RNA–Protein interactions for RNA: ENST00000568591.5

PKD1-235, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-235ENST00000568591 FYB1O15117 783 aa23.29■■□□□ 1.32
PKD1-235ENST00000568591 MFAP1P55081 439 aaKnown RBP23.29■■□□□ 1.32
PKD1-235ENST00000568591 ABCC11Q96J66 1382 aa23.29■■□□□ 1.32
PKD1-235ENST00000568591 NPM1P06748 294 aaKnown RBP eCLIP23.28■■□□□ 1.32
PKD1-235ENST00000568591 TMEM57Q8N5G2 664 aa23.27■■□□□ 1.32
PKD1-235ENST00000568591 COL3A1P02461 1466 aaPredicted RBP23.26■■□□□ 1.31
PKD1-235ENST00000568591 RIPK4P57078 832 aa23.26■■□□□ 1.31
PKD1-235ENST00000568591 ATF7IPQ6VMQ6 1270 aa23.26■■□□□ 1.31
PKD1-235ENST00000568591 PRAM1Q96QH2 718 aa23.26■■□□□ 1.31
PKD1-235ENST00000568591 PUS7Q96PZ0 661 aaKnown RBP23.25■■□□□ 1.31
PKD1-235ENST00000568591 ARXQ96QS3 562 aa23.25■■□□□ 1.31
PKD1-235ENST00000568591 PIK3C2BO00750 1634 aa23.23■■□□□ 1.31
PKD1-235ENST00000568591 C22orf23Q9BZE7 217 aa23.23■■□□□ 1.31
PKD1-235ENST00000568591 CD163L1Q9NR16 1453 aa23.22■■□□□ 1.31
PKD1-235ENST00000568591 ZMYM3Q14202 1370 aa23.22■■□□□ 1.31
PKD1-235ENST00000568591 OSCARQ8IYS5 282 aa23.22■■□□□ 1.31
PKD1-235ENST00000568591 DDX19BQ9UMR2 479 aa23.22■■□□□ 1.31
PKD1-235ENST00000568591 HDAC1Q13547 482 aaPredicted RBP23.21■■□□□ 1.31
PKD1-235ENST00000568591 NCBP3Q53F19 620 aaKnown RBP23.21■■□□□ 1.31
PKD1-235ENST00000568591 CT47B1P0C2W7 299 aaPredicted RBP23.2■■□□□ 1.3
PKD1-235ENST00000568591 ZBTB40Q9NUA8 1239 aa23.19■■□□□ 1.3
PKD1-235ENST00000568591 DIAPH1O60610 1272 aaKnown RBP23.19■■□□□ 1.3
PKD1-235ENST00000568591 THUMPD2Q9BTF0 503 aaKnown RBP23.19■■□□□ 1.3
PKD1-235ENST00000568591 PTPRMP28827 1452 aa23.19■■□□□ 1.3
PKD1-235ENST00000568591 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.18■■□□□ 1.3
PKD1-235ENST00000568591 SMC5Q8IY18 1101 aa23.18■■□□□ 1.3
PKD1-235ENST00000568591 LNPKQ9C0E8 428 aa23.18■■□□□ 1.3
PKD1-235ENST00000568591 CABP1Q9NZU7 370 aa23.18■■□□□ 1.3
PKD1-235ENST00000568591 GZF1Q9H116 711 aaPredicted RBP23.17■■□□□ 1.3
PKD1-235ENST00000568591 TERF2IPQ9NYB0 399 aa23.17■■□□□ 1.3
PKD1-235ENST00000568591 FBXO31Q5XUX0 539 aaPredicted RBP23.16■■□□□ 1.3
PKD1-235ENST00000568591 MYO5BQ9ULV0 1848 aa23.16■■□□□ 1.3
PKD1-235ENST00000568591 CDK19Q9BWU1 502 aa23.15■■□□□ 1.3
PKD1-235ENST00000568591 PRKAR2BP31323 418 aa23.14■■□□□ 1.3
PKD1-235ENST00000568591 C1orf115Q9H7X2 142 aa23.14■■□□□ 1.3
PKD1-235ENST00000568591 YEATS2Q9ULM3 1422 aa23.14■■□□□ 1.3
PKD1-235ENST00000568591 DIP2CQ9Y2E4 1556 aa23.14■■□□□ 1.29
PKD1-235ENST00000568591 HMOX1P09601 288 aa23.13■■□□□ 1.29
PKD1-235ENST00000568591 PHACTR3Q96KR7 559 aa23.13■■□□□ 1.29
PKD1-235ENST00000568591 YTHDC2Q9H6S0 1430 aaKnown RBP23.13■■□□□ 1.29
PKD1-235ENST00000568591 ATAD2Q6PL18 1390 aa23.13■■□□□ 1.29
PKD1-235ENST00000568591 IL16Q14005 1332 aa23.12■■□□□ 1.29
PKD1-235ENST00000568591 CFAP74Q9C0B2 1584 aa23.11■■□□□ 1.29
PKD1-235ENST00000568591 ELL2O00472 640 aaPredicted RBP23.11■■□□□ 1.29
PKD1-235ENST00000568591 MCM4P33991 863 aa23.11■■□□□ 1.29
PKD1-235ENST00000568591 TSPYL6Q8N831 410 aa23.11■■□□□ 1.29
PKD1-235ENST00000568591 PNPLA6Q8IY17 1366 aa23.1■■□□□ 1.29
PKD1-235ENST00000568591 SLC52A1Q9NWF4 448 aa23.1■■□□□ 1.29
PKD1-235ENST00000568591 LRRC7Q96NW7 1537 aa23.1■■□□□ 1.29
PKD1-235ENST00000568591 NUCB1Q02818 461 aa23.1■■□□□ 1.29
PKD1-235ENST00000568591 WAPLQ7Z5K2 1190 aa23.1■■□□□ 1.29
PKD1-235ENST00000568591 RSPH6AQ9H0K4 717 aa23.1■■□□□ 1.29
PKD1-235ENST00000568591 HDGFL2Q7Z4V5 671 aaPredicted RBP23.09■■□□□ 1.29
PKD1-235ENST00000568591 POLKQ9UBT6 870 aa23.09■■□□□ 1.29
PKD1-235ENST00000568591 KIF16BQ96L93 1317 aa23.09■■□□□ 1.29
PKD1-235ENST00000568591 ZFYVE9O95405 1425 aa23.08■■□□□ 1.29
PKD1-235ENST00000568591 ARHGAP31Q2M1Z3 1444 aa23.08■■□□□ 1.28
PKD1-235ENST00000568591 IPO8O15397 1037 aaKnown RBP23.07■■□□□ 1.28
PKD1-235ENST00000568591 CHD1LQ86WJ1 897 aa23.07■■□□□ 1.28
PKD1-235ENST00000568591 ZNF692Q9BU19 519 aaPredicted RBP23.06■■□□□ 1.28
PKD1-235ENST00000568591 PANK2Q9BZ23 570 aa23.06■■□□□ 1.28
PKD1-235ENST00000568591 TMEM131LA2VDJ0 1609 aa23.06■■□□□ 1.28
PKD1-235ENST00000568591 FCHSD2O94868 740 aa23.06■■□□□ 1.28
PKD1-235ENST00000568591 CHMP5Q9NZZ3 219 aa23.06■■□□□ 1.28
PKD1-235ENST00000568591 EMILIN1Q9Y6C2 1016 aa23.06■■□□□ 1.28
PKD1-235ENST00000568591 FAM43AQ8N2R8 423 aa23.05■■□□□ 1.28
PKD1-235ENST00000568591 ZRANB1Q9UGI0 708 aa23.05■■□□□ 1.28
PKD1-235ENST00000568591 MED14O60244 1454 aa23.05■■□□□ 1.28
PKD1-235ENST00000568591 XRCC6P12956 609 aaKnown RBP eCLIP23.05■■□□□ 1.28
PKD1-235ENST00000568591 ANKRD26Q9UPS8 1709 aa23.04■■□□□ 1.28
PKD1-235ENST00000568591 ARHGEF40Q8TER5 1519 aa23.04■■□□□ 1.28
PKD1-235ENST00000568591 RRAGDQ9NQL2 400 aaPredicted RBP23.04■■□□□ 1.28
PKD1-235ENST00000568591 PPIP5K1Q6PFW1 1433 aa23.04■■□□□ 1.28
PKD1-235ENST00000568591 ALDH1L2Q3SY69 923 aa23.04■■□□□ 1.28
PKD1-235ENST00000568591 ANKRD45Q5TZF3 282 aa23.04■■□□□ 1.28
PKD1-235ENST00000568591 HSCBQ8IWL3 235 aa23.04■■□□□ 1.28
PKD1-235ENST00000568591 UBE2Q2Q8WVN8 375 aa23.04■■□□□ 1.28
PKD1-235ENST00000568591 ZBTB7BO15156 539 aaPredicted RBP23.03■■□□□ 1.28
PKD1-235ENST00000568591 VAMP4O75379 141 aa23.03■■□□□ 1.28
PKD1-235ENST00000568591 FAM135BQ49AJ0 1406 aa23.03■■□□□ 1.28
PKD1-235ENST00000568591 TRAK2O60296 914 aa23.02■■□□□ 1.27
PKD1-235ENST00000568591 SIRT2Q8IXJ6 389 aa23.02■■□□□ 1.27
PKD1-235ENST00000568591 CD2BP2O95400 341 aaKnown RBP23.01■■□□□ 1.27
PKD1-235ENST00000568591 MRPL50Q8N5N7 158 aaKnown RBP23.01■■□□□ 1.27
PKD1-235ENST00000568591 ALKQ9UM73 1620 aa23■■□□□ 1.27
PKD1-235ENST00000568591 NEO1Q92859 1461 aa23■■□□□ 1.27
PKD1-235ENST00000568591 RBM25P49756 843 aaKnown RBP23■■□□□ 1.27
PKD1-235ENST00000568591 FOXD4L1Q9NU39 408 aa23■■□□□ 1.27
PKD1-235ENST00000568591 STAG3Q9UJ98 1225 aa23■■□□□ 1.27
PKD1-235ENST00000568591 PREX1Q8TCU6 1659 aa23■■□□□ 1.27
PKD1-235ENST00000568591 NCKAP5LQ9HCH0 1330 aa23■■□□□ 1.27
PKD1-235ENST00000568591 CLTCQ00610 1675 aaKnown RBP23■■□□□ 1.27
PKD1-235ENST00000568591 EIF5BO60841 1220 aaKnown RBP23■■□□□ 1.27
PKD1-235ENST00000568591 L1TD1Q5T7N2 865 aaKnown RBP23■■□□□ 1.27
PKD1-235ENST00000568591 FAM83GA6ND36 823 aa22.99■■□□□ 1.27
PKD1-235ENST00000568591 NFE2L2Q16236 605 aa22.99■■□□□ 1.27
PKD1-235ENST00000568591 NME9Q86XW9 330 aa22.99■■□□□ 1.27
PKD1-235ENST00000568591 KIF2CQ99661 725 aa22.99■■□□□ 1.27
PKD1-235ENST00000568591 MBIPQ9NS73 344 aa22.99■■□□□ 1.27
PKD1-235ENST00000568591 FSD2A1L4K1 749 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms