RNA–Protein interactions for RNA: ENST00000566385.2

LINC00562-201, long intergenic non-protein coding RNA 562, humanhuman

BASIC

Gene LINC00562, Length 2,470 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00562-201ENST00000566385 APAF1O14727 1248 aa15.09■□□□□ 0.01
LINC00562-201ENST00000566385 ZNF692Q9BU19 519 aaPredicted RBP15.09■□□□□ 0.01
LINC00562-201ENST00000566385 NALCNQ8IZF0 1738 aa15.09■□□□□ 0.01
LINC00562-201ENST00000566385 MAP2P11137 1827 aaKnown RBP15.08■□□□□ 0
LINC00562-201ENST00000566385 PPM1GO15355 546 aaPredicted RBP15.07■□□□□ 0
LINC00562-201ENST00000566385 POLKQ9UBT6 870 aa15.07■□□□□ 0
LINC00562-201ENST00000566385 TTC21BQ7Z4L5 1316 aa15.07■□□□□ 0
LINC00562-201ENST00000566385 CFAP53Q96M91 514 aa15.07■□□□□ 0
LINC00562-201ENST00000566385 USP6P35125 1406 aa15.06■□□□□ 0
LINC00562-201ENST00000566385 NRKQ7Z2Y5 1582 aa15.06■□□□□ 0
LINC00562-201ENST00000566385 EMILIN1Q9Y6C2 1016 aa15.06■□□□□ 0
LINC00562-201ENST00000566385 COL3A1P02461 1466 aaPredicted RBP15.06■□□□□ 0
LINC00562-201ENST00000566385 FMN2Q9NZ56 1722 aa15.05■□□□□ 0
LINC00562-201ENST00000566385 RRS1Q15050 365 aaKnown RBP15.05■□□□□ -0
LINC00562-201ENST00000566385 NGDNQ8NEJ9 315 aaKnown RBP15.05■□□□□ -0
LINC00562-201ENST00000566385 COG3Q96JB2 828 aa15.05■□□□□ -0
LINC00562-201ENST00000566385 ZNF521Q96K83 1311 aa15.04■□□□□ -0
LINC00562-201ENST00000566385 NEFLP07196 543 aa15.04■□□□□ -0
LINC00562-201ENST00000566385 U2AF1L5P0DN76 240 aaPredicted RBP15.04■□□□□ -0
LINC00562-201ENST00000566385 U2AF1Q01081 240 aaKnown RBP eCLIP15.04■□□□□ -0
LINC00562-201ENST00000566385 SSH2Q76I76 1423 aa15.04■□□□□ -0
LINC00562-201ENST00000566385 U2SURPO15042 1029 aaKnown RBP15.03■□□□□ -0
LINC00562-201ENST00000566385 RRP7AQ9Y3A4 280 aaKnown RBP15.03■□□□□ -0
LINC00562-201ENST00000566385 PNPLA6Q8IY17 1366 aa15.03■□□□□ -0
LINC00562-201ENST00000566385 PDE3BQ13370 1112 aa15.03■□□□□ -0
LINC00562-201ENST00000566385 NEUROD2Q15784 382 aa15.03■□□□□ -0
LINC00562-201ENST00000566385 DMRT2Q9Y5R5 561 aa15.03■□□□□ -0
LINC00562-201ENST00000566385 SPINK5Q9NQ38 1064 aaPredicted RBP15.02■□□□□ -0
LINC00562-201ENST00000566385 C14orf37Q86TY3 774 aa15.02□□□□□ -0.01
LINC00562-201ENST00000566385 ADGRL3Q9HAR2 1447 aa15.01□□□□□ -0.01
LINC00562-201ENST00000566385 TCP11L2Q8N4U5 519 aa15.01□□□□□ -0.01
LINC00562-201ENST00000566385 ANKARQ7Z5J8 1434 aa15.01□□□□□ -0.01
LINC00562-201ENST00000566385 SOX12O15370 315 aa15.01□□□□□ -0.01
LINC00562-201ENST00000566385 DIAPH1O60610 1272 aaKnown RBP15□□□□□ -0.01
LINC00562-201ENST00000566385 PROSER2Q86WR7 435 aaPredicted RBP15□□□□□ -0.01
LINC00562-201ENST00000566385 RUNDC1Q96C34 613 aa15□□□□□ -0.01
LINC00562-201ENST00000566385 NWD1Q149M9 1564 aa15□□□□□ -0.01
LINC00562-201ENST00000566385 STRCP1A6NGW2 1772 aa15□□□□□ -0.01
LINC00562-201ENST00000566385 OVOS2A0A0J9YW53 1432 aa14.99□□□□□ -0.01
LINC00562-201ENST00000566385 OVOS2Q6IE36 1432 aa14.99□□□□□ -0.01
LINC00562-201ENST00000566385 LMTK3Q96Q04 1460 aa14.99□□□□□ -0.01
LINC00562-201ENST00000566385 NUTM2GQ5VZR2 741 aa14.99□□□□□ -0.01
LINC00562-201ENST00000566385 GOLGA2Q08379 1002 aa14.98□□□□□ -0.01
LINC00562-201ENST00000566385 ESCO1Q5FWF5 840 aa14.98□□□□□ -0.01
LINC00562-201ENST00000566385 DUSP27Q5VZP5 1158 aa14.98□□□□□ -0.01
LINC00562-201ENST00000566385 PLEKHF1Q96S99 279 aa14.98□□□□□ -0.01
LINC00562-201ENST00000566385 AATKQ6ZMQ8 1374 aa14.98□□□□□ -0.01
LINC00562-201ENST00000566385 IQSEC2Q5JU85 1478 aa14.98□□□□□ -0.01
LINC00562-201ENST00000566385 ORAI2Q96SN7 254 aa14.98□□□□□ -0.01
LINC00562-201ENST00000566385 PHF8Q9UPP1 1060 aa14.98□□□□□ -0.01
LINC00562-201ENST00000566385 WWC1Q8IX03 1113 aa14.97□□□□□ -0.01
LINC00562-201ENST00000566385 PIK3C2AO00443 1686 aa14.97□□□□□ -0.01
LINC00562-201ENST00000566385 RNF123Q5XPI4 1314 aa14.96□□□□□ -0.01
LINC00562-201ENST00000566385 PAK3O75914 559 aaPredicted RBP14.95□□□□□ -0.02
LINC00562-201ENST00000566385 SLFN5Q08AF3 891 aa14.95□□□□□ -0.02
LINC00562-201ENST00000566385 RCAN3Q9UKA8 241 aa14.95□□□□□ -0.02
LINC00562-201ENST00000566385 STRCQ7RTU9 1775 aa14.95□□□□□ -0.02
LINC00562-201ENST00000566385 TTC21AQ8NDW8 1320 aa14.95□□□□□ -0.02
LINC00562-201ENST00000566385 HMOX1P09601 288 aa14.95□□□□□ -0.02
LINC00562-201ENST00000566385 IL13P35225 146 aa14.94□□□□□ -0.02
LINC00562-201ENST00000566385 CDK12Q9NYV4 1490 aaPredicted RBP14.94□□□□□ -0.02
LINC00562-201ENST00000566385 NLRP6P59044 892 aa14.94□□□□□ -0.02
LINC00562-201ENST00000566385 USP31Q70CQ4 1352 aa14.94□□□□□ -0.02
LINC00562-201ENST00000566385 XPCQ01831 940 aaPredicted RBP14.93□□□□□ -0.02
LINC00562-201ENST00000566385 TRMT2AQ8IZ69 625 aaKnown RBP14.93□□□□□ -0.02
LINC00562-201ENST00000566385 TMEM94Q12767 1356 aa14.93□□□□□ -0.02
LINC00562-201ENST00000566385 PEAK1Q9H792 1746 aa14.93□□□□□ -0.02
LINC00562-201ENST00000566385 FOXO3O43524 673 aa14.93□□□□□ -0.02
LINC00562-201ENST00000566385 HSP90AB2PQ58FF8 381 aa14.93□□□□□ -0.02
LINC00562-201ENST00000566385 ABTB2Q8N961 1025 aa14.93□□□□□ -0.02
LINC00562-201ENST00000566385 PHF23Q9BUL5 403 aaPredicted RBP14.93□□□□□ -0.02
LINC00562-201ENST00000566385 C19orf44Q9H6X5 657 aa14.92□□□□□ -0.02
LINC00562-201ENST00000566385 MARF1Q9Y4F3 1742 aaKnown RBP14.92□□□□□ -0.02
LINC00562-201ENST00000566385 RSPH6AQ9H0K4 717 aa14.92□□□□□ -0.02
LINC00562-201ENST00000566385 LRRC7Q96NW7 1537 aa14.92□□□□□ -0.02
LINC00562-201ENST00000566385 MAP3K19Q56UN5 1328 aa14.91□□□□□ -0.02
LINC00562-201ENST00000566385 PRKAR2BP31323 418 aa14.91□□□□□ -0.02
LINC00562-201ENST00000566385 PHACTR3Q96KR7 559 aa14.91□□□□□ -0.02
LINC00562-201ENST00000566385 PLIN1O60240 522 aa14.9□□□□□ -0.02
LINC00562-201ENST00000566385 TMPOP42166 694 aaKnown RBP14.9□□□□□ -0.02
LINC00562-201ENST00000566385 PSME1Q06323 249 aa14.9□□□□□ -0.02
LINC00562-201ENST00000566385 FCHSD2O94868 740 aa14.9□□□□□ -0.02
LINC00562-201ENST00000566385 EIF4A2Q14240 407 aaKnown RBP14.9□□□□□ -0.02
LINC00562-201ENST00000566385 RRP1P56182 461 aaKnown RBP14.89□□□□□ -0.03
LINC00562-201ENST00000566385 NGEFQ8N5V2 710 aa14.89□□□□□ -0.03
LINC00562-201ENST00000566385 TRIM35Q9UPQ4 493 aa14.89□□□□□ -0.03
LINC00562-201ENST00000566385 E9PSI1 815 aa14.89□□□□□ -0.03
LINC00562-201ENST00000566385 MAPK8IP3Q9UPT6 1336 aa14.89□□□□□ -0.03
LINC00562-201ENST00000566385 C1orf167Q5SNV9 1468 aa14.88□□□□□ -0.03
LINC00562-201ENST00000566385 PLEKHG5O94827 1062 aa14.88□□□□□ -0.03
LINC00562-201ENST00000566385 CCDC27Q2M243 656 aa14.88□□□□□ -0.03
LINC00562-201ENST00000566385 AEBP1Q8IUX7 1158 aa14.88□□□□□ -0.03
LINC00562-201ENST00000566385 DDX17Q92841 729 aaKnown RBP14.88□□□□□ -0.03
LINC00562-201ENST00000566385 ZNF335Q9H4Z2 1342 aaPredicted RBP14.87□□□□□ -0.03
LINC00562-201ENST00000566385 RIPK4P57078 832 aa14.87□□□□□ -0.03
LINC00562-201ENST00000566385 XIRP1Q702N8 1843 aaKnown RBP14.86□□□□□ -0.03
LINC00562-201ENST00000566385 ATF3P18847 181 aa14.86□□□□□ -0.03
LINC00562-201ENST00000566385 WDR63Q8IWG1 891 aa14.85□□□□□ -0.03
LINC00562-201ENST00000566385 MST1RQ04912 1400 aa14.85□□□□□ -0.03
LINC00562-201ENST00000566385 SULT6B1Q6IMI4 303 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms