RNA–Protein interactions for RNA: ENST00000567535.5

SCAMP5-213, Transcript of secretory carrier membrane protein 5, humanhuman

TSL 3

Gene SCAMP5, Length 593 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP5-213ENST00000567535 TOPAZ1Q8N9V7 1692 aa28.74■■■□□ 2.19
SCAMP5-213ENST00000567535 CCDC9Q9Y3X0 531 aaKnown RBP28.74■■■□□ 2.19
SCAMP5-213ENST00000567535 SRCAPQ6ZRS2 3230 aa28.73■■■□□ 2.19
SCAMP5-213ENST00000567535 NUDT16Q96DE0 195 aaKnown RBP28.72■■■□□ 2.19
SCAMP5-213ENST00000567535 BTG4Q9NY30 223 aa28.7■■■□□ 2.18
SCAMP5-213ENST00000567535 PAK3O75914 559 aaPredicted RBP28.69■■■□□ 2.18
SCAMP5-213ENST00000567535 ZRANB1Q9UGI0 708 aa28.69■■■□□ 2.18
SCAMP5-213ENST00000567535 CDK19Q9BWU1 502 aa28.68■■■□□ 2.18
SCAMP5-213ENST00000567535 PHRF1Q9P1Y6 1649 aaKnown RBP28.67■■■□□ 2.18
SCAMP5-213ENST00000567535 POLR3AO14802 1390 aaPredicted RBP28.66■■■□□ 2.18
SCAMP5-213ENST00000567535 KRT27Q7Z3Y8 459 aa28.66■■■□□ 2.18
SCAMP5-213ENST00000567535 NBPF1Q3BBV0 1214 aa28.64■■■□□ 2.18
SCAMP5-213ENST00000567535 FAM98CQ17RN3 349 aaKnown RBP28.62■■■□□ 2.17
SCAMP5-213ENST00000567535 PRDM11Q9NQV5 511 aa28.62■■■□□ 2.17
SCAMP5-213ENST00000567535 CCDC61Q9Y6R9 512 aa28.62■■■□□ 2.17
SCAMP5-213ENST00000567535 A0A0G2JS52 829 aa28.61■■■□□ 2.17
SCAMP5-213ENST00000567535 MYT1Q01538 1121 aa28.61■■■□□ 2.17
SCAMP5-213ENST00000567535 ACEP12821 1306 aa28.6■■■□□ 2.17
SCAMP5-213ENST00000567535 SPATA31A5Q5VU36 1347 aa28.6■■■□□ 2.17
SCAMP5-213ENST00000567535 SPATA31A7Q8IWB4 1347 aa28.6■■■□□ 2.17
SCAMP5-213ENST00000567535 KIAA0232Q92628 1395 aa28.6■■■□□ 2.17
SCAMP5-213ENST00000567535 THSD7AQ9UPZ6 1657 aa28.59■■■□□ 2.17
SCAMP5-213ENST00000567535 PLEKHG3A1L390 1219 aa28.59■■■□□ 2.17
SCAMP5-213ENST00000567535 SF3B2Q13435 895 aaKnown RBP28.59■■■□□ 2.17
SCAMP5-213ENST00000567535 DEFB132Q7Z7B7 95 aa28.58■■■□□ 2.17
SCAMP5-213ENST00000567535 NBPF8Q3BBV2 869 aa28.57■■■□□ 2.16
SCAMP5-213ENST00000567535 CENPJQ9HC77 1338 aaPredicted RBP28.57■■■□□ 2.16
SCAMP5-213ENST00000567535 NRKQ7Z2Y5 1582 aa28.56■■■□□ 2.16
SCAMP5-213ENST00000567535 QRICH2Q9H0J4 1663 aa28.56■■■□□ 2.16
SCAMP5-213ENST00000567535 PPIP5K1Q6PFW1 1433 aa28.53■■■□□ 2.16
SCAMP5-213ENST00000567535 NUTM2GQ5VZR2 741 aa28.53■■■□□ 2.16
SCAMP5-213ENST00000567535 SRPK2P78362 688 aaKnown RBP28.52■■■□□ 2.16
SCAMP5-213ENST00000567535 CHRNA2Q15822 529 aa28.52■■■□□ 2.16
SCAMP5-213ENST00000567535 SPATA31A1Q5TZJ5 1347 aa28.5■■■□□ 2.15
SCAMP5-213ENST00000567535 RGPD1P0DJD0 1748 aa28.5■■■□□ 2.15
SCAMP5-213ENST00000567535 ZC3H6P61129 1189 aaKnown RBP28.5■■■□□ 2.15
SCAMP5-213ENST00000567535 USP19O94966 1318 aa28.49■■■□□ 2.15
SCAMP5-213ENST00000567535 ABTB2Q8N961 1025 aa28.49■■■□□ 2.15
SCAMP5-213ENST00000567535 L3MBTL2Q969R5 705 aa28.49■■■□□ 2.15
SCAMP5-213ENST00000567535 TRPM1Q7Z4N2 1603 aa28.49■■■□□ 2.15
SCAMP5-213ENST00000567535 CABP2Q9NPB3 220 aa28.47■■■□□ 2.15
SCAMP5-213ENST00000567535 LMO7Q8WWI1 1683 aa28.47■■■□□ 2.15
SCAMP5-213ENST00000567535 CPDO75976 1380 aa28.47■■■□□ 2.15
SCAMP5-213ENST00000567535 BAG6P46379 1132 aa28.46■■■□□ 2.15
SCAMP5-213ENST00000567535 STRN4Q9NRL3 753 aa28.46■■■□□ 2.15
SCAMP5-213ENST00000567535 BRD4O60885 1362 aaPredicted RBP28.46■■■□□ 2.15
SCAMP5-213ENST00000567535 SSH2Q76I76 1423 aa28.45■■■□□ 2.15
SCAMP5-213ENST00000567535 CAMTA1Q9Y6Y1 1673 aa28.45■■■□□ 2.14
SCAMP5-213ENST00000567535 FAM182BQ5T319 152 aa28.44■■■□□ 2.14
SCAMP5-213ENST00000567535 TNS1Q9HBL0 1735 aaKnown RBP28.43■■■□□ 2.14
SCAMP5-213ENST00000567535 NLRP13Q86W25 1043 aa28.42■■■□□ 2.14
SCAMP5-213ENST00000567535 USP6P35125 1406 aa28.42■■■□□ 2.14
SCAMP5-213ENST00000567535 SIN3AQ96ST3 1273 aa28.41■■■□□ 2.14
SCAMP5-213ENST00000567535 DISP2A7MBM2 1401 aa28.4■■■□□ 2.14
SCAMP5-213ENST00000567535 CABP1Q9NZU7 370 aa28.39■■■□□ 2.14
SCAMP5-213ENST00000567535 GCP02774 474 aa28.38■■■□□ 2.13
SCAMP5-213ENST00000567535 EVA1CP58658 441 aa28.38■■■□□ 2.13
SCAMP5-213ENST00000567535 BARGINQ6ZT62 677 aa28.38■■■□□ 2.13
SCAMP5-213ENST00000567535 USP35Q9P2H5 1018 aa28.37■■■□□ 2.13
SCAMP5-213ENST00000567535 EVC2Q86UK5 1308 aa28.37■■■□□ 2.13
SCAMP5-213ENST00000567535 ROCK2O75116 1388 aaKnown RBP28.37■■■□□ 2.13
SCAMP5-213ENST00000567535 LRP5O75197 1615 aa28.36■■■□□ 2.13
SCAMP5-213ENST00000567535 LARP1Q6PKG0 1096 aaKnown RBP28.36■■■□□ 2.13
SCAMP5-213ENST00000567535 SLIT3O75094 1523 aa28.36■■■□□ 2.13
SCAMP5-213ENST00000567535 COL5A2P05997 1499 aaPredicted RBP28.35■■■□□ 2.13
SCAMP5-213ENST00000567535 EN1Q05925 392 aaPredicted RBP28.35■■■□□ 2.13
SCAMP5-213ENST00000567535 PIK3C2AO00443 1686 aa28.35■■■□□ 2.13
SCAMP5-213ENST00000567535 FAM196AQ6ZSG2 479 aa28.34■■■□□ 2.13
SCAMP5-213ENST00000567535 NEUROD1Q13562 356 aa28.33■■■□□ 2.13
SCAMP5-213ENST00000567535 TCP11L2Q8N4U5 519 aa28.32■■■□□ 2.12
SCAMP5-213ENST00000567535 NLRP6P59044 892 aa28.31■■■□□ 2.12
SCAMP5-213ENST00000567535 AKAP12Q02952 1782 aa28.29■■■□□ 2.12
SCAMP5-213ENST00000567535 PARP4Q9UKK3 1724 aaKnown RBP28.29■■■□□ 2.12
SCAMP5-213ENST00000567535 PSDA5PKW4 1024 aaPredicted RBP28.29■■■□□ 2.12
SCAMP5-213ENST00000567535 THRAP3Q9Y2W1 955 aaKnown RBP28.29■■■□□ 2.12
SCAMP5-213ENST00000567535 CRB1P82279 1406 aa28.28■■■□□ 2.12
SCAMP5-213ENST00000567535 AATKQ6ZMQ8 1374 aa28.28■■■□□ 2.12
SCAMP5-213ENST00000567535 TRIM37O94972 964 aa28.28■■■□□ 2.12
SCAMP5-213ENST00000567535 PDE3BQ13370 1112 aa28.27■■■□□ 2.12
SCAMP5-213ENST00000567535 COL18A1P39060 1754 aa28.25■■■□□ 2.11
SCAMP5-213ENST00000567535 PARD3Q8TEW0 1356 aa28.24■■■□□ 2.11
SCAMP5-213ENST00000567535 EZH2Q15910 746 aaKnown RBP28.24■■■□□ 2.11
SCAMP5-213ENST00000567535 CAMKK2Q96RR4 588 aa28.24■■■□□ 2.11
SCAMP5-213ENST00000567535 ZBTB7CA1YPR0 619 aa28.23■■■□□ 2.11
SCAMP5-213ENST00000567535 ZNF692Q9BU19 519 aaPredicted RBP28.23■■■□□ 2.11
SCAMP5-213ENST00000567535 CPSF1Q10570 1443 aaKnown RBP28.23■■■□□ 2.11
SCAMP5-213ENST00000567535 SBNO2Q9Y2G9 1366 aa28.23■■■□□ 2.11
SCAMP5-213ENST00000567535 TTC21BQ7Z4L5 1316 aa28.21■■■□□ 2.11
SCAMP5-213ENST00000567535 RREB1Q92766 1687 aa28.21■■■□□ 2.11
SCAMP5-213ENST00000567535 APBA3O96018 575 aa28.2■■■□□ 2.1
SCAMP5-213ENST00000567535 LRRC37A3O60309 1634 aa28.2■■■□□ 2.1
SCAMP5-213ENST00000567535 TTC21AQ8NDW8 1320 aa28.19■■■□□ 2.1
SCAMP5-213ENST00000567535 MON2Q7Z3U7 1717 aa28.19■■■□□ 2.1
SCAMP5-213ENST00000567535 R3HDM1Q15032 1099 aaKnown RBP28.19■■■□□ 2.1
SCAMP5-213ENST00000567535 WNK3Q9BYP7 1800 aa28.18■■■□□ 2.1
SCAMP5-213ENST00000567535 PEAK1Q9H792 1746 aa28.18■■■□□ 2.1
SCAMP5-213ENST00000567535 KCNH5Q8NCM2 988 aa28.17■■■□□ 2.1
SCAMP5-213ENST00000567535 KTN1Q86UP2 1357 aaKnown RBP28.16■■■□□ 2.1
SCAMP5-213ENST00000567535 NUP188Q5SRE5 1749 aa28.16■■■□□ 2.1
SCAMP5-213ENST00000567535 NFAT5O94916 1531 aa28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms