RNA–Protein interactions for RNA: ENST00000568006.1

GBP3-211, Transcript of guanylate binding protein 3, humanhuman

TSL 5

Gene GBP3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBP3-211ENST00000568006 ABCA3Q99758 1704 aa10.54□□□□□ -0.72
GBP3-211ENST00000568006 MARF1Q9Y4F3 1742 aaKnown RBP10.54□□□□□ -0.72
GBP3-211ENST00000568006 POLR3AO14802 1390 aaPredicted RBP10.53□□□□□ -0.72
GBP3-211ENST00000568006 CRYBG1Q9Y4K1 1723 aa10.53□□□□□ -0.72
GBP3-211ENST00000568006 CDK19Q9BWU1 502 aa10.53□□□□□ -0.72
GBP3-211ENST00000568006 SPATA31A3Q5VYP0 1347 aa10.53□□□□□ -0.72
GBP3-211ENST00000568006 TNS3Q68CZ2 1445 aa10.52□□□□□ -0.73
GBP3-211ENST00000568006 ILDR2Q71H61 639 aa10.52□□□□□ -0.73
GBP3-211ENST00000568006 NUDT16Q96DE0 195 aaKnown RBP10.52□□□□□ -0.73
GBP3-211ENST00000568006 KRT28Q7Z3Y7 464 aa10.51□□□□□ -0.73
GBP3-211ENST00000568006 PLEKHG3A1L390 1219 aa10.5□□□□□ -0.73
GBP3-211ENST00000568006 XPCQ01831 940 aaPredicted RBP10.5□□□□□ -0.73
GBP3-211ENST00000568006 PMFBP1Q8TBY8 1022 aa10.5□□□□□ -0.73
GBP3-211ENST00000568006 CARD11Q9BXL7 1154 aa10.5□□□□□ -0.73
GBP3-211ENST00000568006 CCDC61Q9Y6R9 512 aa10.5□□□□□ -0.73
GBP3-211ENST00000568006 PSME1Q06323 249 aa10.49□□□□□ -0.73
GBP3-211ENST00000568006 ARHGEF10O15013 1369 aa10.49□□□□□ -0.73
GBP3-211ENST00000568006 AKAP12Q02952 1782 aa10.49□□□□□ -0.73
GBP3-211ENST00000568006 PPIP5K1Q6PFW1 1433 aa10.49□□□□□ -0.73
GBP3-211ENST00000568006 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.48□□□□□ -0.73
GBP3-211ENST00000568006 EVC2Q86UK5 1308 aa10.48□□□□□ -0.73
GBP3-211ENST00000568006 NRKQ7Z2Y5 1582 aa10.48□□□□□ -0.73
GBP3-211ENST00000568006 POTEAQ6S8J7 498 aa10.47□□□□□ -0.73
GBP3-211ENST00000568006 CABP2Q9NPB3 220 aa10.47□□□□□ -0.73
GBP3-211ENST00000568006 ACEP12821 1306 aa10.47□□□□□ -0.73
GBP3-211ENST00000568006 BRD4O60885 1362 aaPredicted RBP10.47□□□□□ -0.73
GBP3-211ENST00000568006 SSH2Q76I76 1423 aa10.47□□□□□ -0.73
GBP3-211ENST00000568006 PHRF1Q9P1Y6 1649 aaKnown RBP10.47□□□□□ -0.73
GBP3-211ENST00000568006 NUTM2BA6NNL0 878 aaPredicted RBP10.46□□□□□ -0.73
GBP3-211ENST00000568006 NUTM2EB1AL46 878 aaPredicted RBP10.46□□□□□ -0.73
GBP3-211ENST00000568006 SRPK2P78362 688 aaKnown RBP10.46□□□□□ -0.73
GBP3-211ENST00000568006 NUTM2AQ8IVF1 878 aaPredicted RBP10.46□□□□□ -0.73
GBP3-211ENST00000568006 TESK2Q96S53 571 aa10.46□□□□□ -0.73
GBP3-211ENST00000568006 ATAD2Q6PL18 1390 aa10.46□□□□□ -0.74
GBP3-211ENST00000568006 MON2Q7Z3U7 1717 aa10.46□□□□□ -0.74
GBP3-211ENST00000568006 SLIT2O94813 1529 aa10.45□□□□□ -0.74
GBP3-211ENST00000568006 USP6P35125 1406 aa10.45□□□□□ -0.74
GBP3-211ENST00000568006 CPSF1Q10570 1443 aaKnown RBP10.45□□□□□ -0.74
GBP3-211ENST00000568006 FNBP4Q8N3X1 1017 aaPredicted RBP10.45□□□□□ -0.74
GBP3-211ENST00000568006 NGDNQ8NEJ9 315 aaKnown RBP10.45□□□□□ -0.74
GBP3-211ENST00000568006 PUS7Q96PZ0 661 aaKnown RBP10.45□□□□□ -0.74
GBP3-211ENST00000568006 NWD2Q9ULI1 1742 aa10.44□□□□□ -0.74
GBP3-211ENST00000568006 PLCH1Q4KWH8 1693 aa10.44□□□□□ -0.74
GBP3-211ENST00000568006 CD163L1Q9NR16 1453 aa10.44□□□□□ -0.74
GBP3-211ENST00000568006 USP47Q96K76 1375 aa10.44□□□□□ -0.74
GBP3-211ENST00000568006 AFF2P51816 1311 aa10.44□□□□□ -0.74
GBP3-211ENST00000568006 MEX3CQ5U5Q3 659 aaKnown RBP10.44□□□□□ -0.74
GBP3-211ENST00000568006 ZNF772Q68DY9 489 aaPredicted RBP10.44□□□□□ -0.74
GBP3-211ENST00000568006 USP54Q70EL1 1684 aa10.44□□□□□ -0.74
GBP3-211ENST00000568006 BCL9LQ86UU0 1499 aa10.43□□□□□ -0.74
GBP3-211ENST00000568006 CDK12Q9NYV4 1490 aaPredicted RBP10.43□□□□□ -0.74
GBP3-211ENST00000568006 ST20-MTHFSA0A0A6YYL1 179 aa10.43□□□□□ -0.74
GBP3-211ENST00000568006 CABP1Q9NZU7 370 aa10.43□□□□□ -0.74
GBP3-211ENST00000568006 NRAPQ86VF7 1730 aa10.43□□□□□ -0.74
GBP3-211ENST00000568006 PIK3C2AO00443 1686 aa10.43□□□□□ -0.74
GBP3-211ENST00000568006 ADAMTS2O95450 1211 aa10.42□□□□□ -0.74
GBP3-211ENST00000568006 C8orf37Q96NL8 207 aa10.42□□□□□ -0.74
GBP3-211ENST00000568006 SLIT3O75094 1523 aa10.42□□□□□ -0.74
GBP3-211ENST00000568006 COL14A1Q05707 1796 aaKnown RBP10.42□□□□□ -0.74
GBP3-211ENST00000568006 ATRNO75882 1429 aa10.41□□□□□ -0.74
GBP3-211ENST00000568006 USP19O94966 1318 aa10.41□□□□□ -0.74
GBP3-211ENST00000568006 SLC24A1O60721 1099 aa10.41□□□□□ -0.74
GBP3-211ENST00000568006 SOCS7O14512 581 aa10.4□□□□□ -0.74
GBP3-211ENST00000568006 CABLES1Q8TDN4 633 aa10.4□□□□□ -0.74
GBP3-211ENST00000568006 NGLY1Q96IV0 654 aa10.4□□□□□ -0.74
GBP3-211ENST00000568006 ZNF692Q9BU19 519 aaPredicted RBP10.4□□□□□ -0.74
GBP3-211ENST00000568006 LMO7Q8WWI1 1683 aa10.4□□□□□ -0.74
GBP3-211ENST00000568006 NINLQ9Y2I6 1382 aa10.39□□□□□ -0.75
GBP3-211ENST00000568006 MYOM1P52179 1685 aa10.39□□□□□ -0.75
GBP3-211ENST00000568006 ANP32EQ9BTT0 268 aa10.39□□□□□ -0.75
GBP3-211ENST00000568006 GLI3P10071 1580 aa10.39□□□□□ -0.75
GBP3-211ENST00000568006 PAK3O75914 559 aaPredicted RBP10.38□□□□□ -0.75
GBP3-211ENST00000568006 USP21Q9UK80 565 aa10.38□□□□□ -0.75
GBP3-211ENST00000568006 CPDO75976 1380 aa10.38□□□□□ -0.75
GBP3-211ENST00000568006 TTC21BQ7Z4L5 1316 aa10.37□□□□□ -0.75
GBP3-211ENST00000568006 TTC21AQ8NDW8 1320 aa10.37□□□□□ -0.75
GBP3-211ENST00000568006 FAM83GA6ND36 823 aa10.37□□□□□ -0.75
GBP3-211ENST00000568006 RGS12O14924 1447 aa10.37□□□□□ -0.75
GBP3-211ENST00000568006 LMOD2Q6P5Q4 547 aa10.37□□□□□ -0.75
GBP3-211ENST00000568006 QTRT2Q9H974 415 aaKnown RBP10.37□□□□□ -0.75
GBP3-211ENST00000568006 TRPC5Q9UL62 973 aaPredicted RBP10.37□□□□□ -0.75
GBP3-211ENST00000568006 A0A1W2PP64 1363 aa10.37□□□□□ -0.75
GBP3-211ENST00000568006 USP31Q70CQ4 1352 aa10.37□□□□□ -0.75
GBP3-211ENST00000568006 COL18A1P39060 1754 aa10.37□□□□□ -0.75
GBP3-211ENST00000568006 RXRBP28702 533 aa10.36□□□□□ -0.75
GBP3-211ENST00000568006 RBM6P78332 1123 aaKnown RBP10.36□□□□□ -0.75
GBP3-211ENST00000568006 TMF1P82094 1093 aa10.36□□□□□ -0.75
GBP3-211ENST00000568006 UNC5CLQ8IV45 518 aa10.36□□□□□ -0.75
GBP3-211ENST00000568006 ABTB2Q8N961 1025 aa10.36□□□□□ -0.75
GBP3-211ENST00000568006 SLC12A5Q9H2X9 1139 aa10.36□□□□□ -0.75
GBP3-211ENST00000568006 KTN1Q86UP2 1357 aaKnown RBP10.36□□□□□ -0.75
GBP3-211ENST00000568006 EDC4Q6P2E9 1401 aaKnown RBP10.35□□□□□ -0.75
GBP3-211ENST00000568006 NFAT5O94916 1531 aa10.35□□□□□ -0.75
GBP3-211ENST00000568006 NLRP13Q86W25 1043 aa10.35□□□□□ -0.75
GBP3-211ENST00000568006 ANKRD36BQ8N2N9 1353 aa10.35□□□□□ -0.75
GBP3-211ENST00000568006 KIAA0232Q92628 1395 aa10.35□□□□□ -0.75
GBP3-211ENST00000568006 HAP1P54257 671 aaPredicted RBP10.34□□□□□ -0.75
GBP3-211ENST00000568006 VPS72Q15906 364 aa10.34□□□□□ -0.75
GBP3-211ENST00000568006 CAMTA1Q9Y6Y1 1673 aa10.34□□□□□ -0.75
GBP3-211ENST00000568006 OVOS2A0A0J9YW53 1432 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms