RNA–Protein interactions for RNA: ENST00000570749.5

TRIM25-204, Transcript of tripartite motif containing 25, humanhuman

TSL 2

Gene TRIM25, Length 614 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-204ENST00000570749 RALGAPBQ86X10 1494 aa13.93□□□□□ -0.18
TRIM25-204ENST00000570749 VPS72Q15906 364 aa13.92□□□□□ -0.18
TRIM25-204ENST00000570749 CCDC125Q86Z20 511 aa13.92□□□□□ -0.18
TRIM25-204ENST00000570749 PLEKHG3A1L390 1219 aa13.91□□□□□ -0.18
TRIM25-204ENST00000570749 L3MBTL2Q969R5 705 aa13.91□□□□□ -0.18
TRIM25-204ENST00000570749 NBPF1Q3BBV0 1214 aa13.9□□□□□ -0.18
TRIM25-204ENST00000570749 PAK3O75914 559 aaPredicted RBP13.89□□□□□ -0.19
TRIM25-204ENST00000570749 CABLES1Q8TDN4 633 aa13.89□□□□□ -0.19
TRIM25-204ENST00000570749 BRWD3Q6RI45 1802 aa13.88□□□□□ -0.19
TRIM25-204ENST00000570749 ROCK2O75116 1388 aaKnown RBP13.88□□□□□ -0.19
TRIM25-204ENST00000570749 SRPK2P78362 688 aaKnown RBP13.88□□□□□ -0.19
TRIM25-204ENST00000570749 PPIP5K1Q6PFW1 1433 aa13.88□□□□□ -0.19
TRIM25-204ENST00000570749 ACEP12821 1306 aa13.88□□□□□ -0.19
TRIM25-204ENST00000570749 ONECUT3O60422 494 aaPredicted RBP13.87□□□□□ -0.19
TRIM25-204ENST00000570749 EVC2Q86UK5 1308 aa13.87□□□□□ -0.19
TRIM25-204ENST00000570749 SBNO2Q9Y2G9 1366 aa13.86□□□□□ -0.19
TRIM25-204ENST00000570749 NBPF8Q3BBV2 869 aa13.86□□□□□ -0.19
TRIM25-204ENST00000570749 NRKQ7Z2Y5 1582 aa13.85□□□□□ -0.19
TRIM25-204ENST00000570749 FAM83GA6ND36 823 aa13.85□□□□□ -0.19
TRIM25-204ENST00000570749 SIN3AQ96ST3 1273 aa13.85□□□□□ -0.19
TRIM25-204ENST00000570749 BLMP54132 1417 aaPredicted RBP13.84□□□□□ -0.19
TRIM25-204ENST00000570749 NEUROD1Q13562 356 aa13.84□□□□□ -0.19
TRIM25-204ENST00000570749 PRDM11Q9NQV5 511 aa13.84□□□□□ -0.19
TRIM25-204ENST00000570749 BTG4Q9NY30 223 aa13.84□□□□□ -0.19
TRIM25-204ENST00000570749 CCDC9Q9Y3X0 531 aaKnown RBP13.84□□□□□ -0.19
TRIM25-204ENST00000570749 CPDO75976 1380 aa13.83□□□□□ -0.19
TRIM25-204ENST00000570749 TONSLQ96HA7 1378 aa13.83□□□□□ -0.19
TRIM25-204ENST00000570749 AKAP12Q02952 1782 aa13.83□□□□□ -0.19
TRIM25-204ENST00000570749 TRIM26Q12899 539 aaPredicted RBP13.83□□□□□ -0.2
TRIM25-204ENST00000570749 USP19O94966 1318 aa13.83□□□□□ -0.2
TRIM25-204ENST00000570749 USP6P35125 1406 aa13.82□□□□□ -0.2
TRIM25-204ENST00000570749 NLRP13Q86W25 1043 aa13.82□□□□□ -0.2
TRIM25-204ENST00000570749 SEPT12Q8IYM1 358 aa13.82□□□□□ -0.2
TRIM25-204ENST00000570749 ABTB2Q8N961 1025 aa13.82□□□□□ -0.2
TRIM25-204ENST00000570749 KIAA0232Q92628 1395 aa13.82□□□□□ -0.2
TRIM25-204ENST00000570749 THSD7AQ9UPZ6 1657 aa13.82□□□□□ -0.2
TRIM25-204ENST00000570749 SLC24A1O60721 1099 aa13.81□□□□□ -0.2
TRIM25-204ENST00000570749 ZNF692Q9BU19 519 aaPredicted RBP13.81□□□□□ -0.2
TRIM25-204ENST00000570749 CABP2Q9NPB3 220 aa13.81□□□□□ -0.2
TRIM25-204ENST00000570749 LMO7Q8WWI1 1683 aa13.81□□□□□ -0.2
TRIM25-204ENST00000570749 PLEKHG5O94827 1062 aa13.8□□□□□ -0.2
TRIM25-204ENST00000570749 KRT27Q7Z3Y8 459 aa13.8□□□□□ -0.2
TRIM25-204ENST00000570749 RGPD1P0DJD0 1748 aa13.8□□□□□ -0.2
TRIM25-204ENST00000570749 SPATA31A5Q5VU36 1347 aa13.8□□□□□ -0.2
TRIM25-204ENST00000570749 SPATA31A7Q8IWB4 1347 aa13.8□□□□□ -0.2
TRIM25-204ENST00000570749 SLIT3O75094 1523 aa13.8□□□□□ -0.2
TRIM25-204ENST00000570749 SF3B2Q13435 895 aaKnown RBP13.79□□□□□ -0.2
TRIM25-204ENST00000570749 PIK3C2AO00443 1686 aa13.79□□□□□ -0.2
TRIM25-204ENST00000570749 MON2Q7Z3U7 1717 aa13.78□□□□□ -0.2
TRIM25-204ENST00000570749 CABP1Q9NZU7 370 aa13.78□□□□□ -0.2
TRIM25-204ENST00000570749 SSH2Q76I76 1423 aa13.78□□□□□ -0.2
TRIM25-204ENST00000570749 A0A0G2JS52 829 aa13.77□□□□□ -0.21
TRIM25-204ENST00000570749 ABCC6O95255 1503 aa13.77□□□□□ -0.21
TRIM25-204ENST00000570749 MYT1Q01538 1121 aa13.77□□□□□ -0.21
TRIM25-204ENST00000570749 USP54Q70EL1 1684 aa13.77□□□□□ -0.21
TRIM25-204ENST00000570749 TTC21AQ8NDW8 1320 aa13.77□□□□□ -0.21
TRIM25-204ENST00000570749 CARD11Q9BXL7 1154 aa13.77□□□□□ -0.21
TRIM25-204ENST00000570749 SPATA31A1Q5TZJ5 1347 aa13.76□□□□□ -0.21
TRIM25-204ENST00000570749 GCP02774 474 aa13.76□□□□□ -0.21
TRIM25-204ENST00000570749 FAM98CQ17RN3 349 aaKnown RBP13.76□□□□□ -0.21
TRIM25-204ENST00000570749 PUS7Q96PZ0 661 aaKnown RBP13.76□□□□□ -0.21
TRIM25-204ENST00000570749 ZC3H6P61129 1189 aaKnown RBP13.75□□□□□ -0.21
TRIM25-204ENST00000570749 KCNH5Q8NCM2 988 aa13.75□□□□□ -0.21
TRIM25-204ENST00000570749 ZRANB1Q9UGI0 708 aa13.75□□□□□ -0.21
TRIM25-204ENST00000570749 THRAP3Q9Y2W1 955 aaKnown RBP13.75□□□□□ -0.21
TRIM25-204ENST00000570749 CAMTA1Q9Y6Y1 1673 aa13.75□□□□□ -0.21
TRIM25-204ENST00000570749 CPSF1Q10570 1443 aaKnown RBP13.74□□□□□ -0.21
TRIM25-204ENST00000570749 PARP4Q9UKK3 1724 aaKnown RBP13.74□□□□□ -0.21
TRIM25-204ENST00000570749 C11orf95C9JLR9 678 aaPredicted RBP13.74□□□□□ -0.21
TRIM25-204ENST00000570749 EVA1CP58658 441 aa13.74□□□□□ -0.21
TRIM25-204ENST00000570749 BARGINQ6ZT62 677 aa13.74□□□□□ -0.21
TRIM25-204ENST00000570749 COL5A2P05997 1499 aaPredicted RBP13.74□□□□□ -0.21
TRIM25-204ENST00000570749 AATKQ6ZMQ8 1374 aa13.73□□□□□ -0.21
TRIM25-204ENST00000570749 NINLQ9Y2I6 1382 aa13.73□□□□□ -0.21
TRIM25-204ENST00000570749 NLRP6P59044 892 aa13.73□□□□□ -0.21
TRIM25-204ENST00000570749 CHRNA2Q15822 529 aa13.73□□□□□ -0.21
TRIM25-204ENST00000570749 NUTM2GQ5VZR2 741 aa13.73□□□□□ -0.21
TRIM25-204ENST00000570749 KTN1Q86UP2 1357 aaKnown RBP13.72□□□□□ -0.21
TRIM25-204ENST00000570749 BAG6P46379 1132 aa13.72□□□□□ -0.21
TRIM25-204ENST00000570749 STRN4Q9NRL3 753 aa13.72□□□□□ -0.21
TRIM25-204ENST00000570749 DISP2A7MBM2 1401 aa13.72□□□□□ -0.21
TRIM25-204ENST00000570749 COL18A1P39060 1754 aa13.71□□□□□ -0.21
TRIM25-204ENST00000570749 TTC21BQ7Z4L5 1316 aa13.71□□□□□ -0.21
TRIM25-204ENST00000570749 CLSPNQ9HAW4 1339 aa13.71□□□□□ -0.21
TRIM25-204ENST00000570749 TNS1Q9HBL0 1735 aaKnown RBP13.71□□□□□ -0.21
TRIM25-204ENST00000570749 CRB1P82279 1406 aa13.71□□□□□ -0.22
TRIM25-204ENST00000570749 WNK3Q9BYP7 1800 aa13.71□□□□□ -0.22
TRIM25-204ENST00000570749 TCP11L2Q8N4U5 519 aa13.7□□□□□ -0.22
TRIM25-204ENST00000570749 TIMELESSQ9UNS1 1208 aa13.7□□□□□ -0.22
TRIM25-204ENST00000570749 FAM196AQ6ZSG2 479 aa13.69□□□□□ -0.22
TRIM25-204ENST00000570749 HDGFL2Q7Z4V5 671 aaPredicted RBP13.69□□□□□ -0.22
TRIM25-204ENST00000570749 EDC4Q6P2E9 1401 aaKnown RBP13.69□□□□□ -0.22
TRIM25-204ENST00000570749 SRCAPQ6ZRS2 3230 aa13.69□□□□□ -0.22
TRIM25-204ENST00000570749 USP31Q70CQ4 1352 aa13.69□□□□□ -0.22
TRIM25-204ENST00000570749 PARD3Q8TEW0 1356 aa13.69□□□□□ -0.22
TRIM25-204ENST00000570749 TERF2IPQ9NYB0 399 aa13.68□□□□□ -0.22
TRIM25-204ENST00000570749 NFAT5O94916 1531 aa13.68□□□□□ -0.22
TRIM25-204ENST00000570749 PDE3BQ13370 1112 aa13.67□□□□□ -0.22
TRIM25-204ENST00000570749 LARP1Q6PKG0 1096 aaKnown RBP13.67□□□□□ -0.22
TRIM25-204ENST00000570749 CDCA7Q9BWT1 371 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms