RNA–Protein interactions for RNA: ENST00000567445.1

CDH13-210, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-210ENST00000567445 CFAP70Q5T0N1 1121 aa13.54□□□□□ -0.24
CDH13-210ENST00000567445 RGS12O14924 1447 aa13.53□□□□□ -0.24
CDH13-210ENST00000567445 FMN2Q9NZ56 1722 aa13.53□□□□□ -0.24
CDH13-210ENST00000567445 FNBP4Q8N3X1 1017 aaPredicted RBP13.53□□□□□ -0.24
CDH13-210ENST00000567445 USP21Q9UK80 565 aa13.53□□□□□ -0.24
CDH13-210ENST00000567445 TRPC5Q9UL62 973 aaPredicted RBP13.51□□□□□ -0.25
CDH13-210ENST00000567445 KIF1AQ12756 1690 aa13.51□□□□□ -0.25
CDH13-210ENST00000567445 PRAM1Q96QH2 718 aa13.49□□□□□ -0.25
CDH13-210ENST00000567445 SPATA31A3Q5VYP0 1347 aa13.49□□□□□ -0.25
CDH13-210ENST00000567445 ATRNO75882 1429 aa13.49□□□□□ -0.25
CDH13-210ENST00000567445 DLC1Q96QB1 1528 aa13.49□□□□□ -0.25
CDH13-210ENST00000567445 SAFB2Q14151 953 aaKnown RBP eCLIP13.48□□□□□ -0.25
CDH13-210ENST00000567445 KRT28Q7Z3Y7 464 aa13.48□□□□□ -0.25
CDH13-210ENST00000567445 BCL9LQ86UU0 1499 aa13.48□□□□□ -0.25
CDH13-210ENST00000567445 HRCP23327 699 aa13.48□□□□□ -0.25
CDH13-210ENST00000567445 PLCD3Q8N3E9 789 aa13.48□□□□□ -0.25
CDH13-210ENST00000567445 POGKQ9P215 609 aa13.48□□□□□ -0.25
CDH13-210ENST00000567445 PHF8Q9UPP1 1060 aa13.48□□□□□ -0.25
CDH13-210ENST00000567445 MARF1Q9Y4F3 1742 aaKnown RBP13.47□□□□□ -0.25
CDH13-210ENST00000567445 ADGRB1O14514 1584 aa13.47□□□□□ -0.25
CDH13-210ENST00000567445 RGPD8O14715 1765 aaPredicted RBP13.47□□□□□ -0.25
CDH13-210ENST00000567445 PSME1Q06323 249 aa13.46□□□□□ -0.25
CDH13-210ENST00000567445 DCAF11Q8TEB1 546 aa13.46□□□□□ -0.25
CDH13-210ENST00000567445 STAC3Q96MF2 364 aa13.46□□□□□ -0.25
CDH13-210ENST00000567445 KDM2AQ9Y2K7 1162 aa13.46□□□□□ -0.25
CDH13-210ENST00000567445 ATAD2Q6PL18 1390 aa13.45□□□□□ -0.26
CDH13-210ENST00000567445 TNS3Q68CZ2 1445 aa13.45□□□□□ -0.26
CDH13-210ENST00000567445 ANKARQ7Z5J8 1434 aa13.44□□□□□ -0.26
CDH13-210ENST00000567445 TRAK1Q9UPV9 953 aa13.44□□□□□ -0.26
CDH13-210ENST00000567445 ADGRB2O60241 1585 aa13.44□□□□□ -0.26
CDH13-210ENST00000567445 SBNO1A3KN83 1393 aa13.43□□□□□ -0.26
CDH13-210ENST00000567445 GJD4Q96KN9 370 aaPredicted RBP13.43□□□□□ -0.26
CDH13-210ENST00000567445 SLIT2O94813 1529 aa13.43□□□□□ -0.26
CDH13-210ENST00000567445 UNC5CLQ8IV45 518 aa13.42□□□□□ -0.26
CDH13-210ENST00000567445 FBXO3Q9UK99 471 aa13.42□□□□□ -0.26
CDH13-210ENST00000567445 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.42□□□□□ -0.26
CDH13-210ENST00000567445 USP32Q8NFA0 1604 aa13.42□□□□□ -0.26
CDH13-210ENST00000567445 ARHGEF10O15013 1369 aa13.42□□□□□ -0.26
CDH13-210ENST00000567445 HAP1P54257 671 aaPredicted RBP13.42□□□□□ -0.26
CDH13-210ENST00000567445 HIRIP3Q9BW71 556 aaPredicted RBP13.42□□□□□ -0.26
CDH13-210ENST00000567445 EIF3AQ14152 1382 aaKnown RBP13.41□□□□□ -0.26
CDH13-210ENST00000567445 PMFBP1Q8TBY8 1022 aa13.41□□□□□ -0.26
CDH13-210ENST00000567445 MINK1Q8N4C8 1332 aaPredicted RBP13.4□□□□□ -0.26
CDH13-210ENST00000567445 LMOD2Q6P5Q4 547 aa13.4□□□□□ -0.26
CDH13-210ENST00000567445 CABLES1Q8TDN4 633 aa13.4□□□□□ -0.26
CDH13-210ENST00000567445 PHF12Q96QT6 1004 aa13.4□□□□□ -0.26
CDH13-210ENST00000567445 EP400Q96L91 3159 aa13.4□□□□□ -0.27
CDH13-210ENST00000567445 RALGAPBQ86X10 1494 aa13.39□□□□□ -0.27
CDH13-210ENST00000567445 ZBTB47Q9UFB7 747 aaPredicted RBP13.39□□□□□ -0.27
CDH13-210ENST00000567445 TULP4Q9NRJ4 1543 aa13.38□□□□□ -0.27
CDH13-210ENST00000567445 WASLO00401 505 aaPredicted RBP13.38□□□□□ -0.27
CDH13-210ENST00000567445 TSPYL2Q9H2G4 693 aaPredicted RBP13.38□□□□□ -0.27
CDH13-210ENST00000567445 GPRASP1Q5JY77 1395 aa13.38□□□□□ -0.27
CDH13-210ENST00000567445 PRR36Q9H6K5 1346 aa13.38□□□□□ -0.27
CDH13-210ENST00000567445 GLI3P10071 1580 aa13.37□□□□□ -0.27
CDH13-210ENST00000567445 ABCA3Q99758 1704 aa13.37□□□□□ -0.27
CDH13-210ENST00000567445 CCDC125Q86Z20 511 aa13.36□□□□□ -0.27
CDH13-210ENST00000567445 DCBLD2Q96PD2 775 aa13.36□□□□□ -0.27
CDH13-210ENST00000567445 TRPM3Q9HCF6 1732 aaPredicted RBP13.36□□□□□ -0.27
CDH13-210ENST00000567445 NWD2Q9ULI1 1742 aa13.36□□□□□ -0.27
CDH13-210ENST00000567445 PLCH1Q4KWH8 1693 aa13.36□□□□□ -0.27
CDH13-210ENST00000567445 GALR2O43603 387 aaPredicted RBP13.36□□□□□ -0.27
CDH13-210ENST00000567445 POTEIP0CG38 1075 aa13.36□□□□□ -0.27
CDH13-210ENST00000567445 VPS72Q15906 364 aa13.36□□□□□ -0.27
CDH13-210ENST00000567445 ARHGEF28Q8N1W1 1705 aaKnown RBP13.35□□□□□ -0.27
CDH13-210ENST00000567445 FAM83GA6ND36 823 aa13.35□□□□□ -0.27
CDH13-210ENST00000567445 NGDNQ8NEJ9 315 aaKnown RBP13.34□□□□□ -0.27
CDH13-210ENST00000567445 ALS2Q96Q42 1657 aa13.34□□□□□ -0.27
CDH13-210ENST00000567445 ATP7BP35670 1465 aa13.32□□□□□ -0.28
CDH13-210ENST00000567445 KIAA1210Q9ULL0 1709 aa13.32□□□□□ -0.28
CDH13-210ENST00000567445 ONECUT3O60422 494 aaPredicted RBP13.32□□□□□ -0.28
CDH13-210ENST00000567445 SEPT12Q8IYM1 358 aa13.32□□□□□ -0.28
CDH13-210ENST00000567445 NUDT16Q96DE0 195 aaKnown RBP13.32□□□□□ -0.28
CDH13-210ENST00000567445 CCDC9Q9Y3X0 531 aaKnown RBP13.32□□□□□ -0.28
CDH13-210ENST00000567445 ITSN1Q15811 1721 aa13.31□□□□□ -0.28
CDH13-210ENST00000567445 CDK19Q9BWU1 502 aa13.31□□□□□ -0.28
CDH13-210ENST00000567445 BRWD3Q6RI45 1802 aa13.31□□□□□ -0.28
CDH13-210ENST00000567445 SRCAPQ6ZRS2 3230 aa13.3□□□□□ -0.28
CDH13-210ENST00000567445 RASEFQ8IZ41 740 aa13.3□□□□□ -0.28
CDH13-210ENST00000567445 BTG4Q9NY30 223 aa13.3□□□□□ -0.28
CDH13-210ENST00000567445 CCDC61Q9Y6R9 512 aa13.3□□□□□ -0.28
CDH13-210ENST00000567445 BLMP54132 1417 aaPredicted RBP13.3□□□□□ -0.28
CDH13-210ENST00000567445 PLCB2Q00722 1185 aa13.29□□□□□ -0.28
CDH13-210ENST00000567445 COL14A1Q05707 1796 aaKnown RBP13.29□□□□□ -0.28
CDH13-210ENST00000567445 NRAPQ86VF7 1730 aa13.29□□□□□ -0.28
CDH13-210ENST00000567445 NBPF1Q3BBV0 1214 aa13.29□□□□□ -0.28
CDH13-210ENST00000567445 CRYBG1Q9Y4K1 1723 aa13.28□□□□□ -0.28
CDH13-210ENST00000567445 KRT27Q7Z3Y8 459 aa13.28□□□□□ -0.28
CDH13-210ENST00000567445 POLR3AO14802 1390 aaPredicted RBP13.27□□□□□ -0.28
CDH13-210ENST00000567445 PRDM11Q9NQV5 511 aa13.27□□□□□ -0.29
CDH13-210ENST00000567445 ACEP12821 1306 aa13.27□□□□□ -0.29
CDH13-210ENST00000567445 TOPAZ1Q8N9V7 1692 aa13.26□□□□□ -0.29
CDH13-210ENST00000567445 A0A0G2JS52 829 aa13.26□□□□□ -0.29
CDH13-210ENST00000567445 PLEKHG3A1L390 1219 aa13.26□□□□□ -0.29
CDH13-210ENST00000567445 MYT1Q01538 1121 aa13.26□□□□□ -0.29
CDH13-210ENST00000567445 SF3B2Q13435 895 aaKnown RBP13.26□□□□□ -0.29
CDH13-210ENST00000567445 FAM98CQ17RN3 349 aaKnown RBP13.26□□□□□ -0.29
CDH13-210ENST00000567445 NBPF8Q3BBV2 869 aa13.26□□□□□ -0.29
CDH13-210ENST00000567445 SPATA31A5Q5VU36 1347 aa13.25□□□□□ -0.29
CDH13-210ENST00000567445 SPATA31A7Q8IWB4 1347 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms