RNA–Protein interactions for RNA: ENST00000567143.1

GINS3-206, Transcript of GINS complex subunit 3, humanhuman

Gene GINS3, Length 3,202 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-206ENST00000567143 USP54Q70EL1 1684 aa8.38□□□□□ -1.07
GINS3-206ENST00000567143 AHDC1Q5TGY3 1603 aaPredicted RBP8.38□□□□□ -1.07
GINS3-206ENST00000567143 MS4A1P11836 297 aa8.38□□□□□ -1.07
GINS3-206ENST00000567143 CFAP70Q5T0N1 1121 aa8.38□□□□□ -1.07
GINS3-206ENST00000567143 C14orf93Q9H972 538 aaKnown RBP8.38□□□□□ -1.07
GINS3-206ENST00000567143 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.37□□□□□ -1.07
GINS3-206ENST00000567143 SEC24BO95487 1268 aa8.37□□□□□ -1.07
GINS3-206ENST00000567143 IGHDP01880 384 aa8.37□□□□□ -1.07
GINS3-206ENST00000567143 FMN2Q9NZ56 1722 aa8.37□□□□□ -1.07
GINS3-206ENST00000567143 GSE1Q14687 1217 aa8.37□□□□□ -1.07
GINS3-206ENST00000567143 FAM161AQ3B820 660 aa8.37□□□□□ -1.07
GINS3-206ENST00000567143 DDRGK1Q96HY6 314 aa8.37□□□□□ -1.07
GINS3-206ENST00000567143 NHSL1Q5SYE7 1610 aa8.37□□□□□ -1.07
GINS3-206ENST00000567143 MST1RQ04912 1400 aa8.37□□□□□ -1.07
GINS3-206ENST00000567143 C8orf34Q49A92 452 aa8.37□□□□□ -1.07
GINS3-206ENST00000567143 CENPQQ7L2Z9 268 aaPredicted RBP8.36□□□□□ -1.07
GINS3-206ENST00000567143 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.36□□□□□ -1.07
GINS3-206ENST00000567143 CERKQ8TCT0 537 aa8.36□□□□□ -1.07
GINS3-206ENST00000567143 TOPAZ1Q8N9V7 1692 aa8.36□□□□□ -1.07
GINS3-206ENST00000567143 AMER1Q5JTC6 1135 aaPredicted RBP8.36□□□□□ -1.07
GINS3-206ENST00000567143 TRAK1Q9UPV9 953 aa8.36□□□□□ -1.07
GINS3-206ENST00000567143 ADGRL3Q9HAR2 1447 aa8.36□□□□□ -1.07
GINS3-206ENST00000567143 GZF1Q9H116 711 aaPredicted RBP8.35□□□□□ -1.07
GINS3-206ENST00000567143 METP08581 1390 aa8.35□□□□□ -1.07
GINS3-206ENST00000567143 KIF1AQ12756 1690 aa8.35□□□□□ -1.07
GINS3-206ENST00000567143 TMEM132EQ6IEE7 984 aa8.35□□□□□ -1.07
GINS3-206ENST00000567143 COL22A1Q8NFW1 1626 aaPredicted RBP8.34□□□□□ -1.07
GINS3-206ENST00000567143 SLFN5Q08AF3 891 aa8.34□□□□□ -1.07
GINS3-206ENST00000567143 YTHDC2Q9H6S0 1430 aaKnown RBP8.34□□□□□ -1.07
GINS3-206ENST00000567143 SBNO2Q9Y2G9 1366 aa8.34□□□□□ -1.07
GINS3-206ENST00000567143 KDM2BQ8NHM5 1336 aa8.33□□□□□ -1.08
GINS3-206ENST00000567143 FBXO41Q8TF61 875 aa8.33□□□□□ -1.08
GINS3-206ENST00000567143 SLC12A5Q9H2X9 1139 aa8.33□□□□□ -1.08
GINS3-206ENST00000567143 SHPRHQ149N8 1683 aa8.33□□□□□ -1.08
GINS3-206ENST00000567143 POGKQ9P215 609 aa8.33□□□□□ -1.08
GINS3-206ENST00000567143 ANKARQ7Z5J8 1434 aa8.32□□□□□ -1.08
GINS3-206ENST00000567143 ADGRF5Q8IZF2 1346 aa8.32□□□□□ -1.08
GINS3-206ENST00000567143 ZNF335Q9H4Z2 1342 aaPredicted RBP8.32□□□□□ -1.08
GINS3-206ENST00000567143 CARD14Q9BXL6 1004 aa8.32□□□□□ -1.08
GINS3-206ENST00000567143 USP32Q8NFA0 1604 aa8.32□□□□□ -1.08
GINS3-206ENST00000567143 CENPJQ9HC77 1338 aaPredicted RBP8.32□□□□□ -1.08
GINS3-206ENST00000567143 MORC1Q86VD1 984 aa8.31□□□□□ -1.08
GINS3-206ENST00000567143 USP35Q9P2H5 1018 aa8.31□□□□□ -1.08
GINS3-206ENST00000567143 ITSN1Q15811 1721 aa8.31□□□□□ -1.08
GINS3-206ENST00000567143 RLBP1P12271 317 aa8.31□□□□□ -1.08
GINS3-206ENST00000567143 U2SURPO15042 1029 aaKnown RBP8.3□□□□□ -1.08
GINS3-206ENST00000567143 TSR2Q969E8 191 aaKnown RBP8.3□□□□□ -1.08
GINS3-206ENST00000567143 COL16A1Q07092 1604 aaPredicted RBP8.3□□□□□ -1.08
GINS3-206ENST00000567143 PUS7Q96PZ0 661 aaKnown RBP8.3□□□□□ -1.08
GINS3-206ENST00000567143 STK26Q9P289 416 aa8.3□□□□□ -1.08
GINS3-206ENST00000567143 U2AF1L5P0DN76 240 aaPredicted RBP8.29□□□□□ -1.08
GINS3-206ENST00000567143 PRKCSHP14314 528 aaPredicted RBP8.29□□□□□ -1.08
GINS3-206ENST00000567143 U2AF1Q01081 240 aaKnown RBP eCLIP8.29□□□□□ -1.08
GINS3-206ENST00000567143 STAG3Q9UJ98 1225 aa8.29□□□□□ -1.08
GINS3-206ENST00000567143 ROBO2Q9HCK4 1378 aa8.29□□□□□ -1.08
GINS3-206ENST00000567143 CDCA8Q53HL2 280 aa8.29□□□□□ -1.08
GINS3-206ENST00000567143 WWC1Q8IX03 1113 aa8.29□□□□□ -1.08
GINS3-206ENST00000567143 TCP11L2Q8N4U5 519 aa8.29□□□□□ -1.08
GINS3-206ENST00000567143 ROBO1Q9Y6N7 1651 aa8.29□□□□□ -1.08
GINS3-206ENST00000567143 MFAP1P55081 439 aaKnown RBP8.29□□□□□ -1.08
GINS3-206ENST00000567143 PCDHB15Q9Y5E8 787 aa8.29□□□□□ -1.08
GINS3-206ENST00000567143 TMEM94Q12767 1356 aa8.29□□□□□ -1.08
GINS3-206ENST00000567143 BLMP54132 1417 aaPredicted RBP8.28□□□□□ -1.08
GINS3-206ENST00000567143 TULP4Q9NRJ4 1543 aa8.28□□□□□ -1.08
GINS3-206ENST00000567143 E9PSI1 815 aa8.28□□□□□ -1.08
GINS3-206ENST00000567143 MED1Q15648 1581 aaPredicted RBP8.28□□□□□ -1.08
GINS3-206ENST00000567143 MTHFSP49914 203 aa8.28□□□□□ -1.08
GINS3-206ENST00000567143 TRPM3Q9HCF6 1732 aaPredicted RBP8.28□□□□□ -1.08
GINS3-206ENST00000567143 EIF3AQ14152 1382 aaKnown RBP8.28□□□□□ -1.08
GINS3-206ENST00000567143 QRICH2Q9H0J4 1663 aa8.28□□□□□ -1.08
GINS3-206ENST00000567143 CRYBG1Q9Y4K1 1723 aa8.28□□□□□ -1.08
GINS3-206ENST00000567143 FOXD4L1Q9NU39 408 aa8.27□□□□□ -1.08
GINS3-206ENST00000567143 FBLN1P23142 703 aa8.27□□□□□ -1.09
GINS3-206ENST00000567143 FTSJ3Q8IY81 847 aaKnown RBP8.27□□□□□ -1.09
GINS3-206ENST00000567143 ZNF521Q96K83 1311 aa8.27□□□□□ -1.09
GINS3-206ENST00000567143 PDZRN3Q9UPQ7 1066 aa8.26□□□□□ -1.09
GINS3-206ENST00000567143 AMOTL2Q9Y2J4 779 aa8.26□□□□□ -1.09
GINS3-206ENST00000567143 C19orf44Q9H6X5 657 aa8.26□□□□□ -1.09
GINS3-206ENST00000567143 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.26□□□□□ -1.09
GINS3-206ENST00000567143 MARF1Q9Y4F3 1742 aaKnown RBP8.26□□□□□ -1.09
GINS3-206ENST00000567143 UPF2Q9HAU5 1272 aaKnown RBP8.25□□□□□ -1.09
GINS3-206ENST00000567143 MSH6P52701 1360 aa8.25□□□□□ -1.09
GINS3-206ENST00000567143 ELL2O00472 640 aaPredicted RBP8.25□□□□□ -1.09
GINS3-206ENST00000567143 ITPRIPQ8IWB1 547 aa8.25□□□□□ -1.09
GINS3-206ENST00000567143 CABP2Q9NPB3 220 aa8.25□□□□□ -1.09
GINS3-206ENST00000567143 ABCC6O95255 1503 aa8.25□□□□□ -1.09
GINS3-206ENST00000567143 C1orf167Q5SNV9 1468 aa8.25□□□□□ -1.09
GINS3-206ENST00000567143 NRKQ7Z2Y5 1582 aa8.25□□□□□ -1.09
GINS3-206ENST00000567143 GGNBP2Q9H3C7 697 aa8.25□□□□□ -1.09
GINS3-206ENST00000567143 ALS2Q96Q42 1657 aa8.25□□□□□ -1.09
GINS3-206ENST00000567143 AKAP12Q02952 1782 aa8.24□□□□□ -1.09
GINS3-206ENST00000567143 RARSP54136 660 aaKnown RBP8.24□□□□□ -1.09
GINS3-206ENST00000567143 PXDNQ92626 1479 aa8.24□□□□□ -1.09
GINS3-206ENST00000567143 USP19O94966 1318 aa8.24□□□□□ -1.09
GINS3-206ENST00000567143 BECN1Q14457 450 aa8.24□□□□□ -1.09
GINS3-206ENST00000567143 SMC4Q9NTJ3 1288 aa8.24□□□□□ -1.09
GINS3-206ENST00000567143 CGNL1Q0VF96 1302 aa8.23□□□□□ -1.09
GINS3-206ENST00000567143 PHLPP1O60346 1717 aa8.23□□□□□ -1.09
GINS3-206ENST00000567143 SLC24A1O60721 1099 aa8.23□□□□□ -1.09
GINS3-206ENST00000567143 CADPS2Q86UW7 1296 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms