RNA–Protein interactions for RNA: ENST00000570287.6

TCF4-246, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-246ENST00000570287 DEPDC5O75140 1603 aa10.54□□□□□ -0.72
TCF4-246ENST00000570287 MFSD10Q14728 455 aa10.53□□□□□ -0.72
TCF4-246ENST00000570287 RTL5Q5HYW3 569 aaPredicted RBP10.53□□□□□ -0.72
TCF4-246ENST00000570287 CRISPLD2Q9H0B8 497 aa10.53□□□□□ -0.72
TCF4-246ENST00000570287 FANCAO15360 1455 aa10.52□□□□□ -0.72
TCF4-246ENST00000570287 INO80Q9ULG1 1556 aaPredicted RBP10.52□□□□□ -0.72
TCF4-246ENST00000570287 TXNDC2Q86VQ3 553 aa10.52□□□□□ -0.73
TCF4-246ENST00000570287 AFAP1Q8N556 730 aa10.52□□□□□ -0.73
TCF4-246ENST00000570287 NUTM2FA1L443 756 aa10.52□□□□□ -0.73
TCF4-246ENST00000570287 TRPM2O94759 1503 aa10.52□□□□□ -0.73
TCF4-246ENST00000570287 ATP7AQ04656 1500 aa10.52□□□□□ -0.73
TCF4-246ENST00000570287 EFCAB3Q8N7B9 438 aa10.51□□□□□ -0.73
TCF4-246ENST00000570287 RALBP1Q15311 655 aa10.51□□□□□ -0.73
TCF4-246ENST00000570287 NBPF1Q3BBV0 1214 aa10.51□□□□□ -0.73
TCF4-246ENST00000570287 RNF17Q9BXT8 1623 aaKnown RBP10.5□□□□□ -0.73
TCF4-246ENST00000570287 TET3O43151 1660 aa10.5□□□□□ -0.73
TCF4-246ENST00000570287 PTPRTO14522 1441 aa10.5□□□□□ -0.73
TCF4-246ENST00000570287 STAC3Q96MF2 364 aa10.5□□□□□ -0.73
TCF4-246ENST00000570287 COL17A1Q9UMD9 1497 aaPredicted RBP10.5□□□□□ -0.73
TCF4-246ENST00000570287 VWDEQ8N2E2 1590 aa10.5□□□□□ -0.73
TCF4-246ENST00000570287 SPHKAPQ2M3C7 1700 aa10.5□□□□□ -0.73
TCF4-246ENST00000570287 ADGRL1O94910 1474 aa10.49□□□□□ -0.73
TCF4-246ENST00000570287 SH3D19Q5HYK7 790 aa10.49□□□□□ -0.73
TCF4-246ENST00000570287 CEP152O94986 1710 aa10.49□□□□□ -0.73
TCF4-246ENST00000570287 ASXL2Q76L83 1435 aa10.49□□□□□ -0.73
TCF4-246ENST00000570287 BRD4O60885 1362 aaPredicted RBP10.49□□□□□ -0.73
TCF4-246ENST00000570287 POTEDQ86YR6 584 aa10.49□□□□□ -0.73
TCF4-246ENST00000570287 SIRT1Q96EB6 747 aa10.49□□□□□ -0.73
TCF4-246ENST00000570287 MYBBP1AQ9BQG0 1328 aaKnown RBP10.49□□□□□ -0.73
TCF4-246ENST00000570287 KANK1Q14678 1352 aa10.49□□□□□ -0.73
TCF4-246ENST00000570287 ANP32AP39687 249 aaKnown RBP10.49□□□□□ -0.73
TCF4-246ENST00000570287 RBM10P98175 930 aaKnown RBP10.49□□□□□ -0.73
TCF4-246ENST00000570287 NOM1Q5C9Z4 860 aaKnown RBP10.49□□□□□ -0.73
TCF4-246ENST00000570287 B4GALNT3Q6L9W6 998 aa10.49□□□□□ -0.73
TCF4-246ENST00000570287 ADAMTS19Q8TE59 1207 aa10.49□□□□□ -0.73
TCF4-246ENST00000570287 PNISRQ8TF01 805 aaKnown RBP10.49□□□□□ -0.73
TCF4-246ENST00000570287 SPATA32Q96LK8 384 aa10.49□□□□□ -0.73
TCF4-246ENST00000570287 EMILIN3Q9NT22 766 aa10.49□□□□□ -0.73
TCF4-246ENST00000570287 TMC1Q8TDI8 760 aa10.48□□□□□ -0.73
TCF4-246ENST00000570287 SCAPERQ9BY12 1400 aa10.48□□□□□ -0.73
TCF4-246ENST00000570287 ZNF662Q6ZS27 426 aa10.48□□□□□ -0.73
TCF4-246ENST00000570287 TESK2Q96S53 571 aa10.48□□□□□ -0.73
TCF4-246ENST00000570287 RNF123Q5XPI4 1314 aa10.48□□□□□ -0.73
TCF4-246ENST00000570287 MADDQ8WXG6 1647 aa10.47□□□□□ -0.73
TCF4-246ENST00000570287 RBM47A0AV96 593 aaKnown RBP10.47□□□□□ -0.73
TCF4-246ENST00000570287 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.47□□□□□ -0.73
TCF4-246ENST00000570287 NEURL4Q96JN8 1562 aa10.47□□□□□ -0.73
TCF4-246ENST00000570287 SMG6Q86US8 1419 aaKnown RBP10.47□□□□□ -0.73
TCF4-246ENST00000570287 PBXIP1Q96AQ6 731 aa10.47□□□□□ -0.73
TCF4-246ENST00000570287 LRPPRCP42704 1394 aaKnown RBP10.46□□□□□ -0.73
TCF4-246ENST00000570287 CNGB1Q14028 1251 aaPredicted RBP10.46□□□□□ -0.73
TCF4-246ENST00000570287 CLTCL1P53675 1640 aa10.46□□□□□ -0.73
TCF4-246ENST00000570287 PARD3Q8TEW0 1356 aa10.46□□□□□ -0.73
TCF4-246ENST00000570287 PDE4AP27815 886 aa10.45□□□□□ -0.74
TCF4-246ENST00000570287 ABL2P42684 1182 aa10.45□□□□□ -0.74
TCF4-246ENST00000570287 TMF1P82094 1093 aa10.45□□□□□ -0.74
TCF4-246ENST00000570287 ZNF467Q7Z7K2 595 aaPredicted RBP10.45□□□□□ -0.74
TCF4-246ENST00000570287 DISP3Q9P2K9 1392 aa10.45□□□□□ -0.74
TCF4-246ENST00000570287 GRXCR2A6NFK2 248 aa10.45□□□□□ -0.74
TCF4-246ENST00000570287 PER1O15534 1290 aaPredicted RBP10.45□□□□□ -0.74
TCF4-246ENST00000570287 IQGAP1P46940 1657 aa10.45□□□□□ -0.74
TCF4-246ENST00000570287 MROH1Q8NDA8 1641 aa10.45□□□□□ -0.74
TCF4-246ENST00000570287 A0A0U1RQG5 324 aaPredicted RBP10.44□□□□□ -0.74
TCF4-246ENST00000570287 SPDYE5A6NIY4 337 aa10.44□□□□□ -0.74
TCF4-246ENST00000570287 PDAP1Q13442 181 aaKnown RBP10.44□□□□□ -0.74
TCF4-246ENST00000570287 CDCA8Q53HL2 280 aa10.44□□□□□ -0.74
TCF4-246ENST00000570287 CREBZFQ9NS37 354 aa10.44□□□□□ -0.74
TCF4-246ENST00000570287 KIF3BO15066 747 aa10.44□□□□□ -0.74
TCF4-246ENST00000570287 MTMR14Q8NCE2 650 aa10.44□□□□□ -0.74
TCF4-246ENST00000570287 CFAP74Q9C0B2 1584 aa10.44□□□□□ -0.74
TCF4-246ENST00000570287 KIDINS220Q9ULH0 1771 aa10.43□□□□□ -0.74
TCF4-246ENST00000570287 CFAP70Q5T0N1 1121 aa10.43□□□□□ -0.74
TCF4-246ENST00000570287 NLRP13Q86W25 1043 aa10.43□□□□□ -0.74
TCF4-246ENST00000570287 NUDCQ9Y266 331 aa10.43□□□□□ -0.74
TCF4-246ENST00000570287 ZNF518AQ6AHZ1 1483 aa10.43□□□□□ -0.74
TCF4-246ENST00000570287 SRPK2P78362 688 aaKnown RBP10.43□□□□□ -0.74
TCF4-246ENST00000570287 KIAA1210Q9ULL0 1709 aa10.43□□□□□ -0.74
TCF4-246ENST00000570287 GIMAP6Q6P9H5 292 aa10.42□□□□□ -0.74
TCF4-246ENST00000570287 NLRP7Q8WX94 980 aa10.42□□□□□ -0.74
TCF4-246ENST00000570287 GNPATO15228 680 aa10.42□□□□□ -0.74
TCF4-246ENST00000570287 TBC1D12O60347 775 aa10.42□□□□□ -0.74
TCF4-246ENST00000570287 TBC1D2BQ9UPU7 963 aa10.42□□□□□ -0.74
TCF4-246ENST00000570287 LMTK2Q8IWU2 1503 aa10.42□□□□□ -0.74
TCF4-246ENST00000570287 SCAF11Q99590 1463 aaKnown RBP10.42□□□□□ -0.74
TCF4-246ENST00000570287 EFCAB6Q5THR3 1501 aa10.41□□□□□ -0.74
TCF4-246ENST00000570287 CSB-PGBD3P0DP91 1061 aa10.41□□□□□ -0.74
TCF4-246ENST00000570287 ZNF16P17020 682 aaPredicted RBP10.41□□□□□ -0.74
TCF4-246ENST00000570287 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.41□□□□□ -0.74
TCF4-246ENST00000570287 TCF3P15923 654 aa10.4□□□□□ -0.74
TCF4-246ENST00000570287 CABP2Q9NPB3 220 aa10.4□□□□□ -0.74
TCF4-246ENST00000570287 MS4A4AQ96JQ5 239 aa10.4□□□□□ -0.74
TCF4-246ENST00000570287 PHOX2BQ99453 314 aa10.4□□□□□ -0.74
TCF4-246ENST00000570287 PANK3Q9H999 370 aa10.4□□□□□ -0.74
TCF4-246ENST00000570287 INSRP06213 1382 aa10.4□□□□□ -0.74
TCF4-246ENST00000570287 MYOM2P54296 1465 aa10.4□□□□□ -0.75
TCF4-246ENST00000570287 ZMYM4Q5VZL5 1548 aa10.39□□□□□ -0.75
TCF4-246ENST00000570287 KIF1BO60333 1816 aa10.39□□□□□ -0.75
TCF4-246ENST00000570287 CD109Q6YHK3 1445 aa10.39□□□□□ -0.75
TCF4-246ENST00000570287 TMEM88BA6NKF7 163 aa10.39□□□□□ -0.75
TCF4-246ENST00000570287 PSEN1P49768 467 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms