.65
SMG6-208ENST00000570874 RBM10P98175 930 aaKnown RBP4.72□□□□□ -1.65
SMG6-208ENST00000570874 SPTY2D1Q68D10 685 aaPredicted RBP4.72□□□□□ -1.65
SMG6-208ENST00000570874 IFNL1Q8IU54 200 aa4.72□□□□□ -1.65
SMG6-208ENST00000570874 RASEFQ8IZ41 740 aa4.72□□□□□ -1.65
SMG6-208ENST00000570874 RYDENQ9NUL5 291 aaKnown RBP4.72□□□□□ -1.65
SMG6-208ENST00000570874 CIZ1Q9ULV3 898 aaPredicted RBP4.72□□□□□ -1.65
SMG6-208ENST00000570874 LAS1LQ9Y4W2 734 aaKnown RBP4.72□□□□□ -1.65
SMG6-208ENST00000570874 ARIH1Q9Y4X5 557 aaPredicted RBP4.72□□□□□ -1.65
SMG6-208ENST00000570874 MLH3Q9UHC1 1453 aa4.72□□□□□ -1.65
SMG6-208ENST00000570874 SYNMO15061 1565 aa4.71□□□□□ -1.66
SMG6-208ENST00000570874 COL17A1Q9UMD9 1497 aaPredicted RBP4.71□□□□□ -1.66
SMG6-208ENST00000570874 UNCXA6NJT0 531 aa4.71□□□□□ -1.66
SMG6-208ENST00000570874 FAM69CQ0P6D2 419 aa4.71□□□□□ -1.66
SMG6-208ENST00000570874 TSR1Q2NL82 804 aaKnown RBP4.71□□□□□ -1.66
SMG6-208ENST00000570874 RTL5Q5HYW3 569 aaPredicted RBP4.71□□□□□ -1.66
SMG6-208ENST00000570874 PROSER2Q86WR7 435 aaPredicted RBP4.71□□□□□ -1.66
SMG6-208ENST00000570874 MIER1Q8N108 512 aa4.71□□□□□ -1.66
SMG6-208ENST00000570874 SREK1Q8WXA9 508 aaKnown RBP4.71□□□□□ -1.66
SMG6-208ENST00000570874 PPME1Q9Y570 386 aa4.71□□□□□ -1.66
SMG6-208ENST00000570874 KIAA1210Q9ULL0 1709 aa4.71□□□□□ -1.66
SMG6-208ENST00000570874 PIK3C2BO00750 1634 aa4.71□□□□□ -1.66
SMG6-208ENST00000570874 ABCC3O15438 1527 aa4.71□□□□□ -1.66
SMG6-208ENST00000570874 DHX29Q7Z478 1369 aaKnown RBP4.7□□□□□ -1.66
SMG6-208ENST00000570874 TESPA1A2RU30 521 aaPredicted RBP4.7□□□□□ -1.66
SMG6-208ENST00000570874 KIF3BO15066 747 aa4.7□□□□□ -1.66
SMG6-208ENST00000570874 TMTC2Q8N394 836 aa4.7□□□□□ -1.66
SMG6-208ENST00000570874 LAMC1P11047 1609 aa4.7□□□□□ -1.66
SMG6-208ENST00000570874 ARHGEF40Q8TER5 1519 aa4.7□□□□□ -1.66
SMG6-208ENST00000570874 FER1L4A9Z1Z3 1794 aa4.7□□□□□ -1.66
SMG6-208ENST00000570874 RALGAPBQ86X10 1494 aa4.69□□□□□ -1.66
SMG6-208ENST00000570874 LMTK2Q8IWU2 1503 aa4.69□□□□□ -1.66
SMG6-208ENST00000570874 HSPA5P11021 654 aaKnown RBP4.69□□□□□ -1.66
SMG6-208ENST00000570874 ZNF710Q8N1W2 664 aa4.69□□□□□ -1.66
SMG6-208ENST00000570874 ARHGEF1Q92888 912 aaKnown RBP4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms