RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 PDE3BQ13370 1112 aa29.96■■■□□ 2.39
VCPKMT-205ENST00000569518 PNPLA6Q8IY17 1366 aa29.96■■■□□ 2.39
VCPKMT-205ENST00000569518 TTC21BQ7Z4L5 1316 aa29.95■■■□□ 2.38
VCPKMT-205ENST00000569518 SALL2Q9Y467 1007 aaPredicted RBP29.94■■■□□ 2.38
VCPKMT-205ENST00000569518 AATKQ6ZMQ8 1374 aa29.93■■■□□ 2.38
VCPKMT-205ENST00000569518 LMTK3Q96Q04 1460 aa29.93■■■□□ 2.38
VCPKMT-205ENST00000569518 ZRANB1Q9UGI0 708 aa29.93■■■□□ 2.38
VCPKMT-205ENST00000569518 SUPT16HQ9Y5B9 1047 aaKnown RBP29.93■■■□□ 2.38
VCPKMT-205ENST00000569518 MAP2P11137 1827 aaKnown RBP29.93■■■□□ 2.38
VCPKMT-205ENST00000569518 CCDC146Q8IYE0 955 aa29.92■■■□□ 2.38
VCPKMT-205ENST00000569518 OVOS2A0A0J9YW53 1432 aa29.91■■■□□ 2.38
VCPKMT-205ENST00000569518 OVOS2Q6IE36 1432 aa29.91■■■□□ 2.38
VCPKMT-205ENST00000569518 ZNF521Q96K83 1311 aa29.9■■■□□ 2.38
VCPKMT-205ENST00000569518 COG3Q96JB2 828 aa29.9■■■□□ 2.38
VCPKMT-205ENST00000569518 PMFBP1Q8TBY8 1022 aa29.89■■■□□ 2.38
VCPKMT-205ENST00000569518 POLKQ9UBT6 870 aa29.89■■■□□ 2.38
VCPKMT-205ENST00000569518 RBM33Q96EV2 1170 aaKnown RBP29.89■■■□□ 2.38
VCPKMT-205ENST00000569518 IQSEC2Q5JU85 1478 aa29.88■■■□□ 2.37
VCPKMT-205ENST00000569518 TTC21AQ8NDW8 1320 aa29.87■■■□□ 2.37
VCPKMT-205ENST00000569518 HSPA2P54652 639 aa29.87■■■□□ 2.37
VCPKMT-205ENST00000569518 STRCP1A6NGW2 1772 aa29.86■■■□□ 2.37
VCPKMT-205ENST00000569518 NEFLP07196 543 aa29.86■■■□□ 2.37
VCPKMT-205ENST00000569518 CDK12Q9NYV4 1490 aaPredicted RBP29.86■■■□□ 2.37
VCPKMT-205ENST00000569518 APAF1O14727 1248 aa29.85■■■□□ 2.37
VCPKMT-205ENST00000569518 NGDNQ8NEJ9 315 aaKnown RBP29.85■■■□□ 2.37
VCPKMT-205ENST00000569518 FKBP8Q14318 412 aa29.85■■■□□ 2.37
VCPKMT-205ENST00000569518 NGEFQ8N5V2 710 aa29.85■■■□□ 2.37
VCPKMT-205ENST00000569518 FBLN1P23142 703 aa29.84■■■□□ 2.37
VCPKMT-205ENST00000569518 PIK3C2AO00443 1686 aa29.83■■■□□ 2.37
VCPKMT-205ENST00000569518 CDCA7LQ96GN5 454 aa29.83■■■□□ 2.37
VCPKMT-205ENST00000569518 STRCQ7RTU9 1775 aa29.83■■■□□ 2.37
VCPKMT-205ENST00000569518 RUNDC1Q96C34 613 aa29.82■■■□□ 2.36
VCPKMT-205ENST00000569518 USP31Q70CQ4 1352 aa29.81■■■□□ 2.36
VCPKMT-205ENST00000569518 USP54Q70EL1 1684 aa29.81■■■□□ 2.36
VCPKMT-205ENST00000569518 DIAPH1O60610 1272 aaKnown RBP29.8■■■□□ 2.36
VCPKMT-205ENST00000569518 U2AF1L5P0DN76 240 aaPredicted RBP29.8■■■□□ 2.36
VCPKMT-205ENST00000569518 U2AF1Q01081 240 aaKnown RBP eCLIP29.8■■■□□ 2.36
VCPKMT-205ENST00000569518 EMILIN1Q9Y6C2 1016 aa29.8■■■□□ 2.36
VCPKMT-205ENST00000569518 PROSER2Q86WR7 435 aaPredicted RBP29.79■■■□□ 2.36
VCPKMT-205ENST00000569518 PHF8Q9UPP1 1060 aa29.78■■■□□ 2.36
VCPKMT-205ENST00000569518 RNF123Q5XPI4 1314 aa29.77■■■□□ 2.36
VCPKMT-205ENST00000569518 MARF1Q9Y4F3 1742 aaKnown RBP29.77■■■□□ 2.36
VCPKMT-205ENST00000569518 C14orf37Q86TY3 774 aa29.76■■■□□ 2.35
VCPKMT-205ENST00000569518 LRRC7Q96NW7 1537 aa29.75■■■□□ 2.35
VCPKMT-205ENST00000569518 NCOA3Q9Y6Q9 1424 aa29.74■■■□□ 2.35
VCPKMT-205ENST00000569518 U2SURPO15042 1029 aaKnown RBP29.73■■■□□ 2.35
VCPKMT-205ENST00000569518 PPM1GO15355 546 aaPredicted RBP29.73■■■□□ 2.35
VCPKMT-205ENST00000569518 TCP11L2Q8N4U5 519 aa29.73■■■□□ 2.35
VCPKMT-205ENST00000569518 GOLGA2Q08379 1002 aa29.73■■■□□ 2.35
VCPKMT-205ENST00000569518 RRS1Q15050 365 aaKnown RBP29.73■■■□□ 2.35
VCPKMT-205ENST00000569518 NCBP3Q53F19 620 aaKnown RBP29.72■■■□□ 2.35
VCPKMT-205ENST00000569518 PLEKHF1Q96S99 279 aa29.72■■■□□ 2.35
VCPKMT-205ENST00000569518 PHF23Q9BUL5 403 aaPredicted RBP29.72■■■□□ 2.35
VCPKMT-205ENST00000569518 PEAK1Q9H792 1746 aa29.72■■■□□ 2.35
VCPKMT-205ENST00000569518 C19orf44Q9H6X5 657 aa29.71■■■□□ 2.35
VCPKMT-205ENST00000569518 TMEM94Q12767 1356 aa29.7■■■□□ 2.35
VCPKMT-205ENST00000569518 DCCP43146 1447 aa29.69■■■□□ 2.34
VCPKMT-205ENST00000569518 IL13P35225 146 aa29.68■■■□□ 2.34
VCPKMT-205ENST00000569518 TRMT2AQ8IZ69 625 aaKnown RBP29.68■■■□□ 2.34
VCPKMT-205ENST00000569518 SLFN5Q08AF3 891 aa29.68■■■□□ 2.34
VCPKMT-205ENST00000569518 ESCO1Q5FWF5 840 aa29.68■■■□□ 2.34
VCPKMT-205ENST00000569518 DUSP27Q5VZP5 1158 aa29.68■■■□□ 2.34
VCPKMT-205ENST00000569518 WWC1Q8IX03 1113 aa29.68■■■□□ 2.34
VCPKMT-205ENST00000569518 KIF1AQ12756 1690 aa29.67■■■□□ 2.34
VCPKMT-205ENST00000569518 CCDC27Q2M243 656 aa29.66■■■□□ 2.34
VCPKMT-205ENST00000569518 C1orf167Q5SNV9 1468 aa29.66■■■□□ 2.34
VCPKMT-205ENST00000569518 RCAN3Q9UKA8 241 aa29.65■■■□□ 2.34
VCPKMT-205ENST00000569518 FCHSD2O94868 740 aa29.64■■■□□ 2.34
VCPKMT-205ENST00000569518 IRX6P78412 446 aaPredicted RBP29.64■■■□□ 2.34
VCPKMT-205ENST00000569518 RRP7AQ9Y3A4 280 aaKnown RBP29.64■■■□□ 2.34
VCPKMT-205ENST00000569518 XIRP1Q702N8 1843 aaKnown RBP29.64■■■□□ 2.33
VCPKMT-205ENST00000569518 DMRT2Q9Y5R5 561 aa29.64■■■□□ 2.33
VCPKMT-205ENST00000569518 ORAI2Q96SN7 254 aa29.63■■■□□ 2.33
VCPKMT-205ENST00000569518 SPINK5Q9NQ38 1064 aaPredicted RBP29.63■■■□□ 2.33
VCPKMT-205ENST00000569518 MST1RQ04912 1400 aa29.62■■■□□ 2.33
VCPKMT-205ENST00000569518 ERICH6BQ5W0A0 696 aa29.62■■■□□ 2.33
VCPKMT-205ENST00000569518 RSPH6AQ9H0K4 717 aa29.62■■■□□ 2.33
VCPKMT-205ENST00000569518 PNNQ9H307 717 aaKnown RBP29.62■■■□□ 2.33
VCPKMT-205ENST00000569518 NLRP6P59044 892 aa29.61■■■□□ 2.33
VCPKMT-205ENST00000569518 E9PSI1 815 aa29.61■■■□□ 2.33
VCPKMT-205ENST00000569518 MAP3K19Q56UN5 1328 aa29.6■■■□□ 2.33
VCPKMT-205ENST00000569518 RGPD1P0DJD0 1748 aa29.6■■■□□ 2.33
VCPKMT-205ENST00000569518 TRPM3Q9HCF6 1732 aaPredicted RBP29.59■■■□□ 2.33
VCPKMT-205ENST00000569518 NEUROD2Q15784 382 aa29.59■■■□□ 2.33
VCPKMT-205ENST00000569518 ABTB2Q8N961 1025 aa29.59■■■□□ 2.33
VCPKMT-205ENST00000569518 MAPK8IP3Q9UPT6 1336 aa29.59■■■□□ 2.33
VCPKMT-205ENST00000569518 PSME1Q06323 249 aa29.58■■■□□ 2.33
VCPKMT-205ENST00000569518 SBNO1A3KN83 1393 aa29.58■■■□□ 2.33
VCPKMT-205ENST00000569518 PAK3O75914 559 aaPredicted RBP29.57■■■□□ 2.32
VCPKMT-205ENST00000569518 TMPOP42166 694 aaKnown RBP29.57■■■□□ 2.32
VCPKMT-205ENST00000569518 WDR63Q8IWG1 891 aa29.57■■■□□ 2.32
VCPKMT-205ENST00000569518 FLT4P35916 1363 aa29.56■■■□□ 2.32
VCPKMT-205ENST00000569518 EIF4A2Q14240 407 aaKnown RBP29.56■■■□□ 2.32
VCPKMT-205ENST00000569518 ATF3P18847 181 aa29.55■■■□□ 2.32
VCPKMT-205ENST00000569518 KIF24Q5T7B8 1368 aa29.55■■■□□ 2.32
VCPKMT-205ENST00000569518 SOX12O15370 315 aa29.55■■■□□ 2.32
VCPKMT-205ENST00000569518 PRKAR2BP31323 418 aa29.55■■■□□ 2.32
VCPKMT-205ENST00000569518 RRP1P56182 461 aaKnown RBP29.54■■■□□ 2.32
VCPKMT-205ENST00000569518 NUTM2GQ5VZR2 741 aa29.54■■■□□ 2.32
VCPKMT-205ENST00000569518 NFAT5O94916 1531 aa29.53■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms