RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 CCDC192P0DO97 292 aa14.9□□□□□ -0.02
CSPG4P13-202ENST00000567704 CPLX1O14810 134 aa14.9□□□□□ -0.02
CSPG4P13-202ENST00000567704 PATL2C9JE40 543 aaKnown RBP14.89□□□□□ -0.03
CSPG4P13-202ENST00000567704 SSFA2P28290 1259 aa14.89□□□□□ -0.03
CSPG4P13-202ENST00000567704 NAT10Q9H0A0 1025 aaKnown RBP14.89□□□□□ -0.03
CSPG4P13-202ENST00000567704 ACBD3Q9H3P7 528 aa14.89□□□□□ -0.03
CSPG4P13-202ENST00000567704 WDR33Q9C0J8 1336 aaKnown RBP14.88□□□□□ -0.03
CSPG4P13-202ENST00000567704 IPO7O95373 1038 aaKnown RBP14.88□□□□□ -0.03
CSPG4P13-202ENST00000567704 ERC2O15083 957 aa14.88□□□□□ -0.03
CSPG4P13-202ENST00000567704 PDILTQ8N807 584 aa14.88□□□□□ -0.03
CSPG4P13-202ENST00000567704 FYCO1Q9BQS8 1478 aa14.88□□□□□ -0.03
CSPG4P13-202ENST00000567704 CPLX2Q6PUV4 134 aaKnown RBP14.88□□□□□ -0.03
CSPG4P13-202ENST00000567704 SMC2O95347 1197 aa14.87□□□□□ -0.03
CSPG4P13-202ENST00000567704 NGDNQ8NEJ9 315 aaKnown RBP14.87□□□□□ -0.03
CSPG4P13-202ENST00000567704 EFCAB5A4FU69 1503 aa14.87□□□□□ -0.03
CSPG4P13-202ENST00000567704 WDR63Q8IWG1 891 aa14.87□□□□□ -0.03
CSPG4P13-202ENST00000567704 VGFO15240 615 aaPredicted RBP14.86□□□□□ -0.03
CSPG4P13-202ENST00000567704 KINO60870 393 aaKnown RBP14.86□□□□□ -0.03
CSPG4P13-202ENST00000567704 WWC1Q8IX03 1113 aa14.86□□□□□ -0.03
CSPG4P13-202ENST00000567704 APPP05067 770 aa14.85□□□□□ -0.03
CSPG4P13-202ENST00000567704 SYNE3Q6ZMZ3 975 aa14.85□□□□□ -0.03
CSPG4P13-202ENST00000567704 SKIDA1Q1XH10 827 aa14.85□□□□□ -0.03
CSPG4P13-202ENST00000567704 CEBPZQ03701 1054 aaKnown RBP14.85□□□□□ -0.03
CSPG4P13-202ENST00000567704 CFAP70Q5T0N1 1121 aa14.85□□□□□ -0.03
CSPG4P13-202ENST00000567704 PDCP20941 246 aa14.84□□□□□ -0.03
CSPG4P13-202ENST00000567704 TRIM29Q14134 588 aa14.84□□□□□ -0.03
CSPG4P13-202ENST00000567704 LEKR1Q6ZMV7 388 aa14.84□□□□□ -0.03
CSPG4P13-202ENST00000567704 TNMDQ9H2S6 317 aa14.84□□□□□ -0.03
CSPG4P13-202ENST00000567704 TSPYL4Q9UJ04 414 aa14.84□□□□□ -0.03
CSPG4P13-202ENST00000567704 TWISTNBQ3B726 338 aaPredicted RBP14.84□□□□□ -0.03
CSPG4P13-202ENST00000567704 CGNQ9P2M7 1197 aaKnown RBP14.84□□□□□ -0.03
CSPG4P13-202ENST00000567704 H0YHG0 523 aa14.84□□□□□ -0.03
CSPG4P13-202ENST00000567704 G3BP1Q13283 466 aaKnown RBP eCLIP14.84□□□□□ -0.03
CSPG4P13-202ENST00000567704 PCMTD1Q96MG8 357 aaPredicted RBP14.84□□□□□ -0.03
CSPG4P13-202ENST00000567704 IGHDP01880 384 aa14.83□□□□□ -0.03
CSPG4P13-202ENST00000567704 KIAA1107Q9UPP5 1409 aa14.83□□□□□ -0.03
CSPG4P13-202ENST00000567704 TTLL5Q6EMB2 1281 aa14.83□□□□□ -0.04
CSPG4P13-202ENST00000567704 TBC1D32Q96NH3 1257 aa14.83□□□□□ -0.04
CSPG4P13-202ENST00000567704 CABP2Q9NPB3 220 aa14.83□□□□□ -0.04
CSPG4P13-202ENST00000567704 SURF6O75683 361 aaKnown RBP14.83□□□□□ -0.04
CSPG4P13-202ENST00000567704 CSB-PGBD3P0DP91 1061 aa14.83□□□□□ -0.04
CSPG4P13-202ENST00000567704 PRKAR2BP31323 418 aa14.83□□□□□ -0.04
CSPG4P13-202ENST00000567704 ANKRD20A12PQ8NF67 263 aa14.83□□□□□ -0.04
CSPG4P13-202ENST00000567704 RUFY1Q96T51 708 aa14.83□□□□□ -0.04
CSPG4P13-202ENST00000567704 NAIPQ13075 1403 aa14.83□□□□□ -0.04
CSPG4P13-202ENST00000567704 IQGAP2Q13576 1575 aa14.83□□□□□ -0.04
CSPG4P13-202ENST00000567704 TAF3Q5VWG9 929 aa14.83□□□□□ -0.04
CSPG4P13-202ENST00000567704 TMEM57Q8N5G2 664 aa14.83□□□□□ -0.04
CSPG4P13-202ENST00000567704 HOOK1Q9UJC3 728 aaKnown RBP14.83□□□□□ -0.04
CSPG4P13-202ENST00000567704 HSP90AB4PQ58FF6 505 aa14.82□□□□□ -0.04
CSPG4P13-202ENST00000567704 TMEM132EQ6IEE7 984 aa14.82□□□□□ -0.04
CSPG4P13-202ENST00000567704 FILIP1Q7Z7B0 1213 aa14.82□□□□□ -0.04
CSPG4P13-202ENST00000567704 CNTROBQ8N137 903 aa14.82□□□□□ -0.04
CSPG4P13-202ENST00000567704 AK7Q96M32 723 aa14.82□□□□□ -0.04
CSPG4P13-202ENST00000567704 UBTFL1P0CB47 393 aaPredicted RBP14.82□□□□□ -0.04
CSPG4P13-202ENST00000567704 DUSP27Q5VZP5 1158 aa14.82□□□□□ -0.04
CSPG4P13-202ENST00000567704 SLC12A5Q9H2X9 1139 aa14.82□□□□□ -0.04
CSPG4P13-202ENST00000567704 TIAM1Q13009 1591 aa14.82□□□□□ -0.04
CSPG4P13-202ENST00000567704 NCOA1Q15788 1441 aa14.82□□□□□ -0.04
CSPG4P13-202ENST00000567704 PSMA5P28066 241 aa14.82□□□□□ -0.04
CSPG4P13-202ENST00000567704 AKAP17AQ02040 695 aaKnown RBP14.82□□□□□ -0.04
CSPG4P13-202ENST00000567704 TEFQ10587 303 aa14.82□□□□□ -0.04
CSPG4P13-202ENST00000567704 STAC3Q96MF2 364 aa14.81□□□□□ -0.04
CSPG4P13-202ENST00000567704 CT47B1P0C2W7 299 aaPredicted RBP14.81□□□□□ -0.04
CSPG4P13-202ENST00000567704 RARSP54136 660 aaKnown RBP14.81□□□□□ -0.04
CSPG4P13-202ENST00000567704 PPP4R3BQ5MIZ7 849 aa14.81□□□□□ -0.04
CSPG4P13-202ENST00000567704 DYNC1I1O14576 645 aa14.81□□□□□ -0.04
CSPG4P13-202ENST00000567704 KRT85P78386 507 aa14.81□□□□□ -0.04
CSPG4P13-202ENST00000567704 OLFM4Q6UX06 510 aa14.81□□□□□ -0.04
CSPG4P13-202ENST00000567704 USP25Q9UHP3 1055 aa14.81□□□□□ -0.04
CSPG4P13-202ENST00000567704 SPDYE4A6NLX3 237 aa14.8□□□□□ -0.04
CSPG4P13-202ENST00000567704 RRAGDQ9NQL2 400 aaPredicted RBP14.8□□□□□ -0.04
CSPG4P13-202ENST00000567704 FAM177A1Q8N128 213 aaPredicted RBP14.8□□□□□ -0.04
CSPG4P13-202ENST00000567704 C8orf34Q49A92 452 aa14.8□□□□□ -0.04
CSPG4P13-202ENST00000567704 TRERF1Q96PN7 1200 aa14.8□□□□□ -0.04
CSPG4P13-202ENST00000567704 GNAI3P08754 354 aa14.79□□□□□ -0.04
CSPG4P13-202ENST00000567704 NEXNQ0ZGT2 675 aa14.79□□□□□ -0.04
CSPG4P13-202ENST00000567704 BAG4O95429 457 aaKnown RBP14.79□□□□□ -0.04
CSPG4P13-202ENST00000567704 LARP1BQ659C4 914 aaKnown RBP14.78□□□□□ -0.04
CSPG4P13-202ENST00000567704 ERBINQ96RT1 1412 aa14.78□□□□□ -0.04
CSPG4P13-202ENST00000567704 LRPPRCP42704 1394 aaKnown RBP14.78□□□□□ -0.04
CSPG4P13-202ENST00000567704 CCP110O43303 1012 aa14.78□□□□□ -0.04
CSPG4P13-202ENST00000567704 CLASRPQ8N2M8 674 aaKnown RBP14.78□□□□□ -0.04
CSPG4P13-202ENST00000567704 ERCC4Q92889 916 aaPredicted RBP14.78□□□□□ -0.04
CSPG4P13-202ENST00000567704 NUP62CLQ9H1M0 184 aa14.78□□□□□ -0.04
CSPG4P13-202ENST00000567704 EIF4G3O43432 1585 aaKnown RBP14.78□□□□□ -0.04
CSPG4P13-202ENST00000567704 KLHL40Q2TBA0 621 aa14.77□□□□□ -0.04
CSPG4P13-202ENST00000567704 FSD1Q9BTV5 496 aa14.77□□□□□ -0.04
CSPG4P13-202ENST00000567704 RBM27Q9P2N5 1060 aaKnown RBP14.77□□□□□ -0.04
CSPG4P13-202ENST00000567704 MCM5P33992 734 aa14.77□□□□□ -0.05
CSPG4P13-202ENST00000567704 TRDNQ13061 729 aa14.77□□□□□ -0.05
CSPG4P13-202ENST00000567704 AEBP1Q8IUX7 1158 aa14.77□□□□□ -0.05
CSPG4P13-202ENST00000567704 UPF3BQ9BZI7 483 aaKnown RBP14.77□□□□□ -0.05
CSPG4P13-202ENST00000567704 CYP46A1Q9Y6A2 500 aa14.77□□□□□ -0.05
CSPG4P13-202ENST00000567704 STK3Q13188 491 aa14.76□□□□□ -0.05
CSPG4P13-202ENST00000567704 GNAI2P04899 355 aa14.76□□□□□ -0.05
CSPG4P13-202ENST00000567704 AXDND1Q5T1B0 1012 aaPredicted RBP14.76□□□□□ -0.05
CSPG4P13-202ENST00000567704 CEP89Q96ST8 783 aa14.76□□□□□ -0.05
CSPG4P13-202ENST00000567704 NKTRP30414 1462 aaKnown RBP14.76□□□□□ -0.05
CSPG4P13-202ENST00000567704 RDXP35241 583 aaKnown RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms