RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 PEX14O75381 377 aa8.59□□□□□ -1.03
SMG1-217ENST00000569764 RETREG2Q8NC44 543 aa8.59□□□□□ -1.03
SMG1-217ENST00000569764 SPINK5Q9NQ38 1064 aaPredicted RBP8.59□□□□□ -1.03
SMG1-217ENST00000569764 RBM27Q9P2N5 1060 aaKnown RBP8.59□□□□□ -1.03
SMG1-217ENST00000569764 CPS1P31327 1500 aa8.59□□□□□ -1.03
SMG1-217ENST00000569764 DUOX2Q9NRD8 1548 aa8.59□□□□□ -1.03
SMG1-217ENST00000569764 RBM6P78332 1123 aaKnown RBP8.58□□□□□ -1.04
SMG1-217ENST00000569764 BCORL1Q5H9F3 1711 aa8.58□□□□□ -1.04
SMG1-217ENST00000569764 UNC13BO14795 1591 aa8.58□□□□□ -1.04
SMG1-217ENST00000569764 HECW2Q9P2P5 1572 aa8.58□□□□□ -1.04
SMG1-217ENST00000569764 CDCA7Q9BWT1 371 aaPredicted RBP8.58□□□□□ -1.04
SMG1-217ENST00000569764 SPATA31E1Q6ZUB1 1445 aa8.58□□□□□ -1.04
SMG1-217ENST00000569764 ATP7AQ04656 1500 aa8.58□□□□□ -1.04
SMG1-217ENST00000569764 FBXO31Q5XUX0 539 aaPredicted RBP8.58□□□□□ -1.04
SMG1-217ENST00000569764 TMC1Q8TDI8 760 aa8.58□□□□□ -1.04
SMG1-217ENST00000569764 CHRM1P11229 460 aaPredicted RBP8.57□□□□□ -1.04
SMG1-217ENST00000569764 C8orf37Q96NL8 207 aa8.57□□□□□ -1.04
SMG1-217ENST00000569764 RIPOR2Q9Y4F9 1068 aa8.57□□□□□ -1.04
SMG1-217ENST00000569764 ADAMTS2O95450 1211 aa8.57□□□□□ -1.04
SMG1-217ENST00000569764 MYH16Q9H6N6 1097 aa8.57□□□□□ -1.04
SMG1-217ENST00000569764 STK24Q9Y6E0 443 aa8.57□□□□□ -1.04
SMG1-217ENST00000569764 IDI1Q13907 227 aa8.56□□□□□ -1.04
SMG1-217ENST00000569764 RBM26Q5T8P6 1007 aaKnown RBP8.56□□□□□ -1.04
SMG1-217ENST00000569764 SGSM3Q96HU1 749 aa8.56□□□□□ -1.04
SMG1-217ENST00000569764 ZNF335Q9H4Z2 1342 aaPredicted RBP8.55□□□□□ -1.04
SMG1-217ENST00000569764 IQGAP3Q86VI3 1631 aa8.55□□□□□ -1.04
SMG1-217ENST00000569764 KIDINS220Q9ULH0 1771 aa8.55□□□□□ -1.04
SMG1-217ENST00000569764 POLD1P28340 1107 aa8.55□□□□□ -1.04
SMG1-217ENST00000569764 SCAF11Q99590 1463 aaKnown RBP8.55□□□□□ -1.04
SMG1-217ENST00000569764 MSH5O43196 834 aa8.54□□□□□ -1.04
SMG1-217ENST00000569764 INO80Q9ULG1 1556 aaPredicted RBP8.54□□□□□ -1.04
SMG1-217ENST00000569764 E9PCH4 1651 aa8.54□□□□□ -1.04
SMG1-217ENST00000569764 EVC2Q86UK5 1308 aa8.54□□□□□ -1.04
SMG1-217ENST00000569764 MAPK8IP2Q13387 824 aaPredicted RBP8.54□□□□□ -1.04
SMG1-217ENST00000569764 TMEM2Q9UHN6 1383 aa8.54□□□□□ -1.04
SMG1-217ENST00000569764 APBB1IPQ7Z5R6 666 aaPredicted RBP8.54□□□□□ -1.04
SMG1-217ENST00000569764 KCNH5Q8NCM2 988 aa8.54□□□□□ -1.04
SMG1-217ENST00000569764 RIMS2Q9UQ26 1411 aa8.53□□□□□ -1.04
SMG1-217ENST00000569764 MROH1Q8NDA8 1641 aa8.53□□□□□ -1.04
SMG1-217ENST00000569764 IRF5Q13568 498 aa8.53□□□□□ -1.04
SMG1-217ENST00000569764 GORABQ5T7V8 394 aa8.53□□□□□ -1.04
SMG1-217ENST00000569764 SPTY2D1Q68D10 685 aaPredicted RBP8.53□□□□□ -1.04
SMG1-217ENST00000569764 CFAP53Q96M91 514 aa8.53□□□□□ -1.04
SMG1-217ENST00000569764 PNNQ9H307 717 aaKnown RBP8.53□□□□□ -1.04
SMG1-217ENST00000569764 USP21Q9UK80 565 aa8.53□□□□□ -1.04
SMG1-217ENST00000569764 CCDC184Q52MB2 194 aa8.53□□□□□ -1.04
SMG1-217ENST00000569764 ANKRD62A6NC57 917 aa8.53□□□□□ -1.04
SMG1-217ENST00000569764 QTRT2Q9H974 415 aaKnown RBP8.53□□□□□ -1.04
SMG1-217ENST00000569764 PHF8Q9UPP1 1060 aa8.53□□□□□ -1.04
SMG1-217ENST00000569764 HSPA1LP34931 641 aa8.52□□□□□ -1.04
SMG1-217ENST00000569764 UGGT1Q9NYU2 1555 aa8.52□□□□□ -1.05
SMG1-217ENST00000569764 ARHGEF10O15013 1369 aa8.52□□□□□ -1.05
SMG1-217ENST00000569764 ATAD2Q6PL18 1390 aa8.52□□□□□ -1.05
SMG1-217ENST00000569764 NCOA3Q9Y6Q9 1424 aa8.52□□□□□ -1.05
SMG1-217ENST00000569764 KDM5CP41229 1560 aa8.52□□□□□ -1.05
SMG1-217ENST00000569764 DCAF11Q8TEB1 546 aa8.52□□□□□ -1.05
SMG1-217ENST00000569764 GTF2E1P29083 439 aaPredicted RBP8.51□□□□□ -1.05
SMG1-217ENST00000569764 ZMYM4Q5VZL5 1548 aa8.51□□□□□ -1.05
SMG1-217ENST00000569764 TMEM94Q12767 1356 aa8.51□□□□□ -1.05
SMG1-217ENST00000569764 CLGNO14967 610 aa8.51□□□□□ -1.05
SMG1-217ENST00000569764 DEPDC5O75140 1603 aa8.51□□□□□ -1.05
SMG1-217ENST00000569764 CFAP65Q6ZU64 1925 aaKnown RBP8.51□□□□□ -1.05
SMG1-217ENST00000569764 KAT6BQ8WYB5 2073 aa8.51□□□□□ -1.05
SMG1-217ENST00000569764 POLR1AO95602 1720 aaPredicted RBP8.5□□□□□ -1.05
SMG1-217ENST00000569764 TPD52L2O43399 206 aaKnown RBP8.5□□□□□ -1.05
SMG1-217ENST00000569764 NBPF1Q3BBV0 1214 aa8.5□□□□□ -1.05
SMG1-217ENST00000569764 KRT28Q7Z3Y7 464 aa8.5□□□□□ -1.05
SMG1-217ENST00000569764 AMPHP49418 695 aa8.5□□□□□ -1.05
SMG1-217ENST00000569764 ANKRD13AQ8IZ07 590 aa8.5□□□□□ -1.05
SMG1-217ENST00000569764 STK32BQ9NY57 414 aa8.5□□□□□ -1.05
SMG1-217ENST00000569764 KIF7Q2M1P5 1343 aa8.5□□□□□ -1.05
SMG1-217ENST00000569764 FRMPD1Q5SYB0 1578 aa8.5□□□□□ -1.05
SMG1-217ENST00000569764 MAP3K4Q9Y6R4 1608 aa8.5□□□□□ -1.05
SMG1-217ENST00000569764 NUDCQ9Y266 331 aa8.5□□□□□ -1.05
SMG1-217ENST00000569764 TMF1P82094 1093 aa8.49□□□□□ -1.05
SMG1-217ENST00000569764 ZC3H15Q8WU90 426 aaKnown RBP8.49□□□□□ -1.05
SMG1-217ENST00000569764 CCDC7Q96M83 1385 aa8.49□□□□□ -1.05
SMG1-217ENST00000569764 TRPM1Q7Z4N2 1603 aa8.49□□□□□ -1.05
SMG1-217ENST00000569764 SAFB2Q14151 953 aaKnown RBP eCLIP8.49□□□□□ -1.05
SMG1-217ENST00000569764 RAPGEF4Q8WZA2 1011 aa8.49□□□□□ -1.05
SMG1-217ENST00000569764 VWDEQ8N2E2 1590 aa8.48□□□□□ -1.05
SMG1-217ENST00000569764 PPME1Q9Y570 386 aa8.48□□□□□ -1.05
SMG1-217ENST00000569764 RIMS1Q86UR5 1692 aaKnown RBP8.48□□□□□ -1.05
SMG1-217ENST00000569764 TRAIPQ9BWF2 469 aa8.48□□□□□ -1.05
SMG1-217ENST00000569764 CLTCL1P53675 1640 aa8.48□□□□□ -1.05
SMG1-217ENST00000569764 PLEKHG1Q9ULL1 1385 aa8.47□□□□□ -1.05
SMG1-217ENST00000569764 CEP152O94986 1710 aa8.47□□□□□ -1.05
SMG1-217ENST00000569764 USP47Q96K76 1375 aa8.47□□□□□ -1.05
SMG1-217ENST00000569764 TOM1L2Q6ZVM7 507 aa8.47□□□□□ -1.05
SMG1-217ENST00000569764 ARMCX6Q7L4S7 300 aa8.47□□□□□ -1.05
SMG1-217ENST00000569764 MICAL1Q8TDZ2 1067 aa8.47□□□□□ -1.05
SMG1-217ENST00000569764 ABCA6Q8N139 1617 aa8.47□□□□□ -1.05
SMG1-217ENST00000569764 PHF14O94880 888 aa8.47□□□□□ -1.05
SMG1-217ENST00000569764 FOXD4Q12950 439 aaPredicted RBP8.47□□□□□ -1.05
SMG1-217ENST00000569764 ZNF622Q969S3 477 aaKnown RBP eCLIP8.47□□□□□ -1.05
SMG1-217ENST00000569764 RALGAPBQ86X10 1494 aa8.46□□□□□ -1.05
SMG1-217ENST00000569764 SPHKAPQ2M3C7 1700 aa8.46□□□□□ -1.05
SMG1-217ENST00000569764 PRAG1Q86YV5 1406 aa8.46□□□□□ -1.05
SMG1-217ENST00000569764 CARD11Q9BXL7 1154 aa8.46□□□□□ -1.05
SMG1-217ENST00000569764 HDAC5Q9UQL6 1122 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms