RNA–Protein interactions for RNA: ENST00000568549.5

SCAPER-221, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 5

Gene SCAPER, Length 625 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-221ENST00000568549 PXDNQ92626 1479 aa10.57□□□□□ -0.72
SCAPER-221ENST00000568549 PSME1Q06323 249 aa10.57□□□□□ -0.72
SCAPER-221ENST00000568549 EDC4Q6P2E9 1401 aaKnown RBP10.57□□□□□ -0.72
SCAPER-221ENST00000568549 NSD3Q9BZ95 1437 aa10.57□□□□□ -0.72
SCAPER-221ENST00000568549 ALS2Q96Q42 1657 aa10.57□□□□□ -0.72
SCAPER-221ENST00000568549 ANKRD26Q9UPS8 1709 aa10.56□□□□□ -0.72
SCAPER-221ENST00000568549 DDX17Q92841 729 aaKnown RBP10.56□□□□□ -0.72
SCAPER-221ENST00000568549 PIK3C2AO00443 1686 aa10.56□□□□□ -0.72
SCAPER-221ENST00000568549 COL16A1Q07092 1604 aaPredicted RBP10.55□□□□□ -0.72
SCAPER-221ENST00000568549 BRD4O60885 1362 aaPredicted RBP10.55□□□□□ -0.72
SCAPER-221ENST00000568549 XPCQ01831 940 aaPredicted RBP10.55□□□□□ -0.72
SCAPER-221ENST00000568549 KRT28Q7Z3Y7 464 aa10.55□□□□□ -0.72
SCAPER-221ENST00000568549 CARD14Q9BXL6 1004 aa10.55□□□□□ -0.72
SCAPER-221ENST00000568549 SSH2Q76I76 1423 aa10.55□□□□□ -0.72
SCAPER-221ENST00000568549 PAK3O75914 559 aaPredicted RBP10.54□□□□□ -0.72
SCAPER-221ENST00000568549 SOS2Q07890 1332 aaPredicted RBP10.54□□□□□ -0.72
SCAPER-221ENST00000568549 TTC21BQ7Z4L5 1316 aa10.54□□□□□ -0.72
SCAPER-221ENST00000568549 USP54Q70EL1 1684 aa10.53□□□□□ -0.72
SCAPER-221ENST00000568549 SBNO1A3KN83 1393 aa10.53□□□□□ -0.72
SCAPER-221ENST00000568549 MARF1Q9Y4F3 1742 aaKnown RBP10.53□□□□□ -0.72
SCAPER-221ENST00000568549 TNS3Q68CZ2 1445 aa10.53□□□□□ -0.72
SCAPER-221ENST00000568549 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.53□□□□□ -0.72
SCAPER-221ENST00000568549 KNSTRNQ9Y448 316 aa10.53□□□□□ -0.72
SCAPER-221ENST00000568549 CGNL1Q0VF96 1302 aa10.53□□□□□ -0.72
SCAPER-221ENST00000568549 TTC21AQ8NDW8 1320 aa10.53□□□□□ -0.72
SCAPER-221ENST00000568549 PER1O15534 1290 aaPredicted RBP10.52□□□□□ -0.73
SCAPER-221ENST00000568549 RNF39Q9H2S5 420 aa10.52□□□□□ -0.73
SCAPER-221ENST00000568549 ABCA3Q99758 1704 aa10.51□□□□□ -0.73
SCAPER-221ENST00000568549 CRYBG1Q9Y4K1 1723 aa10.51□□□□□ -0.73
SCAPER-221ENST00000568549 SPATA31A3Q5VYP0 1347 aa10.51□□□□□ -0.73
SCAPER-221ENST00000568549 NSD2O96028 1365 aa10.51□□□□□ -0.73
SCAPER-221ENST00000568549 PHRF1Q9P1Y6 1649 aaKnown RBP10.51□□□□□ -0.73
SCAPER-221ENST00000568549 SHPRHQ149N8 1683 aa10.5□□□□□ -0.73
SCAPER-221ENST00000568549 LMOD2Q6P5Q4 547 aa10.5□□□□□ -0.73
SCAPER-221ENST00000568549 NME9Q86XW9 330 aa10.5□□□□□ -0.73
SCAPER-221ENST00000568549 ABTB2Q8N961 1025 aa10.5□□□□□ -0.73
SCAPER-221ENST00000568549 COL22A1Q8NFW1 1626 aaPredicted RBP10.5□□□□□ -0.73
SCAPER-221ENST00000568549 ARHGEF10O15013 1369 aa10.5□□□□□ -0.73
SCAPER-221ENST00000568549 MED1Q15648 1581 aaPredicted RBP10.49□□□□□ -0.73
SCAPER-221ENST00000568549 FYB1O15117 783 aa10.49□□□□□ -0.73
SCAPER-221ENST00000568549 AMER1Q5JTC6 1135 aaPredicted RBP10.49□□□□□ -0.73
SCAPER-221ENST00000568549 FBXO41Q8TF61 875 aa10.49□□□□□ -0.73
SCAPER-221ENST00000568549 LRRC59Q96AG4 307 aaKnown RBP10.49□□□□□ -0.73
SCAPER-221ENST00000568549 NPC1L1Q9UHC9 1359 aa10.49□□□□□ -0.73
SCAPER-221ENST00000568549 OVOS2A0A0J9YW53 1432 aa10.49□□□□□ -0.73
SCAPER-221ENST00000568549 OVOS2Q6IE36 1432 aa10.49□□□□□ -0.73
SCAPER-221ENST00000568549 NLRP6P59044 892 aa10.48□□□□□ -0.73
SCAPER-221ENST00000568549 CNGB1Q14028 1251 aaPredicted RBP10.48□□□□□ -0.73
SCAPER-221ENST00000568549 CC2D1BQ5T0F9 858 aaKnown RBP10.48□□□□□ -0.73
SCAPER-221ENST00000568549 NUTM2GQ5VZR2 741 aa10.48□□□□□ -0.73
SCAPER-221ENST00000568549 COG3Q96JB2 828 aa10.48□□□□□ -0.73
SCAPER-221ENST00000568549 GGNBP2Q9H3C7 697 aa10.48□□□□□ -0.73
SCAPER-221ENST00000568549 ZRANB1Q9UGI0 708 aa10.48□□□□□ -0.73
SCAPER-221ENST00000568549 MAP2P11137 1827 aaKnown RBP10.48□□□□□ -0.73
SCAPER-221ENST00000568549 USP31Q70CQ4 1352 aa10.48□□□□□ -0.73
SCAPER-221ENST00000568549 HSPA1LP34931 641 aa10.47□□□□□ -0.73
SCAPER-221ENST00000568549 NLRP13Q86W25 1043 aa10.47□□□□□ -0.73
SCAPER-221ENST00000568549 PNPLA6Q8IY17 1366 aa10.47□□□□□ -0.73
SCAPER-221ENST00000568549 SLIT3O75094 1523 aa10.47□□□□□ -0.73
SCAPER-221ENST00000568549 LTN1O94822 1766 aa10.47□□□□□ -0.73
SCAPER-221ENST00000568549 DIEXFQ68CQ4 756 aaKnown RBP10.46□□□□□ -0.73
SCAPER-221ENST00000568549 POTEHQ6S545 545 aa10.46□□□□□ -0.73
SCAPER-221ENST00000568549 JCADQ9P266 1359 aa10.45□□□□□ -0.74
SCAPER-221ENST00000568549 USP19O94966 1318 aa10.45□□□□□ -0.74
SCAPER-221ENST00000568549 PLEKHG5O94827 1062 aa10.45□□□□□ -0.74
SCAPER-221ENST00000568549 MORC1Q86VD1 984 aa10.45□□□□□ -0.74
SCAPER-221ENST00000568549 NFAT5O94916 1531 aa10.44□□□□□ -0.74
SCAPER-221ENST00000568549 PARD3Q8TEW0 1356 aa10.44□□□□□ -0.74
SCAPER-221ENST00000568549 SOX12O15370 315 aa10.43□□□□□ -0.74
SCAPER-221ENST00000568549 ANP32CO43423 234 aa10.43□□□□□ -0.74
SCAPER-221ENST00000568549 TNNT2P45379 298 aaPredicted RBP10.43□□□□□ -0.74
SCAPER-221ENST00000568549 HAP1P54257 671 aaPredicted RBP10.43□□□□□ -0.74
SCAPER-221ENST00000568549 KCNH5Q8NCM2 988 aa10.43□□□□□ -0.74
SCAPER-221ENST00000568549 CABLES1Q8TDN4 633 aa10.43□□□□□ -0.74
SCAPER-221ENST00000568549 GCP02774 474 aa10.42□□□□□ -0.74
SCAPER-221ENST00000568549 RALBP1Q15311 655 aa10.42□□□□□ -0.74
SCAPER-221ENST00000568549 PRKRIP1Q9H875 184 aaPredicted RBP10.42□□□□□ -0.74
SCAPER-221ENST00000568549 RGPD5Q99666 1765 aa10.42□□□□□ -0.74
SCAPER-221ENST00000568549 AATKQ6ZMQ8 1374 aa10.41□□□□□ -0.74
SCAPER-221ENST00000568549 PEAK1Q9H792 1746 aa10.41□□□□□ -0.74
SCAPER-221ENST00000568549 SPATA31A6Q5VVP1 1343 aa10.4□□□□□ -0.74
SCAPER-221ENST00000568549 COL18A1P39060 1754 aa10.39□□□□□ -0.75
SCAPER-221ENST00000568549 COL14A1Q05707 1796 aaKnown RBP10.39□□□□□ -0.75
SCAPER-221ENST00000568549 MYBBP1AQ9BQG0 1328 aaKnown RBP10.39□□□□□ -0.75
SCAPER-221ENST00000568549 PLCH1Q4KWH8 1693 aa10.39□□□□□ -0.75
SCAPER-221ENST00000568549 ZBTB7CA1YPR0 619 aa10.39□□□□□ -0.75
SCAPER-221ENST00000568549 NUTM2BA6NNL0 878 aaPredicted RBP10.39□□□□□ -0.75
SCAPER-221ENST00000568549 NUTM2EB1AL46 878 aaPredicted RBP10.39□□□□□ -0.75
SCAPER-221ENST00000568549 FBLN1P23142 703 aa10.39□□□□□ -0.75
SCAPER-221ENST00000568549 PPP2R1AP30153 589 aa10.39□□□□□ -0.75
SCAPER-221ENST00000568549 ZC3H6P61129 1189 aaKnown RBP10.39□□□□□ -0.75
SCAPER-221ENST00000568549 RRS1Q15050 365 aaKnown RBP10.39□□□□□ -0.75
SCAPER-221ENST00000568549 NUTM2AQ8IVF1 878 aaPredicted RBP10.39□□□□□ -0.75
SCAPER-221ENST00000568549 SMG6Q86US8 1419 aaKnown RBP10.39□□□□□ -0.75
SCAPER-221ENST00000568549 CPDO75976 1380 aa10.39□□□□□ -0.75
SCAPER-221ENST00000568549 KIAA0232Q92628 1395 aa10.39□□□□□ -0.75
SCAPER-221ENST00000568549 ABCC6O95255 1503 aa10.38□□□□□ -0.75
SCAPER-221ENST00000568549 LMO7Q8WWI1 1683 aa10.38□□□□□ -0.75
SCAPER-221ENST00000568549 LRP6O75581 1613 aa10.38□□□□□ -0.75
SCAPER-221ENST00000568549 MAP3K19Q56UN5 1328 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms