RNA–Protein interactions for RNA: ENST00000569603.1

LINC00556-201, long intergenic non-protein coding RNA 556, humanhuman

BASIC

Gene LINC00556, Length 412 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00556-201ENST00000569603 KCNV2Q8TDN2 545 aa9.95□□□□□ -0.82
LINC00556-201ENST00000569603 KIAA1107Q9UPP5 1409 aa9.95□□□□□ -0.82
LINC00556-201ENST00000569603 PLXNC1O60486 1568 aa9.95□□□□□ -0.82
LINC00556-201ENST00000569603 C3P01024 1663 aa9.95□□□□□ -0.82
LINC00556-201ENST00000569603 INO80Q9ULG1 1556 aaPredicted RBP9.94□□□□□ -0.82
LINC00556-201ENST00000569603 SYCP2Q9BX26 1530 aa9.94□□□□□ -0.82
LINC00556-201ENST00000569603 MLECQ14165 292 aa9.94□□□□□ -0.82
LINC00556-201ENST00000569603 PPP1R18Q6NYC8 613 aa9.93□□□□□ -0.82
LINC00556-201ENST00000569603 FBXO41Q8TF61 875 aa9.93□□□□□ -0.82
LINC00556-201ENST00000569603 HDGFP51858 240 aaKnown RBP9.92□□□□□ -0.82
LINC00556-201ENST00000569603 NKX2-3Q8TAU0 364 aa9.92□□□□□ -0.82
LINC00556-201ENST00000569603 EYA1Q99502 592 aa9.92□□□□□ -0.82
LINC00556-201ENST00000569603 TIAM1Q13009 1591 aa9.92□□□□□ -0.82
LINC00556-201ENST00000569603 LCE2BO14633 110 aa9.91□□□□□ -0.82
LINC00556-201ENST00000569603 CEBPAP49715 358 aaPredicted RBP9.91□□□□□ -0.82
LINC00556-201ENST00000569603 LAPTM4AQ15012 233 aa9.91□□□□□ -0.82
LINC00556-201ENST00000569603 ARHGEF1Q92888 912 aaKnown RBP9.91□□□□□ -0.82
LINC00556-201ENST00000569603 PRKD2Q9BZL6 878 aa9.91□□□□□ -0.82
LINC00556-201ENST00000569603 MBD5Q9P267 1494 aa9.91□□□□□ -0.82
LINC00556-201ENST00000569603 MROH2AA6NES4 1674 aa9.9□□□□□ -0.82
LINC00556-201ENST00000569603 COPS2P61201 443 aa9.9□□□□□ -0.82
LINC00556-201ENST00000569603 SLF2Q8IX21 1173 aa9.9□□□□□ -0.82
LINC00556-201ENST00000569603 ATP7AQ04656 1500 aa9.9□□□□□ -0.82
LINC00556-201ENST00000569603 PLEKHH2Q8IVE3 1493 aa9.9□□□□□ -0.83
LINC00556-201ENST00000569603 EHBP1L1Q8N3D4 1523 aa9.89□□□□□ -0.83
LINC00556-201ENST00000569603 CEP162Q5TB80 1403 aa9.89□□□□□ -0.83
LINC00556-201ENST00000569603 CNTLNQ9NXG0 1405 aa9.89□□□□□ -0.83
LINC00556-201ENST00000569603 PRKCSHP14314 528 aaPredicted RBP9.88□□□□□ -0.83
LINC00556-201ENST00000569603 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.88□□□□□ -0.83
LINC00556-201ENST00000569603 UHRF1BP1Q6BDS2 1440 aa9.88□□□□□ -0.83
LINC00556-201ENST00000569603 GFRA3O60609 400 aa9.87□□□□□ -0.83
LINC00556-201ENST00000569603 PTGDRQ13258 359 aa9.87□□□□□ -0.83
LINC00556-201ENST00000569603 NPATQ14207 1427 aa9.87□□□□□ -0.83
LINC00556-201ENST00000569603 HNRNPMP52272 730 aaKnown RBP eCLIP9.86□□□□□ -0.83
LINC00556-201ENST00000569603 SUPT6HQ7KZ85 1726 aaKnown RBP9.86□□□□□ -0.83
LINC00556-201ENST00000569603 ADGBQ8N7X0 1667 aa9.86□□□□□ -0.83
LINC00556-201ENST00000569603 CCNB3Q8WWL7 1395 aa9.86□□□□□ -0.83
LINC00556-201ENST00000569603 A2MP01023 1474 aa9.85□□□□□ -0.83
LINC00556-201ENST00000569603 SPAG9O60271 1321 aaKnown RBP9.85□□□□□ -0.83
LINC00556-201ENST00000569603 ZNF644Q9H582 1327 aaPredicted RBP9.85□□□□□ -0.83
LINC00556-201ENST00000569603 NCOA1Q15788 1441 aa9.85□□□□□ -0.83
LINC00556-201ENST00000569603 NECTIN2Q92692 538 aa9.85□□□□□ -0.83
LINC00556-201ENST00000569603 CFDP1Q9UEE9 299 aaPredicted RBP9.85□□□□□ -0.83
LINC00556-201ENST00000569603 MTUS2Q5JR59 1369 aa9.85□□□□□ -0.83
LINC00556-201ENST00000569603 ZNF142P52746 1687 aaPredicted RBP9.84□□□□□ -0.83
LINC00556-201ENST00000569603 RTEL1-TNFRSF6BF6WH68 1400 aa9.84□□□□□ -0.83
LINC00556-201ENST00000569603 PTPRTO14522 1441 aa9.84□□□□□ -0.83
LINC00556-201ENST00000569603 FAM161AQ3B820 660 aa9.84□□□□□ -0.83
LINC00556-201ENST00000569603 V9GY48 417 aaPredicted RBP9.84□□□□□ -0.83
LINC00556-201ENST00000569603 LTBP4Q8N2S1 1624 aa9.84□□□□□ -0.83
LINC00556-201ENST00000569603 NCOA2Q15596 1464 aa9.84□□□□□ -0.83
LINC00556-201ENST00000569603 CLTCQ00610 1675 aaKnown RBP9.83□□□□□ -0.84
LINC00556-201ENST00000569603 PTPRKQ15262 1439 aa9.83□□□□□ -0.84
LINC00556-201ENST00000569603 ZNF777Q9ULD5 760 aaPredicted RBP9.83□□□□□ -0.84
LINC00556-201ENST00000569603 ADGRG1Q9Y653 693 aa9.83□□□□□ -0.84
LINC00556-201ENST00000569603 ZMYM3Q14202 1370 aa9.83□□□□□ -0.84
LINC00556-201ENST00000569603 ZPR1O75312 459 aa9.82□□□□□ -0.84
LINC00556-201ENST00000569603 DNAJB2P25686 324 aa9.82□□□□□ -0.84
LINC00556-201ENST00000569603 MYO3AQ8NEV4 1616 aa9.82□□□□□ -0.84
LINC00556-201ENST00000569603 ARHGEF5Q12774 1597 aa9.81□□□□□ -0.84
LINC00556-201ENST00000569603 BLOC1S3Q6QNY0 202 aa9.81□□□□□ -0.84
LINC00556-201ENST00000569603 TMEM134Q9H6X4 195 aa9.81□□□□□ -0.84
LINC00556-201ENST00000569603 PCDHB3Q9Y5E6 796 aa9.81□□□□□ -0.84
LINC00556-201ENST00000569603 CAMSAP2Q08AD1 1489 aa9.8□□□□□ -0.84
LINC00556-201ENST00000569603 TCOF1Q13428 1488 aaKnown RBP9.8□□□□□ -0.84
LINC00556-201ENST00000569603 DHX29Q7Z478 1369 aaKnown RBP9.8□□□□□ -0.84
LINC00556-201ENST00000569603 NUTM2FA1L443 756 aa9.8□□□□□ -0.84
LINC00556-201ENST00000569603 CAMSAP1Q5T5Y3 1602 aa9.8□□□□□ -0.84
LINC00556-201ENST00000569603 FAM135AQ9P2D6 1515 aa9.8□□□□□ -0.84
LINC00556-201ENST00000569603 VPS8Q8N3P4 1428 aa9.8□□□□□ -0.84
LINC00556-201ENST00000569603 CEP170BQ9Y4F5 1589 aaPredicted RBP9.8□□□□□ -0.84
LINC00556-201ENST00000569603 PLA2R1Q13018 1463 aa9.79□□□□□ -0.84
LINC00556-201ENST00000569603 CCDC141Q6ZP82 1450 aa9.79□□□□□ -0.84
LINC00556-201ENST00000569603 MAP3K1Q13233 1512 aa9.79□□□□□ -0.84
LINC00556-201ENST00000569603 NRG2O14511 850 aaPredicted RBP9.79□□□□□ -0.84
LINC00556-201ENST00000569603 TLL1O43897 1013 aa9.79□□□□□ -0.84
LINC00556-201ENST00000569603 SLC4A3P48751 1232 aa9.79□□□□□ -0.84
LINC00556-201ENST00000569603 TRAF7Q6Q0C0 670 aa9.79□□□□□ -0.84
LINC00556-201ENST00000569603 RBM46Q8TBY0 533 aaKnown RBP9.79□□□□□ -0.84
LINC00556-201ENST00000569603 LRRC9Q6ZRR7 1453 aa9.79□□□□□ -0.84
LINC00556-201ENST00000569603 RCCD1A6NED2 376 aa9.78□□□□□ -0.84
LINC00556-201ENST00000569603 SEMA3EO15041 775 aa9.78□□□□□ -0.84
LINC00556-201ENST00000569603 MAST1Q9Y2H9 1570 aa9.77□□□□□ -0.85
LINC00556-201ENST00000569603 PRR14Q9BWN1 585 aa9.77□□□□□ -0.85
LINC00556-201ENST00000569603 TIMELESSQ9UNS1 1208 aa9.77□□□□□ -0.85
LINC00556-201ENST00000569603 IQSEC2Q5JU85 1478 aa9.77□□□□□ -0.85
LINC00556-201ENST00000569603 RNF17Q9BXT8 1623 aaKnown RBP9.76□□□□□ -0.85
LINC00556-201ENST00000569603 GGCXP38435 758 aa9.76□□□□□ -0.85
LINC00556-201ENST00000569603 PZPP20742 1482 aa9.76□□□□□ -0.85
LINC00556-201ENST00000569603 DNMT1P26358 1616 aaKnown RBP9.75□□□□□ -0.85
LINC00556-201ENST00000569603 MROH1Q8NDA8 1641 aa9.75□□□□□ -0.85
LINC00556-201ENST00000569603 A2ML1A8K2U0 1454 aa9.75□□□□□ -0.85
LINC00556-201ENST00000569603 EMID1Q96A84 441 aaPredicted RBP9.75□□□□□ -0.85
LINC00556-201ENST00000569603 KDM5DQ9BY66 1539 aa9.75□□□□□ -0.85
LINC00556-201ENST00000569603 NEURL4Q96JN8 1562 aa9.75□□□□□ -0.85
LINC00556-201ENST00000569603 LOC105371045A0A1W2PR82 267 aa9.74□□□□□ -0.85
LINC00556-201ENST00000569603 RNF223E7ERA6 249 aa9.74□□□□□ -0.85
LINC00556-201ENST00000569603 CFHP08603 1231 aa9.74□□□□□ -0.85
LINC00556-201ENST00000569603 SLC10A3P09131 477 aa9.74□□□□□ -0.85
LINC00556-201ENST00000569603 RSPH4AQ5TD94 716 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms