RNA–Protein interactions for RNA: ENST00000568413.1

RPAP1-211, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 3

Gene RPAP1, Length 586 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-211ENST00000568413 PLEKHG5O94827 1062 aa12.37□□□□□ -0.43
RPAP1-211ENST00000568413 RBM6P78332 1123 aaKnown RBP12.37□□□□□ -0.43
RPAP1-211ENST00000568413 TMC1Q8TDI8 760 aa12.37□□□□□ -0.43
RPAP1-211ENST00000568413 ZNF692Q9BU19 519 aaPredicted RBP12.37□□□□□ -0.43
RPAP1-211ENST00000568413 USP21Q9UK80 565 aa12.37□□□□□ -0.43
RPAP1-211ENST00000568413 KIF1AQ12756 1690 aa12.37□□□□□ -0.43
RPAP1-211ENST00000568413 ACEP12821 1306 aa12.37□□□□□ -0.43
RPAP1-211ENST00000568413 POLR3AO14802 1390 aaPredicted RBP12.35□□□□□ -0.43
RPAP1-211ENST00000568413 SLC12A5Q9H2X9 1139 aa12.35□□□□□ -0.43
RPAP1-211ENST00000568413 TERF2IPQ9NYB0 399 aa12.35□□□□□ -0.43
RPAP1-211ENST00000568413 ATRNO75882 1429 aa12.35□□□□□ -0.43
RPAP1-211ENST00000568413 NINLQ9Y2I6 1382 aa12.34□□□□□ -0.43
RPAP1-211ENST00000568413 HDGFL2Q7Z4V5 671 aaPredicted RBP12.34□□□□□ -0.43
RPAP1-211ENST00000568413 TOPAZ1Q8N9V7 1692 aa12.33□□□□□ -0.44
RPAP1-211ENST00000568413 POLR3GLQ9BT43 218 aa12.33□□□□□ -0.44
RPAP1-211ENST00000568413 BCL9LQ86UU0 1499 aa12.33□□□□□ -0.44
RPAP1-211ENST00000568413 SBNO1A3KN83 1393 aa12.32□□□□□ -0.44
RPAP1-211ENST00000568413 BRD4O60885 1362 aaPredicted RBP12.32□□□□□ -0.44
RPAP1-211ENST00000568413 ABCA3Q99758 1704 aa12.32□□□□□ -0.44
RPAP1-211ENST00000568413 C11orf95C9JLR9 678 aaPredicted RBP12.32□□□□□ -0.44
RPAP1-211ENST00000568413 PAK3O75914 559 aaPredicted RBP12.32□□□□□ -0.44
RPAP1-211ENST00000568413 FNBP4Q8N3X1 1017 aaPredicted RBP12.32□□□□□ -0.44
RPAP1-211ENST00000568413 TRPC5Q9UL62 973 aaPredicted RBP12.32□□□□□ -0.44
RPAP1-211ENST00000568413 SPATA31A3Q5VYP0 1347 aa12.32□□□□□ -0.44
RPAP1-211ENST00000568413 CABLES1Q8TDN4 633 aa12.31□□□□□ -0.44
RPAP1-211ENST00000568413 GLI3P10071 1580 aa12.3□□□□□ -0.44
RPAP1-211ENST00000568413 CPSF1Q10570 1443 aaKnown RBP12.3□□□□□ -0.44
RPAP1-211ENST00000568413 LMOD2Q6P5Q4 547 aa12.3□□□□□ -0.44
RPAP1-211ENST00000568413 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.3□□□□□ -0.44
RPAP1-211ENST00000568413 KIF7Q2M1P5 1343 aa12.3□□□□□ -0.44
RPAP1-211ENST00000568413 KTN1Q86UP2 1357 aaKnown RBP12.3□□□□□ -0.44
RPAP1-211ENST00000568413 PLCH1Q4KWH8 1693 aa12.29□□□□□ -0.44
RPAP1-211ENST00000568413 BRWD3Q6RI45 1802 aa12.29□□□□□ -0.44
RPAP1-211ENST00000568413 ARHGEF10O15013 1369 aa12.29□□□□□ -0.44
RPAP1-211ENST00000568413 USP6P35125 1406 aa12.28□□□□□ -0.44
RPAP1-211ENST00000568413 TNS3Q68CZ2 1445 aa12.28□□□□□ -0.44
RPAP1-211ENST00000568413 ABTB2Q8N961 1025 aa12.28□□□□□ -0.44
RPAP1-211ENST00000568413 TTC21BQ7Z4L5 1316 aa12.28□□□□□ -0.44
RPAP1-211ENST00000568413 TTC21AQ8NDW8 1320 aa12.28□□□□□ -0.44
RPAP1-211ENST00000568413 ANKRD36BQ8N2N9 1353 aa12.28□□□□□ -0.44
RPAP1-211ENST00000568413 SLIT2O94813 1529 aa12.27□□□□□ -0.44
RPAP1-211ENST00000568413 TRPM3Q9HCF6 1732 aaPredicted RBP12.27□□□□□ -0.45
RPAP1-211ENST00000568413 A0A1W2PP64 1363 aa12.27□□□□□ -0.45
RPAP1-211ENST00000568413 CCDC7Q96M83 1385 aa12.27□□□□□ -0.45
RPAP1-211ENST00000568413 CD163L1Q9NR16 1453 aa12.27□□□□□ -0.45
RPAP1-211ENST00000568413 AKAP12Q02952 1782 aa12.26□□□□□ -0.45
RPAP1-211ENST00000568413 HAP1P54257 671 aaPredicted RBP12.26□□□□□ -0.45
RPAP1-211ENST00000568413 NLRP13Q86W25 1043 aa12.26□□□□□ -0.45
RPAP1-211ENST00000568413 WASHC2AQ641Q2 1341 aa12.26□□□□□ -0.45
RPAP1-211ENST00000568413 EDC4Q6P2E9 1401 aaKnown RBP12.26□□□□□ -0.45
RPAP1-211ENST00000568413 SSH2Q76I76 1423 aa12.26□□□□□ -0.45
RPAP1-211ENST00000568413 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.25□□□□□ -0.45
RPAP1-211ENST00000568413 GJD4Q96KN9 370 aaPredicted RBP12.25□□□□□ -0.45
RPAP1-211ENST00000568413 PANK3Q9H999 370 aa12.25□□□□□ -0.45
RPAP1-211ENST00000568413 NLRP6P59044 892 aa12.24□□□□□ -0.45
RPAP1-211ENST00000568413 UNC5CLQ8IV45 518 aa12.24□□□□□ -0.45
RPAP1-211ENST00000568413 ALS2Q96Q42 1657 aa12.24□□□□□ -0.45
RPAP1-211ENST00000568413 NUTM2GQ5VZR2 741 aa12.23□□□□□ -0.45
RPAP1-211ENST00000568413 CARD14Q9BXL6 1004 aa12.23□□□□□ -0.45
RPAP1-211ENST00000568413 MON2Q7Z3U7 1717 aa12.23□□□□□ -0.45
RPAP1-211ENST00000568413 NRAPQ86VF7 1730 aa12.23□□□□□ -0.45
RPAP1-211ENST00000568413 NWD2Q9ULI1 1742 aa12.23□□□□□ -0.45
RPAP1-211ENST00000568413 EP400Q96L91 3159 aa12.22□□□□□ -0.45
RPAP1-211ENST00000568413 CRYBG1Q9Y4K1 1723 aa12.22□□□□□ -0.45
RPAP1-211ENST00000568413 MYOM1P52179 1685 aa12.22□□□□□ -0.45
RPAP1-211ENST00000568413 NME9Q86XW9 330 aa12.21□□□□□ -0.45
RPAP1-211ENST00000568413 CCDC9Q9Y3X0 531 aaKnown RBP12.21□□□□□ -0.45
RPAP1-211ENST00000568413 USP31Q70CQ4 1352 aa12.2□□□□□ -0.46
RPAP1-211ENST00000568413 CGNL1Q0VF96 1302 aa12.2□□□□□ -0.46
RPAP1-211ENST00000568413 FYB1O15117 783 aa12.2□□□□□ -0.46
RPAP1-211ENST00000568413 KCNH5Q8NCM2 988 aa12.2□□□□□ -0.46
RPAP1-211ENST00000568413 KNSTRNQ9Y448 316 aa12.2□□□□□ -0.46
RPAP1-211ENST00000568413 NSD3Q9BZ95 1437 aa12.2□□□□□ -0.46
RPAP1-211ENST00000568413 USP19O94966 1318 aa12.19□□□□□ -0.46
RPAP1-211ENST00000568413 FAM83GA6ND36 823 aa12.19□□□□□ -0.46
RPAP1-211ENST00000568413 ZNF316A6NFI3 1004 aaPredicted RBP12.19□□□□□ -0.46
RPAP1-211ENST00000568413 GCP02774 474 aa12.19□□□□□ -0.46
RPAP1-211ENST00000568413 SEPT12Q8IYM1 358 aa12.19□□□□□ -0.46
RPAP1-211ENST00000568413 COG3Q96JB2 828 aa12.19□□□□□ -0.46
RPAP1-211ENST00000568413 ZRANB1Q9UGI0 708 aa12.19□□□□□ -0.46
RPAP1-211ENST00000568413 NRKQ7Z2Y5 1582 aa12.18□□□□□ -0.46
RPAP1-211ENST00000568413 VPS72Q15906 364 aa12.18□□□□□ -0.46
RPAP1-211ENST00000568413 COL14A1Q05707 1796 aaKnown RBP12.18□□□□□ -0.46
RPAP1-211ENST00000568413 PIK3C2AO00443 1686 aa12.17□□□□□ -0.46
RPAP1-211ENST00000568413 A0A0G2JS52 829 aa12.17□□□□□ -0.46
RPAP1-211ENST00000568413 PER1O15534 1290 aaPredicted RBP12.17□□□□□ -0.46
RPAP1-211ENST00000568413 MYT1Q01538 1121 aa12.17□□□□□ -0.46
RPAP1-211ENST00000568413 DEFB132Q7Z7B7 95 aa12.17□□□□□ -0.46
RPAP1-211ENST00000568413 GGNBP2Q9H3C7 697 aa12.17□□□□□ -0.46
RPAP1-211ENST00000568413 PHRF1Q9P1Y6 1649 aaKnown RBP12.17□□□□□ -0.46
RPAP1-211ENST00000568413 ZC3H6P61129 1189 aaKnown RBP12.16□□□□□ -0.46
RPAP1-211ENST00000568413 BTG4Q9NY30 223 aa12.16□□□□□ -0.46
RPAP1-211ENST00000568413 DDX10Q13206 875 aaKnown RBP12.15□□□□□ -0.46
RPAP1-211ENST00000568413 FAM98CQ17RN3 349 aaKnown RBP12.15□□□□□ -0.46
RPAP1-211ENST00000568413 PRDM11Q9NQV5 511 aa12.15□□□□□ -0.46
RPAP1-211ENST00000568413 BLMP54132 1417 aaPredicted RBP12.14□□□□□ -0.47
RPAP1-211ENST00000568413 SOX12O15370 315 aa12.14□□□□□ -0.47
RPAP1-211ENST00000568413 AMER1Q5JTC6 1135 aaPredicted RBP12.14□□□□□ -0.47
RPAP1-211ENST00000568413 FAM182BQ5T319 152 aa12.14□□□□□ -0.47
RPAP1-211ENST00000568413 KRT27Q7Z3Y8 459 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms