RNA–Protein interactions for RNA: ENST00000569446.2

SCRT1-201, Transcript of scratch family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCRT1, Length 3,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRT1-201ENST00000569446 ASXL2Q76L83 1435 aa25.36■■□□□ 1.65
SCRT1-201ENST00000569446 ATAD2Q6PL18 1390 aa25.36■■□□□ 1.65
SCRT1-201ENST00000569446 TRMT2AQ8IZ69 625 aaKnown RBP25.35■■□□□ 1.65
SCRT1-201ENST00000569446 OS9Q13438 667 aaPredicted RBP25.35■■□□□ 1.65
SCRT1-201ENST00000569446 POLR3AO14802 1390 aaPredicted RBP25.35■■□□□ 1.65
SCRT1-201ENST00000569446 RBM33Q96EV2 1170 aaKnown RBP25.34■■□□□ 1.65
SCRT1-201ENST00000569446 ABCC2Q92887 1545 aa25.34■■□□□ 1.65
SCRT1-201ENST00000569446 EIF2S2P20042 333 aaKnown RBP25.34■■□□□ 1.65
SCRT1-201ENST00000569446 CHMP4BQ9H444 224 aaKnown RBP25.34■■□□□ 1.65
SCRT1-201ENST00000569446 TSHZ3Q63HK5 1081 aa25.33■■□□□ 1.65
SCRT1-201ENST00000569446 TRIM35Q9UPQ4 493 aa25.33■■□□□ 1.65
SCRT1-201ENST00000569446 MAST1Q9Y2H9 1570 aa25.33■■□□□ 1.65
SCRT1-201ENST00000569446 A0A1W2PP64 1363 aa25.32■■□□□ 1.64
SCRT1-201ENST00000569446 C16orf71Q8IYS4 520 aaPredicted RBP25.32■■□□□ 1.64
SCRT1-201ENST00000569446 ARHGEF5Q12774 1597 aa25.32■■□□□ 1.64
SCRT1-201ENST00000569446 F6X3S4 739 aa25.31■■□□□ 1.64
SCRT1-201ENST00000569446 AEBP1Q8IUX7 1158 aa25.31■■□□□ 1.64
SCRT1-201ENST00000569446 SLC52A1Q9NWF4 448 aa25.31■■□□□ 1.64
SCRT1-201ENST00000569446 SLC4A2P04920 1241 aa25.3■■□□□ 1.64
SCRT1-201ENST00000569446 PTPRTO14522 1441 aa25.3■■□□□ 1.64
SCRT1-201ENST00000569446 ERVK-7P63135 1459 aa25.29■■□□□ 1.64
SCRT1-201ENST00000569446 MCTP1Q6DN14 999 aa25.29■■□□□ 1.64
SCRT1-201ENST00000569446 C8orf58Q8NAV2 365 aa25.29■■□□□ 1.64
SCRT1-201ENST00000569446 STK31Q9BXU1 1019 aa25.29■■□□□ 1.64
SCRT1-201ENST00000569446 FCHSD2O94868 740 aa25.29■■□□□ 1.64
SCRT1-201ENST00000569446 FKBP5Q13451 457 aaPredicted RBP25.29■■□□□ 1.64
SCRT1-201ENST00000569446 MBIPQ9NS73 344 aa25.28■■□□□ 1.64
SCRT1-201ENST00000569446 NFE2L2Q16236 605 aa25.28■■□□□ 1.64
SCRT1-201ENST00000569446 TSPYL4Q9UJ04 414 aa25.28■■□□□ 1.64
SCRT1-201ENST00000569446 POLKQ9UBT6 870 aa25.28■■□□□ 1.64
SCRT1-201ENST00000569446 TRPM1Q7Z4N2 1603 aa25.27■■□□□ 1.64
SCRT1-201ENST00000569446 PRDM15P57071 1507 aaPredicted RBP25.27■■□□□ 1.64
SCRT1-201ENST00000569446 MPNDQ8N594 471 aa25.27■■□□□ 1.64
SCRT1-201ENST00000569446 PTMAP06454 111 aaKnown RBP25.27■■□□□ 1.64
SCRT1-201ENST00000569446 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.27■■□□□ 1.64
SCRT1-201ENST00000569446 NUDT16Q96DE0 195 aaKnown RBP25.26■■□□□ 1.63
SCRT1-201ENST00000569446 EIF2AK4Q9P2K8 1649 aaKnown RBP25.26■■□□□ 1.63
SCRT1-201ENST00000569446 LMOD3Q0VAK6 560 aa25.26■■□□□ 1.63
SCRT1-201ENST00000569446 API5Q9BZZ5 524 aaKnown RBP25.26■■□□□ 1.63
SCRT1-201ENST00000569446 RPGRIP1LQ68CZ1 1315 aa25.25■■□□□ 1.63
SCRT1-201ENST00000569446 EXOC6BQ9Y2D4 811 aa25.24■■□□□ 1.63
SCRT1-201ENST00000569446 CDC42BPBQ9Y5S2 1711 aa25.23■■□□□ 1.63
SCRT1-201ENST00000569446 RTEL1-TNFRSF6BF6WH68 1400 aa25.23■■□□□ 1.63
SCRT1-201ENST00000569446 DDX11L8A8MPP1 907 aa25.23■■□□□ 1.63
SCRT1-201ENST00000569446 ANO2Q9NQ90 1003 aa25.23■■□□□ 1.63
SCRT1-201ENST00000569446 ANKRD36BQ8N2N9 1353 aa25.23■■□□□ 1.63
SCRT1-201ENST00000569446 MAP4K4O95819 1239 aaPredicted RBP25.23■■□□□ 1.63
SCRT1-201ENST00000569446 CCDC9Q9Y3X0 531 aaKnown RBP25.23■■□□□ 1.63
SCRT1-201ENST00000569446 ADCY10Q96PN6 1610 aa25.23■■□□□ 1.63
SCRT1-201ENST00000569446 USP19O94966 1318 aa25.22■■□□□ 1.63
SCRT1-201ENST00000569446 TBC1D9Q6ZT07 1266 aa25.21■■□□□ 1.63
SCRT1-201ENST00000569446 CEBPAP49715 358 aaPredicted RBP25.21■■□□□ 1.63
SCRT1-201ENST00000569446 ZBTB40Q9NUA8 1239 aa25.2■■□□□ 1.63
SCRT1-201ENST00000569446 CROCC2H7BZ55 1655 aa25.2■■□□□ 1.63
SCRT1-201ENST00000569446 NINLQ9Y2I6 1382 aa25.2■■□□□ 1.62
SCRT1-201ENST00000569446 PREX2Q70Z35 1606 aa25.2■■□□□ 1.62
SCRT1-201ENST00000569446 INSRP06213 1382 aa25.2■■□□□ 1.62
SCRT1-201ENST00000569446 SSFA2P28290 1259 aa25.2■■□□□ 1.62
SCRT1-201ENST00000569446 CDC45O75419 566 aa25.19■■□□□ 1.62
SCRT1-201ENST00000569446 HSP90AB2PQ58FF8 381 aa25.19■■□□□ 1.62
SCRT1-201ENST00000569446 RNF214Q8ND24 703 aa25.19■■□□□ 1.62
SCRT1-201ENST00000569446 KCNJ4P48050 445 aa25.19■■□□□ 1.62
SCRT1-201ENST00000569446 OTUD7AQ8TE49 926 aaPredicted RBP25.19■■□□□ 1.62
SCRT1-201ENST00000569446 DTNBO60941 627 aa25.19■■□□□ 1.62
SCRT1-201ENST00000569446 AAMPQ13685 434 aa25.19■■□□□ 1.62
SCRT1-201ENST00000569446 TNPO1Q92973 898 aaKnown RBP25.19■■□□□ 1.62
SCRT1-201ENST00000569446 CHD1O14646 1710 aa25.18■■□□□ 1.62
SCRT1-201ENST00000569446 CAVIN1Q6NZI2 390 aaKnown RBP25.18■■□□□ 1.62
SCRT1-201ENST00000569446 NPATQ14207 1427 aa25.18■■□□□ 1.62
SCRT1-201ENST00000569446 NLRP6P59044 892 aa25.18■■□□□ 1.62
SCRT1-201ENST00000569446 HDGFP51858 240 aaKnown RBP25.17■■□□□ 1.62
SCRT1-201ENST00000569446 ATP7AQ04656 1500 aa25.17■■□□□ 1.62
SCRT1-201ENST00000569446 FOXO3O43524 673 aa25.17■■□□□ 1.62
SCRT1-201ENST00000569446 IL1RAPL2Q9NP60 686 aa25.17■■□□□ 1.62
SCRT1-201ENST00000569446 CCDC61Q9Y6R9 512 aa25.17■■□□□ 1.62
SCRT1-201ENST00000569446 DNTTIP2Q5QJE6 756 aaKnown RBP25.16■■□□□ 1.62
SCRT1-201ENST00000569446 HMMRO75330 724 aa25.16■■□□□ 1.62
SCRT1-201ENST00000569446 VAMP4O75379 141 aa25.16■■□□□ 1.62
SCRT1-201ENST00000569446 XRCC6P12956 609 aaKnown RBP eCLIP25.16■■□□□ 1.62
SCRT1-201ENST00000569446 LARP6Q9BRS8 491 aaKnown RBP25.16■■□□□ 1.62
SCRT1-201ENST00000569446 NPC1L1Q9UHC9 1359 aa25.16■■□□□ 1.62
SCRT1-201ENST00000569446 NEK4P51957 841 aa25.15■■□□□ 1.62
SCRT1-201ENST00000569446 ST18O60284 1047 aa25.15■■□□□ 1.62
SCRT1-201ENST00000569446 CCDC27Q2M243 656 aa25.15■■□□□ 1.62
SCRT1-201ENST00000569446 USHBP1Q8N6Y0 703 aa25.15■■□□□ 1.62
SCRT1-201ENST00000569446 NUCB1Q02818 461 aa25.14■■□□□ 1.61
SCRT1-201ENST00000569446 GCC1Q96CN9 775 aa25.14■■□□□ 1.61
SCRT1-201ENST00000569446 PRPF40AO75400 957 aaKnown RBP25.14■■□□□ 1.61
SCRT1-201ENST00000569446 CT47B1P0C2W7 299 aaPredicted RBP25.13■■□□□ 1.61
SCRT1-201ENST00000569446 MEIS3Q99687 375 aa25.13■■□□□ 1.61
SCRT1-201ENST00000569446 K7ELQ4 463 aaPredicted RBP25.12■■□□□ 1.61
SCRT1-201ENST00000569446 MSNP26038 577 aaKnown RBP25.12■■□□□ 1.61
SCRT1-201ENST00000569446 HDAC1Q13547 482 aaPredicted RBP25.12■■□□□ 1.61
SCRT1-201ENST00000569446 CHMP3Q9Y3E7 222 aa25.12■■□□□ 1.61
SCRT1-201ENST00000569446 WASLO00401 505 aaPredicted RBP25.11■■□□□ 1.61
SCRT1-201ENST00000569446 MYO5CQ9NQX4 1742 aa25.11■■□□□ 1.61
SCRT1-201ENST00000569446 A0A0G2JS52 829 aa25.11■■□□□ 1.61
SCRT1-201ENST00000569446 GRPEL1Q9HAV7 217 aa25.11■■□□□ 1.61
SCRT1-201ENST00000569446 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.1■■□□□ 1.61
SCRT1-201ENST00000569446 TRHP20396 242 aaPredicted RBP25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms