RNA–Protein interactions for RNA: ENST00000566582.1

LINC01541-201, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 2

Gene LINC01541, Length 2,414 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-201ENST00000566582 NUTM2FA1L443 756 aa11.37□□□□□ -0.59
LINC01541-201ENST00000566582 FBLN1P23142 703 aa11.37□□□□□ -0.59
LINC01541-201ENST00000566582 CCDC27Q2M243 656 aa11.37□□□□□ -0.59
LINC01541-201ENST00000566582 PNNQ9H307 717 aaKnown RBP11.37□□□□□ -0.59
LINC01541-201ENST00000566582 ADAMTS13Q76LX8 1427 aa11.37□□□□□ -0.59
LINC01541-201ENST00000566582 ROBO2Q9HCK4 1378 aa11.36□□□□□ -0.59
LINC01541-201ENST00000566582 NME9Q86XW9 330 aa11.36□□□□□ -0.59
LINC01541-201ENST00000566582 EDC4Q6P2E9 1401 aaKnown RBP11.36□□□□□ -0.59
LINC01541-201ENST00000566582 KNDC1Q76NI1 1749 aa11.36□□□□□ -0.59
LINC01541-201ENST00000566582 CPS1P31327 1500 aa11.36□□□□□ -0.59
LINC01541-201ENST00000566582 NEFMP07197 916 aa11.36□□□□□ -0.59
LINC01541-201ENST00000566582 NCBP3Q53F19 620 aaKnown RBP11.36□□□□□ -0.59
LINC01541-201ENST00000566582 THEMISQ8N1K5 641 aaPredicted RBP11.36□□□□□ -0.59
LINC01541-201ENST00000566582 MYH16Q9H6N6 1097 aa11.36□□□□□ -0.59
LINC01541-201ENST00000566582 C3P01024 1663 aa11.35□□□□□ -0.59
LINC01541-201ENST00000566582 FRAT1Q92837 279 aaPredicted RBP11.35□□□□□ -0.59
LINC01541-201ENST00000566582 COG3Q96JB2 828 aa11.35□□□□□ -0.59
LINC01541-201ENST00000566582 PHF23Q9BUL5 403 aaPredicted RBP11.35□□□□□ -0.59
LINC01541-201ENST00000566582 POLKQ9UBT6 870 aa11.35□□□□□ -0.59
LINC01541-201ENST00000566582 FER1L4A9Z1Z3 1794 aa11.35□□□□□ -0.59
LINC01541-201ENST00000566582 CPSF1Q10570 1443 aaKnown RBP11.35□□□□□ -0.59
LINC01541-201ENST00000566582 ZNF692Q9BU19 519 aaPredicted RBP11.35□□□□□ -0.59
LINC01541-201ENST00000566582 TMPOP42166 694 aaKnown RBP11.34□□□□□ -0.59
LINC01541-201ENST00000566582 PLEKHF1Q96S99 279 aa11.34□□□□□ -0.59
LINC01541-201ENST00000566582 COL3A1P02461 1466 aaPredicted RBP11.34□□□□□ -0.59
LINC01541-201ENST00000566582 FANCIQ9NVI1 1328 aa11.34□□□□□ -0.59
LINC01541-201ENST00000566582 ZRANB1Q9UGI0 708 aa11.34□□□□□ -0.59
LINC01541-201ENST00000566582 AMOTL2Q9Y2J4 779 aa11.34□□□□□ -0.59
LINC01541-201ENST00000566582 RIPK4P57078 832 aa11.33□□□□□ -0.6
LINC01541-201ENST00000566582 EMILIN1Q9Y6C2 1016 aa11.33□□□□□ -0.6
LINC01541-201ENST00000566582 PRR36Q9H6K5 1346 aa11.33□□□□□ -0.6
LINC01541-201ENST00000566582 CDC42BPGQ6DT37 1551 aa11.33□□□□□ -0.6
LINC01541-201ENST00000566582 PNPLA6Q8IY17 1366 aa11.33□□□□□ -0.6
LINC01541-201ENST00000566582 TCERG1O14776 1098 aaKnown RBP11.33□□□□□ -0.6
LINC01541-201ENST00000566582 FCHSD2O94868 740 aa11.32□□□□□ -0.6
LINC01541-201ENST00000566582 RARSP54136 660 aaKnown RBP11.31□□□□□ -0.6
LINC01541-201ENST00000566582 BCL2L13Q9BXK5 485 aa11.31□□□□□ -0.6
LINC01541-201ENST00000566582 ADGRB2O60241 1585 aa11.31□□□□□ -0.6
LINC01541-201ENST00000566582 HMOX1P09601 288 aa11.31□□□□□ -0.6
LINC01541-201ENST00000566582 PRKAR2BP31323 418 aa11.31□□□□□ -0.6
LINC01541-201ENST00000566582 RRS1Q15050 365 aaKnown RBP11.31□□□□□ -0.6
LINC01541-201ENST00000566582 TSR2Q969E8 191 aaKnown RBP11.31□□□□□ -0.6
LINC01541-201ENST00000566582 TBX22Q9Y458 520 aa11.31□□□□□ -0.6
LINC01541-201ENST00000566582 PDE3AQ14432 1141 aa11.3□□□□□ -0.6
LINC01541-201ENST00000566582 CENPQQ7L2Z9 268 aaPredicted RBP11.3□□□□□ -0.6
LINC01541-201ENST00000566582 ACEP12821 1306 aa11.3□□□□□ -0.6
LINC01541-201ENST00000566582 MAP2P11137 1827 aaKnown RBP11.3□□□□□ -0.6
LINC01541-201ENST00000566582 ITSN1Q15811 1721 aa11.3□□□□□ -0.6
LINC01541-201ENST00000566582 PTPRUQ92729 1446 aa11.3□□□□□ -0.6
LINC01541-201ENST00000566582 TRIM35Q9UPQ4 493 aa11.3□□□□□ -0.6
LINC01541-201ENST00000566582 SLIT1O75093 1534 aa11.3□□□□□ -0.6
LINC01541-201ENST00000566582 PANK1Q8TE04 598 aa11.29□□□□□ -0.6
LINC01541-201ENST00000566582 COG6Q9Y2V7 657 aa11.29□□□□□ -0.6
LINC01541-201ENST00000566582 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.29□□□□□ -0.6
LINC01541-201ENST00000566582 ARHGAP23Q9P227 1491 aa11.29□□□□□ -0.6
LINC01541-201ENST00000566582 ERICH6Q7L0X2 663 aa11.29□□□□□ -0.6
LINC01541-201ENST00000566582 SKAP1Q86WV1 359 aa11.28□□□□□ -0.6
LINC01541-201ENST00000566582 RSPH6AQ9H0K4 717 aa11.28□□□□□ -0.6
LINC01541-201ENST00000566582 MON2Q7Z3U7 1717 aa11.28□□□□□ -0.6
LINC01541-201ENST00000566582 EXOSC9Q06265 439 aaKnown RBP11.28□□□□□ -0.6
LINC01541-201ENST00000566582 PMFBP1Q8TBY8 1022 aa11.28□□□□□ -0.6
LINC01541-201ENST00000566582 TTC21BQ7Z4L5 1316 aa11.28□□□□□ -0.6
LINC01541-201ENST00000566582 AATKQ6ZMQ8 1374 aa11.28□□□□□ -0.6
LINC01541-201ENST00000566582 MS4A1P11836 297 aa11.27□□□□□ -0.6
LINC01541-201ENST00000566582 ANP32AP39687 249 aaKnown RBP11.27□□□□□ -0.6
LINC01541-201ENST00000566582 CLUAP1Q96AJ1 413 aa11.27□□□□□ -0.6
LINC01541-201ENST00000566582 LAS1LQ9Y4W2 734 aaKnown RBP11.27□□□□□ -0.6
LINC01541-201ENST00000566582 KDM2BQ8NHM5 1336 aa11.27□□□□□ -0.6
LINC01541-201ENST00000566582 AKAP12Q02952 1782 aa11.27□□□□□ -0.61
LINC01541-201ENST00000566582 PLEKHG3A1L390 1219 aa11.27□□□□□ -0.61
LINC01541-201ENST00000566582 SOX12O15370 315 aa11.27□□□□□ -0.61
LINC01541-201ENST00000566582 IL13P35225 146 aa11.27□□□□□ -0.61
LINC01541-201ENST00000566582 NGDNQ8NEJ9 315 aaKnown RBP11.27□□□□□ -0.61
LINC01541-201ENST00000566582 LRRC7Q96NW7 1537 aa11.27□□□□□ -0.61
LINC01541-201ENST00000566582 CT47B1P0C2W7 299 aaPredicted RBP11.26□□□□□ -0.61
LINC01541-201ENST00000566582 IL16Q14005 1332 aa11.26□□□□□ -0.61
LINC01541-201ENST00000566582 CDK12Q9NYV4 1490 aaPredicted RBP11.26□□□□□ -0.61
LINC01541-201ENST00000566582 MSH5O43196 834 aa11.26□□□□□ -0.61
LINC01541-201ENST00000566582 PDE4AP27815 886 aa11.26□□□□□ -0.61
LINC01541-201ENST00000566582 SMC4Q9NTJ3 1288 aa11.26□□□□□ -0.61
LINC01541-201ENST00000566582 FTSJ3Q8IY81 847 aaKnown RBP11.25□□□□□ -0.61
LINC01541-201ENST00000566582 PHACTR3Q96KR7 559 aa11.25□□□□□ -0.61
LINC01541-201ENST00000566582 USP6P35125 1406 aa11.25□□□□□ -0.61
LINC01541-201ENST00000566582 NFE2L2Q16236 605 aa11.25□□□□□ -0.61
LINC01541-201ENST00000566582 PTCH1Q13635 1447 aa11.24□□□□□ -0.61
LINC01541-201ENST00000566582 KCNA6P17658 529 aa11.24□□□□□ -0.61
LINC01541-201ENST00000566582 ZKSCAN2Q63HK3 967 aa11.24□□□□□ -0.61
LINC01541-201ENST00000566582 NPM2Q86SE8 214 aaKnown RBP11.24□□□□□ -0.61
LINC01541-201ENST00000566582 ANP32EQ9BTT0 268 aa11.24□□□□□ -0.61
LINC01541-201ENST00000566582 DIP2AQ14689 1571 aa11.24□□□□□ -0.61
LINC01541-201ENST00000566582 CEP170BQ9Y4F5 1589 aaPredicted RBP11.24□□□□□ -0.61
LINC01541-201ENST00000566582 ANKLE2Q86XL3 938 aa11.24□□□□□ -0.61
LINC01541-201ENST00000566582 TNNQ9UQP3 1299 aa11.24□□□□□ -0.61
LINC01541-201ENST00000566582 RIMS1Q86UR5 1692 aaKnown RBP11.23□□□□□ -0.61
LINC01541-201ENST00000566582 RLBP1P12271 317 aa11.23□□□□□ -0.61
LINC01541-201ENST00000566582 RGS3P49796 1198 aa11.23□□□□□ -0.61
LINC01541-201ENST00000566582 CALD1Q05682 793 aaKnown RBP11.23□□□□□ -0.61
LINC01541-201ENST00000566582 TOPAZ1Q8N9V7 1692 aa11.23□□□□□ -0.61
LINC01541-201ENST00000566582 BACH2Q9BYV9 841 aa11.23□□□□□ -0.61
LINC01541-201ENST00000566582 DZIP1LQ8IYY4 767 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms