RNA–Protein interactions for RNA: ENST00000570606.5

SMG6-204, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-204ENST00000570606 COL22A1Q8NFW1 1626 aaPredicted RBP9.69□□□□□ -0.86
SMG6-204ENST00000570606 RYDENQ9NUL5 291 aaKnown RBP9.69□□□□□ -0.86
SMG6-204ENST00000570606 MARF1Q9Y4F3 1742 aaKnown RBP9.68□□□□□ -0.86
SMG6-204ENST00000570606 ADAMTS2O95450 1211 aa9.68□□□□□ -0.86
SMG6-204ENST00000570606 ZNF579Q8NAF0 562 aaKnown RBP9.68□□□□□ -0.86
SMG6-204ENST00000570606 UPF1Q92900 1129 aaKnown RBP eCLIP9.68□□□□□ -0.86
SMG6-204ENST00000570606 ORAI2Q96SN7 254 aa9.68□□□□□ -0.86
SMG6-204ENST00000570606 ANKRD30BQ9BXX2 1392 aa9.67□□□□□ -0.86
SMG6-204ENST00000570606 SOS2Q07890 1332 aaPredicted RBP9.67□□□□□ -0.86
SMG6-204ENST00000570606 NGLY1Q96IV0 654 aa9.67□□□□□ -0.86
SMG6-204ENST00000570606 FMN2Q9NZ56 1722 aa9.67□□□□□ -0.86
SMG6-204ENST00000570606 KIF1AQ12756 1690 aa9.67□□□□□ -0.86
SMG6-204ENST00000570606 TECPR2O15040 1411 aa9.66□□□□□ -0.86
SMG6-204ENST00000570606 SPATA31E1Q6ZUB1 1445 aa9.66□□□□□ -0.86
SMG6-204ENST00000570606 NPHP3Q7Z494 1330 aa9.66□□□□□ -0.86
SMG6-204ENST00000570606 ADGRF5Q8IZF2 1346 aa9.66□□□□□ -0.86
SMG6-204ENST00000570606 RBM6P78332 1123 aaKnown RBP9.66□□□□□ -0.86
SMG6-204ENST00000570606 RGL3Q3MIN7 710 aa9.66□□□□□ -0.86
SMG6-204ENST00000570606 QTRT2Q9H974 415 aaKnown RBP9.66□□□□□ -0.86
SMG6-204ENST00000570606 STK26Q9P289 416 aa9.66□□□□□ -0.86
SMG6-204ENST00000570606 MYOM2P54296 1465 aa9.66□□□□□ -0.86
SMG6-204ENST00000570606 PXDNQ92626 1479 aa9.66□□□□□ -0.86
SMG6-204ENST00000570606 PIK3C2GO75747 1445 aa9.65□□□□□ -0.86
SMG6-204ENST00000570606 LRPPRCP42704 1394 aaKnown RBP9.65□□□□□ -0.86
SMG6-204ENST00000570606 PAK3O75914 559 aaPredicted RBP9.65□□□□□ -0.86
SMG6-204ENST00000570606 ESCO1Q5FWF5 840 aa9.65□□□□□ -0.86
SMG6-204ENST00000570606 PSEN1P49768 467 aa9.64□□□□□ -0.87
SMG6-204ENST00000570606 MPHOSPH9Q99550 1183 aa9.64□□□□□ -0.87
SMG6-204ENST00000570606 USP21Q9UK80 565 aa9.64□□□□□ -0.87
SMG6-204ENST00000570606 YTHDC2Q9H6S0 1430 aaKnown RBP9.64□□□□□ -0.87
SMG6-204ENST00000570606 RGPD8O14715 1765 aaPredicted RBP9.63□□□□□ -0.87
SMG6-204ENST00000570606 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.63□□□□□ -0.87
SMG6-204ENST00000570606 NUTM2FA1L443 756 aa9.63□□□□□ -0.87
SMG6-204ENST00000570606 XPCQ01831 940 aaPredicted RBP9.63□□□□□ -0.87
SMG6-204ENST00000570606 IFNL1Q8IU54 200 aa9.63□□□□□ -0.87
SMG6-204ENST00000570606 KIF12Q96FN5 646 aa9.63□□□□□ -0.87
SMG6-204ENST00000570606 TRPC5Q9UL62 973 aaPredicted RBP9.63□□□□□ -0.87
SMG6-204ENST00000570606 ATAD2Q6PL18 1390 aa9.63□□□□□ -0.87
SMG6-204ENST00000570606 PLEKHH1Q9ULM0 1364 aa9.63□□□□□ -0.87
SMG6-204ENST00000570606 MAP3K13O43283 966 aa9.62□□□□□ -0.87
SMG6-204ENST00000570606 TMEM132EQ6IEE7 984 aa9.62□□□□□ -0.87
SMG6-204ENST00000570606 WAPLQ7Z5K2 1190 aa9.62□□□□□ -0.87
SMG6-204ENST00000570606 ATRNO75882 1429 aa9.62□□□□□ -0.87
SMG6-204ENST00000570606 ABCC11Q96J66 1382 aa9.62□□□□□ -0.87
SMG6-204ENST00000570606 USP32Q8NFA0 1604 aa9.61□□□□□ -0.87
SMG6-204ENST00000570606 FOXO3O43524 673 aa9.61□□□□□ -0.87
SMG6-204ENST00000570606 ABCA3Q99758 1704 aa9.6□□□□□ -0.87
SMG6-204ENST00000570606 PRKCSHP14314 528 aaPredicted RBP9.6□□□□□ -0.87
SMG6-204ENST00000570606 NRXN1Q9ULB1 1477 aa9.59□□□□□ -0.87
SMG6-204ENST00000570606 ACIN1Q9UKV3 1341 aaKnown RBP9.59□□□□□ -0.87
SMG6-204ENST00000570606 EP400Q96L91 3159 aa9.59□□□□□ -0.87
SMG6-204ENST00000570606 PLCH1Q4KWH8 1693 aa9.59□□□□□ -0.87
SMG6-204ENST00000570606 FNBP4Q8N3X1 1017 aaPredicted RBP9.59□□□□□ -0.87
SMG6-204ENST00000570606 MFRPQ9BY79 579 aa9.59□□□□□ -0.87
SMG6-204ENST00000570606 DHX57Q6P158 1386 aaKnown RBP9.59□□□□□ -0.87
SMG6-204ENST00000570606 TNS3Q68CZ2 1445 aa9.58□□□□□ -0.88
SMG6-204ENST00000570606 BCL9LQ86UU0 1499 aa9.58□□□□□ -0.88
SMG6-204ENST00000570606 ADGRB2O60241 1585 aa9.58□□□□□ -0.88
SMG6-204ENST00000570606 DLC1Q96QB1 1528 aa9.57□□□□□ -0.88
SMG6-204ENST00000570606 NWD2Q9ULI1 1742 aa9.57□□□□□ -0.88
SMG6-204ENST00000570606 SAFB2Q14151 953 aaKnown RBP eCLIP9.57□□□□□ -0.88
SMG6-204ENST00000570606 RAB3GAP2Q9H2M9 1393 aa9.57□□□□□ -0.88
SMG6-204ENST00000570606 GLI3P10071 1580 aa9.57□□□□□ -0.88
SMG6-204ENST00000570606 SPATA31A3Q5VYP0 1347 aa9.56□□□□□ -0.88
SMG6-204ENST00000570606 BRWD3Q6RI45 1802 aa9.56□□□□□ -0.88
SMG6-204ENST00000570606 CD44P16070 742 aaKnown RBP9.56□□□□□ -0.88
SMG6-204ENST00000570606 CFAP70Q5T0N1 1121 aa9.56□□□□□ -0.88
SMG6-204ENST00000570606 C14orf93Q9H972 538 aaKnown RBP9.56□□□□□ -0.88
SMG6-204ENST00000570606 ZRANB1Q9UGI0 708 aa9.56□□□□□ -0.88
SMG6-204ENST00000570606 PHF8Q9UPP1 1060 aa9.56□□□□□ -0.88
SMG6-204ENST00000570606 SLIT2O94813 1529 aa9.56□□□□□ -0.88
SMG6-204ENST00000570606 RALGAPBQ86X10 1494 aa9.55□□□□□ -0.88
SMG6-204ENST00000570606 KRT28Q7Z3Y7 464 aa9.55□□□□□ -0.88
SMG6-204ENST00000570606 PRAM1Q96QH2 718 aa9.55□□□□□ -0.88
SMG6-204ENST00000570606 POGKQ9P215 609 aa9.55□□□□□ -0.88
SMG6-204ENST00000570606 ANKARQ7Z5J8 1434 aa9.55□□□□□ -0.88
SMG6-204ENST00000570606 ADGRB1O14514 1584 aa9.54□□□□□ -0.88
SMG6-204ENST00000570606 ITSN1Q15811 1721 aa9.54□□□□□ -0.88
SMG6-204ENST00000570606 ARHGEF10O15013 1369 aa9.54□□□□□ -0.88
SMG6-204ENST00000570606 PSME1Q06323 249 aa9.54□□□□□ -0.88
SMG6-204ENST00000570606 NBR1Q14596 966 aa9.54□□□□□ -0.88
SMG6-204ENST00000570606 LMOD2Q6P5Q4 547 aa9.54□□□□□ -0.88
SMG6-204ENST00000570606 UNC5CLQ8IV45 518 aa9.54□□□□□ -0.88
SMG6-204ENST00000570606 SIRT1Q96EB6 747 aa9.54□□□□□ -0.88
SMG6-204ENST00000570606 GJD4Q96KN9 370 aaPredicted RBP9.54□□□□□ -0.88
SMG6-204ENST00000570606 ARHGEF28Q8N1W1 1705 aaKnown RBP9.53□□□□□ -0.88
SMG6-204ENST00000570606 TRPM3Q9HCF6 1732 aaPredicted RBP9.53□□□□□ -0.88
SMG6-204ENST00000570606 SBNO1A3KN83 1393 aa9.53□□□□□ -0.88
SMG6-204ENST00000570606 EIF3AQ14152 1382 aaKnown RBP9.53□□□□□ -0.88
SMG6-204ENST00000570606 TULP4Q9NRJ4 1543 aa9.53□□□□□ -0.88
SMG6-204ENST00000570606 PHF12Q96QT6 1004 aa9.53□□□□□ -0.88
SMG6-204ENST00000570606 ALS2Q96Q42 1657 aa9.52□□□□□ -0.89
SMG6-204ENST00000570606 TPRNQ4KMQ1 711 aa9.52□□□□□ -0.89
SMG6-204ENST00000570606 SRCAPQ6ZRS2 3230 aa9.52□□□□□ -0.89
SMG6-204ENST00000570606 NRAPQ86VF7 1730 aa9.52□□□□□ -0.89
SMG6-204ENST00000570606 EFCAB3Q8N7B9 438 aa9.52□□□□□ -0.89
SMG6-204ENST00000570606 FBXO22Q8NEZ5 403 aa9.52□□□□□ -0.89
SMG6-204ENST00000570606 CABP2Q9NPB3 220 aa9.52□□□□□ -0.89
SMG6-204ENST00000570606 CCDC9Q9Y3X0 531 aaKnown RBP9.52□□□□□ -0.89
SMG6-204ENST00000570606 MINK1Q8N4C8 1332 aaPredicted RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms