RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 CCDC61Q9Y6R9 512 aa30.57■■■□□ 2.48
LINC00543-201ENST00000567234 MON2Q7Z3U7 1717 aa30.56■■■□□ 2.48
LINC00543-201ENST00000567234 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.56■■■□□ 2.48
LINC00543-201ENST00000567234 DUSP27Q5VZP5 1158 aa30.56■■■□□ 2.48
LINC00543-201ENST00000567234 RUNDC1Q96C34 613 aa30.56■■■□□ 2.48
LINC00543-201ENST00000567234 NUDT16Q96DE0 195 aaKnown RBP30.56■■■□□ 2.48
LINC00543-201ENST00000567234 AKAP12Q02952 1782 aa30.56■■■□□ 2.48
LINC00543-201ENST00000567234 NCBP3Q53F19 620 aaKnown RBP30.55■■■□□ 2.48
LINC00543-201ENST00000567234 TRMT2AQ8IZ69 625 aaKnown RBP30.54■■■□□ 2.48
LINC00543-201ENST00000567234 SLFN5Q08AF3 891 aa30.54■■■□□ 2.48
LINC00543-201ENST00000567234 ITSN1Q15811 1721 aa30.53■■■□□ 2.48
LINC00543-201ENST00000567234 PIK3R4Q99570 1358 aa30.53■■■□□ 2.48
LINC00543-201ENST00000567234 KCNA6P17658 529 aa30.53■■■□□ 2.48
LINC00543-201ENST00000567234 STRCQ7RTU9 1775 aa30.53■■■□□ 2.48
LINC00543-201ENST00000567234 PTCH1Q13635 1447 aa30.52■■■□□ 2.48
LINC00543-201ENST00000567234 COL3A1P02461 1466 aaPredicted RBP30.52■■■□□ 2.48
LINC00543-201ENST00000567234 IQSEC2Q5JU85 1478 aa30.52■■■□□ 2.48
LINC00543-201ENST00000567234 ZNF692Q9BU19 519 aaPredicted RBP30.49■■■□□ 2.47
LINC00543-201ENST00000567234 TOPAZ1Q8N9V7 1692 aa30.49■■■□□ 2.47
LINC00543-201ENST00000567234 PNPLA6Q8IY17 1366 aa30.49■■■□□ 2.47
LINC00543-201ENST00000567234 E9PSI1 815 aa30.48■■■□□ 2.47
LINC00543-201ENST00000567234 PRR36Q9H6K5 1346 aa30.44■■■□□ 2.46
LINC00543-201ENST00000567234 CCDC27Q2M243 656 aa30.44■■■□□ 2.46
LINC00543-201ENST00000567234 B4GALNT3Q6L9W6 998 aa30.44■■■□□ 2.46
LINC00543-201ENST00000567234 PHF23Q9BUL5 403 aaPredicted RBP30.44■■■□□ 2.46
LINC00543-201ENST00000567234 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.43■■■□□ 2.46
LINC00543-201ENST00000567234 WWC1Q8IX03 1113 aa30.43■■■□□ 2.46
LINC00543-201ENST00000567234 MAP2P11137 1827 aaKnown RBP30.43■■■□□ 2.46
LINC00543-201ENST00000567234 TCP11L2Q8N4U5 519 aa30.43■■■□□ 2.46
LINC00543-201ENST00000567234 NKTRP30414 1462 aaKnown RBP30.42■■■□□ 2.46
LINC00543-201ENST00000567234 U2AF1L5P0DN76 240 aaPredicted RBP30.42■■■□□ 2.46
LINC00543-201ENST00000567234 U2AF1Q01081 240 aaKnown RBP eCLIP30.42■■■□□ 2.46
LINC00543-201ENST00000567234 RBM33Q96EV2 1170 aaKnown RBP30.41■■■□□ 2.46
LINC00543-201ENST00000567234 NWD1Q149M9 1564 aa30.4■■■□□ 2.46
LINC00543-201ENST00000567234 PLEKHG3A1L390 1219 aa30.4■■■□□ 2.46
LINC00543-201ENST00000567234 AATKQ6ZMQ8 1374 aa30.39■■■□□ 2.46
LINC00543-201ENST00000567234 STRCP1A6NGW2 1772 aa30.39■■■□□ 2.45
LINC00543-201ENST00000567234 WDR63Q8IWG1 891 aa30.38■■■□□ 2.45
LINC00543-201ENST00000567234 NRKQ7Z2Y5 1582 aa30.36■■■□□ 2.45
LINC00543-201ENST00000567234 DIAPH1O60610 1272 aaKnown RBP30.36■■■□□ 2.45
LINC00543-201ENST00000567234 CCDC136Q96JN2 1154 aa30.36■■■□□ 2.45
LINC00543-201ENST00000567234 NALCNQ8IZF0 1738 aa30.36■■■□□ 2.45
LINC00543-201ENST00000567234 PNNQ9H307 717 aaKnown RBP30.36■■■□□ 2.45
LINC00543-201ENST00000567234 SPINK5Q9NQ38 1064 aaPredicted RBP30.36■■■□□ 2.45
LINC00543-201ENST00000567234 POLKQ9UBT6 870 aa30.35■■■□□ 2.45
LINC00543-201ENST00000567234 NME9Q86XW9 330 aa30.33■■■□□ 2.45
LINC00543-201ENST00000567234 PLEKHF1Q96S99 279 aa30.33■■■□□ 2.45
LINC00543-201ENST00000567234 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.32■■■□□ 2.44
LINC00543-201ENST00000567234 COG3Q96JB2 828 aa30.32■■■□□ 2.44
LINC00543-201ENST00000567234 NUTM2FA1L443 756 aa30.31■■■□□ 2.44
LINC00543-201ENST00000567234 CDK12Q9NYV4 1490 aaPredicted RBP30.31■■■□□ 2.44
LINC00543-201ENST00000567234 U2SURPO15042 1029 aaKnown RBP30.31■■■□□ 2.44
LINC00543-201ENST00000567234 EXOC6Q8TAG9 804 aa30.31■■■□□ 2.44
LINC00543-201ENST00000567234 DMRT2Q9Y5R5 561 aa30.31■■■□□ 2.44
LINC00543-201ENST00000567234 ACEP12821 1306 aa30.29■■■□□ 2.44
LINC00543-201ENST00000567234 USP6P35125 1406 aa30.29■■■□□ 2.44
LINC00543-201ENST00000567234 RRP7AQ9Y3A4 280 aaKnown RBP30.27■■■□□ 2.44
LINC00543-201ENST00000567234 RGPD8O14715 1765 aaPredicted RBP30.27■■■□□ 2.44
LINC00543-201ENST00000567234 TTC21BQ7Z4L5 1316 aa30.27■■■□□ 2.44
LINC00543-201ENST00000567234 NEUROD2Q15784 382 aa30.26■■■□□ 2.44
LINC00543-201ENST00000567234 ANKARQ7Z5J8 1434 aa30.26■■■□□ 2.43
LINC00543-201ENST00000567234 PLIN1O60240 522 aa30.26■■■□□ 2.43
LINC00543-201ENST00000567234 FCHSD2O94868 740 aa30.26■■■□□ 2.43
LINC00543-201ENST00000567234 MAPK8IP3Q9UPT6 1336 aa30.25■■■□□ 2.43
LINC00543-201ENST00000567234 SSH2Q76I76 1423 aa30.24■■■□□ 2.43
LINC00543-201ENST00000567234 PROSER2Q86WR7 435 aaPredicted RBP30.23■■■□□ 2.43
LINC00543-201ENST00000567234 FMN2Q9NZ56 1722 aa30.23■■■□□ 2.43
LINC00543-201ENST00000567234 TMPOP42166 694 aaKnown RBP30.22■■■□□ 2.43
LINC00543-201ENST00000567234 ZRANB1Q9UGI0 708 aa30.22■■■□□ 2.43
LINC00543-201ENST00000567234 ADGRL3Q9HAR2 1447 aa30.22■■■□□ 2.43
LINC00543-201ENST00000567234 DEKP35659 375 aaKnown RBP30.22■■■□□ 2.43
LINC00543-201ENST00000567234 OVOS2A0A0J9YW53 1432 aa30.21■■■□□ 2.43
LINC00543-201ENST00000567234 OVOS2Q6IE36 1432 aa30.21■■■□□ 2.43
LINC00543-201ENST00000567234 TTC21AQ8NDW8 1320 aa30.2■■■□□ 2.43
LINC00543-201ENST00000567234 MYH16Q9H6N6 1097 aa30.2■■■□□ 2.43
LINC00543-201ENST00000567234 EMILIN1Q9Y6C2 1016 aa30.19■■■□□ 2.42
LINC00543-201ENST00000567234 LRRC7Q96NW7 1537 aa30.19■■■□□ 2.42
LINC00543-201ENST00000567234 ZNF335Q9H4Z2 1342 aaPredicted RBP30.18■■■□□ 2.42
LINC00543-201ENST00000567234 PPM1GO15355 546 aaPredicted RBP30.18■■■□□ 2.42
LINC00543-201ENST00000567234 FBLN1P23142 703 aa30.18■■■□□ 2.42
LINC00543-201ENST00000567234 CRBNQ96SW2 442 aa30.18■■■□□ 2.42
LINC00543-201ENST00000567234 C14orf37Q86TY3 774 aa30.17■■■□□ 2.42
LINC00543-201ENST00000567234 NOP58Q9Y2X3 529 aaKnown RBP30.17■■■□□ 2.42
LINC00543-201ENST00000567234 IL13P35225 146 aa30.17■■■□□ 2.42
LINC00543-201ENST00000567234 RSPH6AQ9H0K4 717 aa30.17■■■□□ 2.42
LINC00543-201ENST00000567234 IL16Q14005 1332 aa30.16■■■□□ 2.42
LINC00543-201ENST00000567234 USP31Q70CQ4 1352 aa30.16■■■□□ 2.42
LINC00543-201ENST00000567234 TMEM94Q12767 1356 aa30.15■■■□□ 2.42
LINC00543-201ENST00000567234 XIRP1Q702N8 1843 aaKnown RBP30.14■■■□□ 2.42
LINC00543-201ENST00000567234 NEFMP07197 916 aa30.14■■■□□ 2.42
LINC00543-201ENST00000567234 TRIM35Q9UPQ4 493 aa30.14■■■□□ 2.42
LINC00543-201ENST00000567234 CT47B1P0C2W7 299 aaPredicted RBP30.12■■■□□ 2.41
LINC00543-201ENST00000567234 C20orf194Q5TEA3 1177 aa30.12■■■□□ 2.41
LINC00543-201ENST00000567234 RIPK4P57078 832 aa30.1■■■□□ 2.41
LINC00543-201ENST00000567234 NGDNQ8NEJ9 315 aaKnown RBP30.1■■■□□ 2.41
LINC00543-201ENST00000567234 BCAR3O75815 825 aa30.09■■■□□ 2.41
LINC00543-201ENST00000567234 PRKAR2BP31323 418 aa30.09■■■□□ 2.41
LINC00543-201ENST00000567234 RRS1Q15050 365 aaKnown RBP30.09■■■□□ 2.41
LINC00543-201ENST00000567234 PMFBP1Q8TBY8 1022 aa30.09■■■□□ 2.41
LINC00543-201ENST00000567234 PDE3AQ14432 1141 aa30.08■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms