RNA–Protein interactions for RNA: ENST00000568890.5

CNEP1R1-210, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CNEP1R1, Length 1,992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-210ENST00000568890 TNS3Q68CZ2 1445 aa23.13■■□□□ 1.29
CNEP1R1-210ENST00000568890 TERF2IPQ9NYB0 399 aa23.13■■□□□ 1.29
CNEP1R1-210ENST00000568890 TTC21BQ7Z4L5 1316 aa23.13■■□□□ 1.29
CNEP1R1-210ENST00000568890 TRPM3Q9HCF6 1732 aaPredicted RBP23.12■■□□□ 1.29
CNEP1R1-210ENST00000568890 NINLQ9Y2I6 1382 aa23.12■■□□□ 1.29
CNEP1R1-210ENST00000568890 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.12■■□□□ 1.29
CNEP1R1-210ENST00000568890 NUTM2BA6NNL0 878 aaPredicted RBP23.11■■□□□ 1.29
CNEP1R1-210ENST00000568890 NUTM2EB1AL46 878 aaPredicted RBP23.11■■□□□ 1.29
CNEP1R1-210ENST00000568890 HDGFL2Q7Z4V5 671 aaPredicted RBP23.11■■□□□ 1.29
CNEP1R1-210ENST00000568890 NUTM2AQ8IVF1 878 aaPredicted RBP23.11■■□□□ 1.29
CNEP1R1-210ENST00000568890 ABTB2Q8N961 1025 aa23.11■■□□□ 1.29
CNEP1R1-210ENST00000568890 ZRANB1Q9UGI0 708 aa23.1■■□□□ 1.29
CNEP1R1-210ENST00000568890 ANKRD36BQ8N2N9 1353 aa23.1■■□□□ 1.29
CNEP1R1-210ENST00000568890 CCDC7Q96M83 1385 aa23.09■■□□□ 1.29
CNEP1R1-210ENST00000568890 PANK3Q9H999 370 aa23.08■■□□□ 1.29
CNEP1R1-210ENST00000568890 SPATA31A6Q5VVP1 1343 aa23.08■■□□□ 1.28
CNEP1R1-210ENST00000568890 LRP6O75581 1613 aa23.07■■□□□ 1.28
CNEP1R1-210ENST00000568890 MYOM1P52179 1685 aa23.07■■□□□ 1.28
CNEP1R1-210ENST00000568890 NME9Q86XW9 330 aa23.07■■□□□ 1.28
CNEP1R1-210ENST00000568890 ARHGEF10O15013 1369 aa23.06■■□□□ 1.28
CNEP1R1-210ENST00000568890 ALS2Q96Q42 1657 aa23.06■■□□□ 1.28
CNEP1R1-210ENST00000568890 BRD4O60885 1362 aaPredicted RBP23.05■■□□□ 1.28
CNEP1R1-210ENST00000568890 NLRP6P59044 892 aa23.05■■□□□ 1.28
CNEP1R1-210ENST00000568890 AKAP12Q02952 1782 aa23.05■■□□□ 1.28
CNEP1R1-210ENST00000568890 SHPRHQ149N8 1683 aa23.05■■□□□ 1.28
CNEP1R1-210ENST00000568890 ADAMTS2O95450 1211 aa23.04■■□□□ 1.28
CNEP1R1-210ENST00000568890 EDC4Q6P2E9 1401 aaKnown RBP23.04■■□□□ 1.28
CNEP1R1-210ENST00000568890 TTC21AQ8NDW8 1320 aa23.03■■□□□ 1.28
CNEP1R1-210ENST00000568890 FYB1O15117 783 aa23.02■■□□□ 1.28
CNEP1R1-210ENST00000568890 NLRP13Q86W25 1043 aa23.01■■□□□ 1.27
CNEP1R1-210ENST00000568890 COL22A1Q8NFW1 1626 aaPredicted RBP23.01■■□□□ 1.27
CNEP1R1-210ENST00000568890 MED1Q15648 1581 aaPredicted RBP23.01■■□□□ 1.27
CNEP1R1-210ENST00000568890 MON2Q7Z3U7 1717 aa23■■□□□ 1.27
CNEP1R1-210ENST00000568890 NRKQ7Z2Y5 1582 aa23■■□□□ 1.27
CNEP1R1-210ENST00000568890 USP19O94966 1318 aa22.99■■□□□ 1.27
CNEP1R1-210ENST00000568890 PER1O15534 1290 aaPredicted RBP22.99■■□□□ 1.27
CNEP1R1-210ENST00000568890 GCP02774 474 aa22.99■■□□□ 1.27
CNEP1R1-210ENST00000568890 NSD3Q9BZ95 1437 aa22.98■■□□□ 1.27
CNEP1R1-210ENST00000568890 PIK3C2AO00443 1686 aa22.98■■□□□ 1.27
CNEP1R1-210ENST00000568890 GGNBP2Q9H3C7 697 aa22.98■■□□□ 1.27
CNEP1R1-210ENST00000568890 FBLN1P23142 703 aa22.97■■□□□ 1.27
CNEP1R1-210ENST00000568890 RGS17Q9UGC6 210 aaPredicted RBP22.97■■□□□ 1.27
CNEP1R1-210ENST00000568890 USP31Q70CQ4 1352 aa22.96■■□□□ 1.27
CNEP1R1-210ENST00000568890 FAM83GA6ND36 823 aa22.96■■□□□ 1.27
CNEP1R1-210ENST00000568890 ZC3H6P61129 1189 aaKnown RBP22.96■■□□□ 1.27
CNEP1R1-210ENST00000568890 SOX12O15370 315 aa22.94■■□□□ 1.26
CNEP1R1-210ENST00000568890 HAP1P54257 671 aaPredicted RBP22.94■■□□□ 1.26
CNEP1R1-210ENST00000568890 C8orf37Q96NL8 207 aa22.94■■□□□ 1.26
CNEP1R1-210ENST00000568890 MEX3CQ5U5Q3 659 aaKnown RBP22.92■■□□□ 1.26
CNEP1R1-210ENST00000568890 NGLY1Q96IV0 654 aa22.92■■□□□ 1.26
CNEP1R1-210ENST00000568890 CHRNA2Q15822 529 aa22.91■■□□□ 1.26
CNEP1R1-210ENST00000568890 CRYBG1Q9Y4K1 1723 aa22.91■■□□□ 1.26
CNEP1R1-210ENST00000568890 OVOS2A0A0J9YW53 1432 aa22.91■■□□□ 1.26
CNEP1R1-210ENST00000568890 OVOS2Q6IE36 1432 aa22.91■■□□□ 1.26
CNEP1R1-210ENST00000568890 KIAA0232Q92628 1395 aa22.9■■□□□ 1.26
CNEP1R1-210ENST00000568890 AMER1Q5JTC6 1135 aaPredicted RBP22.9■■□□□ 1.26
CNEP1R1-210ENST00000568890 MARF1Q9Y4F3 1742 aaKnown RBP22.89■■□□□ 1.26
CNEP1R1-210ENST00000568890 FNBP4Q8N3X1 1017 aaPredicted RBP22.89■■□□□ 1.26
CNEP1R1-210ENST00000568890 COG3Q96JB2 828 aa22.89■■□□□ 1.26
CNEP1R1-210ENST00000568890 CGNL1Q0VF96 1302 aa22.89■■□□□ 1.26
CNEP1R1-210ENST00000568890 KNSTRNQ9Y448 316 aa22.89■■□□□ 1.25
CNEP1R1-210ENST00000568890 DDX10Q13206 875 aaKnown RBP22.88■■□□□ 1.25
CNEP1R1-210ENST00000568890 ABCA3Q99758 1704 aa22.88■■□□□ 1.25
CNEP1R1-210ENST00000568890 SLIT3O75094 1523 aa22.87■■□□□ 1.25
CNEP1R1-210ENST00000568890 AFF2P51816 1311 aa22.87■■□□□ 1.25
CNEP1R1-210ENST00000568890 ARHGEF25Q86VW2 580 aa22.87■■□□□ 1.25
CNEP1R1-210ENST00000568890 ZNF316A6NFI3 1004 aaPredicted RBP22.87■■□□□ 1.25
CNEP1R1-210ENST00000568890 PRDM11Q9NQV5 511 aa22.87■■□□□ 1.25
CNEP1R1-210ENST00000568890 KCNH5Q8NCM2 988 aa22.86■■□□□ 1.25
CNEP1R1-210ENST00000568890 AXIN2Q9Y2T1 843 aa22.85■■□□□ 1.25
CNEP1R1-210ENST00000568890 PHRF1Q9P1Y6 1649 aaKnown RBP22.84■■□□□ 1.25
CNEP1R1-210ENST00000568890 CPDO75976 1380 aa22.84■■□□□ 1.25
CNEP1R1-210ENST00000568890 BCL9LQ86UU0 1499 aa22.84■■□□□ 1.25
CNEP1R1-210ENST00000568890 ZBTB7CA1YPR0 619 aa22.83■■□□□ 1.24
CNEP1R1-210ENST00000568890 POTEAQ6S8J7 498 aa22.83■■□□□ 1.24
CNEP1R1-210ENST00000568890 BTG4Q9NY30 223 aa22.83■■□□□ 1.24
CNEP1R1-210ENST00000568890 NFAT5O94916 1531 aa22.83■■□□□ 1.24
CNEP1R1-210ENST00000568890 CNGB1Q14028 1251 aaPredicted RBP22.82■■□□□ 1.24
CNEP1R1-210ENST00000568890 USP21Q9UK80 565 aa22.82■■□□□ 1.24
CNEP1R1-210ENST00000568890 SLIT2O94813 1529 aa22.82■■□□□ 1.24
CNEP1R1-210ENST00000568890 RRS1Q15050 365 aaKnown RBP22.81■■□□□ 1.24
CNEP1R1-210ENST00000568890 TNNT2P45379 298 aaPredicted RBP22.81■■□□□ 1.24
CNEP1R1-210ENST00000568890 CC2D1BQ5T0F9 858 aaKnown RBP22.81■■□□□ 1.24
CNEP1R1-210ENST00000568890 PHF23Q9BUL5 403 aaPredicted RBP22.81■■□□□ 1.24
CNEP1R1-210ENST00000568890 USP54Q70EL1 1684 aa22.8■■□□□ 1.24
CNEP1R1-210ENST00000568890 MAP3K19Q56UN5 1328 aa22.79■■□□□ 1.24
CNEP1R1-210ENST00000568890 UNC5CLQ8IV45 518 aa22.79■■□□□ 1.24
CNEP1R1-210ENST00000568890 QTRT2Q9H974 415 aaKnown RBP22.78■■□□□ 1.24
CNEP1R1-210ENST00000568890 CAMTA1Q9Y6Y1 1673 aa22.78■■□□□ 1.24
CNEP1R1-210ENST00000568890 AATKQ6ZMQ8 1374 aa22.77■■□□□ 1.24
CNEP1R1-210ENST00000568890 ZNF772Q68DY9 489 aaPredicted RBP22.76■■□□□ 1.23
CNEP1R1-210ENST00000568890 MORC1Q86VD1 984 aa22.76■■□□□ 1.23
CNEP1R1-210ENST00000568890 EMILIN1Q9Y6C2 1016 aa22.76■■□□□ 1.23
CNEP1R1-210ENST00000568890 POLKQ9UBT6 870 aa22.75■■□□□ 1.23
CNEP1R1-210ENST00000568890 STRN4Q9NRL3 753 aa22.74■■□□□ 1.23
CNEP1R1-210ENST00000568890 KIF20BQ96Q89 1820 aa22.74■■□□□ 1.23
CNEP1R1-210ENST00000568890 NSD2O96028 1365 aa22.74■■□□□ 1.23
CNEP1R1-210ENST00000568890 NPC1L1Q9UHC9 1359 aa22.73■■□□□ 1.23
CNEP1R1-210ENST00000568890 LARP1Q6PKG0 1096 aaKnown RBP22.72■■□□□ 1.23
CNEP1R1-210ENST00000568890 IP6K1Q92551 441 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms