RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 SBNO1A3KN83 1393 aa11.41□□□□□ -0.58
CDH13-208ENST00000566333 XPCQ01831 940 aaPredicted RBP11.4□□□□□ -0.58
CDH13-208ENST00000566333 CDCA8Q53HL2 280 aa11.4□□□□□ -0.58
CDH13-208ENST00000566333 SLC12A5Q9H2X9 1139 aa11.4□□□□□ -0.58
CDH13-208ENST00000566333 EDC4Q6P2E9 1401 aaKnown RBP11.4□□□□□ -0.58
CDH13-208ENST00000566333 PNPLA6Q8IY17 1366 aa11.4□□□□□ -0.59
CDH13-208ENST00000566333 ADRA2BP18089 450 aa11.39□□□□□ -0.59
CDH13-208ENST00000566333 NGDNQ8NEJ9 315 aaKnown RBP11.38□□□□□ -0.59
CDH13-208ENST00000566333 SLIT3O75094 1523 aa11.38□□□□□ -0.59
CDH13-208ENST00000566333 BRD4O60885 1362 aaPredicted RBP11.38□□□□□ -0.59
CDH13-208ENST00000566333 KTN1Q86UP2 1357 aaKnown RBP11.38□□□□□ -0.59
CDH13-208ENST00000566333 LRP6O75581 1613 aa11.38□□□□□ -0.59
CDH13-208ENST00000566333 SPATA31A3Q5VYP0 1347 aa11.37□□□□□ -0.59
CDH13-208ENST00000566333 LTN1O94822 1766 aa11.37□□□□□ -0.59
CDH13-208ENST00000566333 ILDR1Q86SU0 546 aaPredicted RBP11.37□□□□□ -0.59
CDH13-208ENST00000566333 OVOS2A0A0J9YW53 1432 aa11.36□□□□□ -0.59
CDH13-208ENST00000566333 OVOS2Q6IE36 1432 aa11.36□□□□□ -0.59
CDH13-208ENST00000566333 NSD3Q9BZ95 1437 aa11.36□□□□□ -0.59
CDH13-208ENST00000566333 KRT28Q7Z3Y7 464 aa11.36□□□□□ -0.59
CDH13-208ENST00000566333 TMC1Q8TDI8 760 aa11.36□□□□□ -0.59
CDH13-208ENST00000566333 JCADQ9P266 1359 aa11.36□□□□□ -0.59
CDH13-208ENST00000566333 PLCH1Q4KWH8 1693 aa11.36□□□□□ -0.59
CDH13-208ENST00000566333 NFAT5O94916 1531 aa11.35□□□□□ -0.59
CDH13-208ENST00000566333 ARHGEF10O15013 1369 aa11.35□□□□□ -0.59
CDH13-208ENST00000566333 PSME1Q06323 249 aa11.34□□□□□ -0.59
CDH13-208ENST00000566333 POLR3GLQ9BT43 218 aa11.34□□□□□ -0.59
CDH13-208ENST00000566333 TERF2IPQ9NYB0 399 aa11.34□□□□□ -0.59
CDH13-208ENST00000566333 USP19O94966 1318 aa11.34□□□□□ -0.59
CDH13-208ENST00000566333 TTC21BQ7Z4L5 1316 aa11.34□□□□□ -0.59
CDH13-208ENST00000566333 HDGFL2Q7Z4V5 671 aaPredicted RBP11.33□□□□□ -0.6
CDH13-208ENST00000566333 CARD14Q9BXL6 1004 aa11.33□□□□□ -0.6
CDH13-208ENST00000566333 COL18A1P39060 1754 aa11.33□□□□□ -0.6
CDH13-208ENST00000566333 LMO7Q8WWI1 1683 aa11.33□□□□□ -0.6
CDH13-208ENST00000566333 TTC21AQ8NDW8 1320 aa11.33□□□□□ -0.6
CDH13-208ENST00000566333 NRAPQ86VF7 1730 aa11.32□□□□□ -0.6
CDH13-208ENST00000566333 USP31Q70CQ4 1352 aa11.32□□□□□ -0.6
CDH13-208ENST00000566333 RGPD5Q99666 1765 aa11.32□□□□□ -0.6
CDH13-208ENST00000566333 LRRC59Q96AG4 307 aaKnown RBP11.32□□□□□ -0.6
CDH13-208ENST00000566333 ZNF692Q9BU19 519 aaPredicted RBP11.32□□□□□ -0.6
CDH13-208ENST00000566333 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.32□□□□□ -0.6
CDH13-208ENST00000566333 NWD2Q9ULI1 1742 aa11.32□□□□□ -0.6
CDH13-208ENST00000566333 COL14A1Q05707 1796 aaKnown RBP11.31□□□□□ -0.6
CDH13-208ENST00000566333 MAP2P11137 1827 aaKnown RBP11.3□□□□□ -0.6
CDH13-208ENST00000566333 PEAK1Q9H792 1746 aa11.3□□□□□ -0.6
CDH13-208ENST00000566333 PAK3O75914 559 aaPredicted RBP11.3□□□□□ -0.6
CDH13-208ENST00000566333 NME9Q86XW9 330 aa11.3□□□□□ -0.6
CDH13-208ENST00000566333 PANK3Q9H999 370 aa11.3□□□□□ -0.6
CDH13-208ENST00000566333 SPATA31A6Q5VVP1 1343 aa11.3□□□□□ -0.6
CDH13-208ENST00000566333 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.29□□□□□ -0.6
CDH13-208ENST00000566333 ZRANB1Q9UGI0 708 aa11.29□□□□□ -0.6
CDH13-208ENST00000566333 ABCC6O95255 1503 aa11.29□□□□□ -0.6
CDH13-208ENST00000566333 PER1O15534 1290 aaPredicted RBP11.27□□□□□ -0.61
CDH13-208ENST00000566333 NUTM2GQ5VZR2 741 aa11.27□□□□□ -0.61
CDH13-208ENST00000566333 ABTB2Q8N961 1025 aa11.27□□□□□ -0.61
CDH13-208ENST00000566333 CABLES1Q8TDN4 633 aa11.27□□□□□ -0.61
CDH13-208ENST00000566333 NSD2O96028 1365 aa11.27□□□□□ -0.61
CDH13-208ENST00000566333 WNK3Q9BYP7 1800 aa11.26□□□□□ -0.61
CDH13-208ENST00000566333 ZNF316A6NFI3 1004 aaPredicted RBP11.26□□□□□ -0.61
CDH13-208ENST00000566333 FYB1O15117 783 aa11.26□□□□□ -0.61
CDH13-208ENST00000566333 AMER1Q5JTC6 1135 aaPredicted RBP11.26□□□□□ -0.61
CDH13-208ENST00000566333 LMOD2Q6P5Q4 547 aa11.26□□□□□ -0.61
CDH13-208ENST00000566333 CGNL1Q0VF96 1302 aa11.26□□□□□ -0.61
CDH13-208ENST00000566333 CPDO75976 1380 aa11.26□□□□□ -0.61
CDH13-208ENST00000566333 NPC1L1Q9UHC9 1359 aa11.26□□□□□ -0.61
CDH13-208ENST00000566333 NLRP6P59044 892 aa11.25□□□□□ -0.61
CDH13-208ENST00000566333 SLIT2O94813 1529 aa11.25□□□□□ -0.61
CDH13-208ENST00000566333 FAM208AQ9UK61 1670 aaKnown RBP11.24□□□□□ -0.61
CDH13-208ENST00000566333 RGPD2P0DJD1 1756 aa11.24□□□□□ -0.61
CDH13-208ENST00000566333 NLRP13Q86W25 1043 aa11.24□□□□□ -0.61
CDH13-208ENST00000566333 GGNBP2Q9H3C7 697 aa11.24□□□□□ -0.61
CDH13-208ENST00000566333 KIAA0232Q92628 1395 aa11.24□□□□□ -0.61
CDH13-208ENST00000566333 SMG6Q86US8 1419 aaKnown RBP11.24□□□□□ -0.61
CDH13-208ENST00000566333 CAMTA1Q9Y6Y1 1673 aa11.24□□□□□ -0.61
CDH13-208ENST00000566333 NUTM2BA6NNL0 878 aaPredicted RBP11.22□□□□□ -0.61
CDH13-208ENST00000566333 NUTM2EB1AL46 878 aaPredicted RBP11.22□□□□□ -0.61
CDH13-208ENST00000566333 PLEKHG5O94827 1062 aa11.22□□□□□ -0.61
CDH13-208ENST00000566333 GCP02774 474 aa11.22□□□□□ -0.61
CDH13-208ENST00000566333 NUTM2AQ8IVF1 878 aaPredicted RBP11.22□□□□□ -0.61
CDH13-208ENST00000566333 AATKQ6ZMQ8 1374 aa11.21□□□□□ -0.61
CDH13-208ENST00000566333 DDX10Q13206 875 aaKnown RBP11.21□□□□□ -0.61
CDH13-208ENST00000566333 COG3Q96JB2 828 aa11.21□□□□□ -0.61
CDH13-208ENST00000566333 KNSTRNQ9Y448 316 aa11.21□□□□□ -0.61
CDH13-208ENST00000566333 RGPD1P0DJD0 1748 aa11.21□□□□□ -0.62
CDH13-208ENST00000566333 COL5A2P05997 1499 aaPredicted RBP11.2□□□□□ -0.62
CDH13-208ENST00000566333 BCL9LQ86UU0 1499 aa11.2□□□□□ -0.62
CDH13-208ENST00000566333 RTL1A6NKG5 1358 aa11.2□□□□□ -0.62
CDH13-208ENST00000566333 ADAMTS2O95450 1211 aa11.2□□□□□ -0.62
CDH13-208ENST00000566333 GLI3P10071 1580 aa11.2□□□□□ -0.62
CDH13-208ENST00000566333 CDK12Q9NYV4 1490 aaPredicted RBP11.19□□□□□ -0.62
CDH13-208ENST00000566333 PARD3Q8TEW0 1356 aa11.19□□□□□ -0.62
CDH13-208ENST00000566333 SOX12O15370 315 aa11.19□□□□□ -0.62
CDH13-208ENST00000566333 FBLN1P23142 703 aa11.19□□□□□ -0.62
CDH13-208ENST00000566333 ARHGEF25Q86VW2 580 aa11.19□□□□□ -0.62
CDH13-208ENST00000566333 KCNH5Q8NCM2 988 aa11.19□□□□□ -0.62
CDH13-208ENST00000566333 COL3A1P02461 1466 aaPredicted RBP11.19□□□□□ -0.62
CDH13-208ENST00000566333 MAP3K19Q56UN5 1328 aa11.18□□□□□ -0.62
CDH13-208ENST00000566333 HAP1P54257 671 aaPredicted RBP11.18□□□□□ -0.62
CDH13-208ENST00000566333 ZC3H6P61129 1189 aaKnown RBP11.18□□□□□ -0.62
CDH13-208ENST00000566333 BLMP54132 1417 aaPredicted RBP11.18□□□□□ -0.62
CDH13-208ENST00000566333 FAM83GA6ND36 823 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms