RNA–Protein interactions for RNA: ENST00000568535.1

BBS4-214, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 2

Gene BBS4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-214ENST00000568535 NCOA3Q9Y6Q9 1424 aa10.99□□□□□ -0.65
BBS4-214ENST00000568535 NKTRP30414 1462 aaKnown RBP10.99□□□□□ -0.65
BBS4-214ENST00000568535 TNNT2P45379 298 aaPredicted RBP10.98□□□□□ -0.65
BBS4-214ENST00000568535 COG3Q96JB2 828 aa10.98□□□□□ -0.65
BBS4-214ENST00000568535 C19orf44Q9H6X5 657 aa10.98□□□□□ -0.65
BBS4-214ENST00000568535 POLR3AO14802 1390 aaPredicted RBP10.98□□□□□ -0.65
BBS4-214ENST00000568535 ADGRL3Q9HAR2 1447 aa10.98□□□□□ -0.65
BBS4-214ENST00000568535 CDC42BPGQ6DT37 1551 aa10.98□□□□□ -0.65
BBS4-214ENST00000568535 RNF216Q9NWF9 866 aaPredicted RBP10.97□□□□□ -0.65
BBS4-214ENST00000568535 NWD1Q149M9 1564 aa10.97□□□□□ -0.65
BBS4-214ENST00000568535 ZBED9Q6R2W3 1325 aa10.96□□□□□ -0.65
BBS4-214ENST00000568535 TTC21AQ8NDW8 1320 aa10.96□□□□□ -0.65
BBS4-214ENST00000568535 MTHFSP49914 203 aa10.96□□□□□ -0.65
BBS4-214ENST00000568535 PMFBP1Q8TBY8 1022 aa10.96□□□□□ -0.65
BBS4-214ENST00000568535 TTC21BQ7Z4L5 1316 aa10.95□□□□□ -0.66
BBS4-214ENST00000568535 ATF3P18847 181 aa10.95□□□□□ -0.66
BBS4-214ENST00000568535 HOXD11P31277 338 aaPredicted RBP10.95□□□□□ -0.66
BBS4-214ENST00000568535 PHF8Q9UPP1 1060 aa10.95□□□□□ -0.66
BBS4-214ENST00000568535 NUDCQ9Y266 331 aa10.95□□□□□ -0.66
BBS4-214ENST00000568535 USP6P35125 1406 aa10.94□□□□□ -0.66
BBS4-214ENST00000568535 ESCO1Q5FWF5 840 aa10.94□□□□□ -0.66
BBS4-214ENST00000568535 POTEDQ86YR6 584 aa10.94□□□□□ -0.66
BBS4-214ENST00000568535 RBM33Q96EV2 1170 aaKnown RBP10.94□□□□□ -0.66
BBS4-214ENST00000568535 ADAMTS8Q9UP79 889 aa10.94□□□□□ -0.66
BBS4-214ENST00000568535 ITSN1Q15811 1721 aa10.93□□□□□ -0.66
BBS4-214ENST00000568535 ZNF335Q9H4Z2 1342 aaPredicted RBP10.93□□□□□ -0.66
BBS4-214ENST00000568535 PSME1Q06323 249 aa10.93□□□□□ -0.66
BBS4-214ENST00000568535 CADPS2Q86UW7 1296 aa10.93□□□□□ -0.66
BBS4-214ENST00000568535 NME9Q86XW9 330 aa10.93□□□□□ -0.66
BBS4-214ENST00000568535 NGEFQ8N5V2 710 aa10.93□□□□□ -0.66
BBS4-214ENST00000568535 PNNQ9H307 717 aaKnown RBP10.93□□□□□ -0.66
BBS4-214ENST00000568535 TMEM94Q12767 1356 aa10.92□□□□□ -0.66
BBS4-214ENST00000568535 AATKQ6ZMQ8 1374 aa10.92□□□□□ -0.66
BBS4-214ENST00000568535 TOPAZ1Q8N9V7 1692 aa10.92□□□□□ -0.66
BBS4-214ENST00000568535 FMN2Q9NZ56 1722 aa10.92□□□□□ -0.66
BBS4-214ENST00000568535 PDE3BQ13370 1112 aa10.91□□□□□ -0.66
BBS4-214ENST00000568535 DCCP43146 1447 aa10.91□□□□□ -0.66
BBS4-214ENST00000568535 MSH6P52701 1360 aa10.9□□□□□ -0.66
BBS4-214ENST00000568535 AKAP12Q02952 1782 aa10.9□□□□□ -0.66
BBS4-214ENST00000568535 MON2Q7Z3U7 1717 aa10.9□□□□□ -0.66
BBS4-214ENST00000568535 DIAPH1O60610 1272 aaKnown RBP10.9□□□□□ -0.66
BBS4-214ENST00000568535 RGS17Q9UGC6 210 aaPredicted RBP10.9□□□□□ -0.66
BBS4-214ENST00000568535 BLMP54132 1417 aaPredicted RBP10.9□□□□□ -0.66
BBS4-214ENST00000568535 SSH2Q76I76 1423 aa10.9□□□□□ -0.66
BBS4-214ENST00000568535 NALCNQ8IZF0 1738 aa10.89□□□□□ -0.67
BBS4-214ENST00000568535 KIF20BQ96Q89 1820 aa10.89□□□□□ -0.67
BBS4-214ENST00000568535 PPM1GO15355 546 aaPredicted RBP10.89□□□□□ -0.67
BBS4-214ENST00000568535 PAK3O75914 559 aaPredicted RBP10.89□□□□□ -0.67
BBS4-214ENST00000568535 POLKQ9UBT6 870 aa10.89□□□□□ -0.67
BBS4-214ENST00000568535 ANKRD26Q9UPS8 1709 aa10.89□□□□□ -0.67
BBS4-214ENST00000568535 USP31Q70CQ4 1352 aa10.89□□□□□ -0.67
BBS4-214ENST00000568535 TOM1O60784 492 aa10.88□□□□□ -0.67
BBS4-214ENST00000568535 U2AF1L5P0DN76 240 aaPredicted RBP10.88□□□□□ -0.67
BBS4-214ENST00000568535 NLRP6P59044 892 aa10.88□□□□□ -0.67
BBS4-214ENST00000568535 U2AF1Q01081 240 aaKnown RBP eCLIP10.88□□□□□ -0.67
BBS4-214ENST00000568535 ABTB2Q8N961 1025 aa10.88□□□□□ -0.67
BBS4-214ENST00000568535 PNPLA6Q8IY17 1366 aa10.88□□□□□ -0.67
BBS4-214ENST00000568535 U2SURPO15042 1029 aaKnown RBP10.87□□□□□ -0.67
BBS4-214ENST00000568535 NEFMP07197 916 aa10.87□□□□□ -0.67
BBS4-214ENST00000568535 RUNDC1Q96C34 613 aa10.87□□□□□ -0.67
BBS4-214ENST00000568535 ZRANB1Q9UGI0 708 aa10.87□□□□□ -0.67
BBS4-214ENST00000568535 C1orf167Q5SNV9 1468 aa10.87□□□□□ -0.67
BBS4-214ENST00000568535 OVOS2A0A0J9YW53 1432 aa10.86□□□□□ -0.67
BBS4-214ENST00000568535 OVOS2Q6IE36 1432 aa10.86□□□□□ -0.67
BBS4-214ENST00000568535 ORAI2Q96SN7 254 aa10.86□□□□□ -0.67
BBS4-214ENST00000568535 FOXO3O43524 673 aa10.85□□□□□ -0.67
BBS4-214ENST00000568535 KRT28Q7Z3Y7 464 aa10.85□□□□□ -0.67
BBS4-214ENST00000568535 KCNH5Q8NCM2 988 aa10.85□□□□□ -0.67
BBS4-214ENST00000568535 NRKQ7Z2Y5 1582 aa10.85□□□□□ -0.67
BBS4-214ENST00000568535 SMG6Q86US8 1419 aaKnown RBP10.84□□□□□ -0.67
BBS4-214ENST00000568535 APAF1O14727 1248 aa10.84□□□□□ -0.67
BBS4-214ENST00000568535 FCHSD2O94868 740 aa10.84□□□□□ -0.67
BBS4-214ENST00000568535 CCDC146Q8IYE0 955 aa10.84□□□□□ -0.67
BBS4-214ENST00000568535 SALL2Q9Y467 1007 aaPredicted RBP10.84□□□□□ -0.67
BBS4-214ENST00000568535 EMILIN1Q9Y6C2 1016 aa10.84□□□□□ -0.67
BBS4-214ENST00000568535 KIF24Q5T7B8 1368 aa10.84□□□□□ -0.67
BBS4-214ENST00000568535 LRRC7Q96NW7 1537 aa10.84□□□□□ -0.67
BBS4-214ENST00000568535 MST1RQ04912 1400 aa10.84□□□□□ -0.67
BBS4-214ENST00000568535 NPHP3Q7Z494 1330 aa10.84□□□□□ -0.67
BBS4-214ENST00000568535 MAPK8IP3Q9UPT6 1336 aa10.84□□□□□ -0.67
BBS4-214ENST00000568535 CDK12Q9NYV4 1490 aaPredicted RBP10.83□□□□□ -0.68
BBS4-214ENST00000568535 NEFLP07196 543 aa10.83□□□□□ -0.68
BBS4-214ENST00000568535 RRS1Q15050 365 aaKnown RBP10.83□□□□□ -0.68
BBS4-214ENST00000568535 POTEAQ6S8J7 498 aa10.83□□□□□ -0.68
BBS4-214ENST00000568535 GTF3C3Q9Y5Q9 886 aa10.83□□□□□ -0.68
BBS4-214ENST00000568535 RGPD8O14715 1765 aaPredicted RBP10.82□□□□□ -0.68
BBS4-214ENST00000568535 KIF1AQ12756 1690 aa10.82□□□□□ -0.68
BBS4-214ENST00000568535 FBLN1P23142 703 aa10.82□□□□□ -0.68
BBS4-214ENST00000568535 AMPHP49418 695 aa10.82□□□□□ -0.68
BBS4-214ENST00000568535 GOLGA2Q08379 1002 aa10.82□□□□□ -0.68
BBS4-214ENST00000568535 COL3A1P02461 1466 aaPredicted RBP10.81□□□□□ -0.68
BBS4-214ENST00000568535 STRCP1A6NGW2 1772 aa10.81□□□□□ -0.68
BBS4-214ENST00000568535 SOX12O15370 315 aa10.81□□□□□ -0.68
BBS4-214ENST00000568535 IL13P35225 146 aa10.81□□□□□ -0.68
BBS4-214ENST00000568535 LMOD2Q6P5Q4 547 aa10.81□□□□□ -0.68
BBS4-214ENST00000568535 TCP11L2Q8N4U5 519 aa10.81□□□□□ -0.68
BBS4-214ENST00000568535 SLAIN2Q9P270 581 aa10.81□□□□□ -0.68
BBS4-214ENST00000568535 SBNO1A3KN83 1393 aa10.8□□□□□ -0.68
BBS4-214ENST00000568535 FLT4P35916 1363 aa10.8□□□□□ -0.68
BBS4-214ENST00000568535 CCDC27Q2M243 656 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms