RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 GIGYF2Q6Y7W6 1299 aaKnown RBP6.6□□□□□ -1.35
SMG1-212ENST00000566328 IRF7Q92985 503 aa6.6□□□□□ -1.35
SMG1-212ENST00000566328 BEGAINQ9BUH8 593 aa6.6□□□□□ -1.35
SMG1-212ENST00000566328 TRIM46Q7Z4K8 759 aa6.59□□□□□ -1.35
SMG1-212ENST00000566328 LORP23490 312 aaPredicted RBP6.58□□□□□ -1.36
SMG1-212ENST00000566328 CTHP32929 405 aa6.58□□□□□ -1.36
SMG1-212ENST00000566328 SCARF1Q14162 830 aa6.58□□□□□ -1.36
SMG1-212ENST00000566328 LYPD8Q6UX82 237 aa6.58□□□□□ -1.36
SMG1-212ENST00000566328 FAM174AQ8TBP5 190 aa6.58□□□□□ -1.36
SMG1-212ENST00000566328 GMPRP36959 345 aa6.57□□□□□ -1.36
SMG1-212ENST00000566328 NNTQ13423 1086 aa6.57□□□□□ -1.36
SMG1-212ENST00000566328 ZFP42Q96MM3 310 aa6.57□□□□□ -1.36
SMG1-212ENST00000566328 TBC1D2Q9BYX2 928 aa6.57□□□□□ -1.36
SMG1-212ENST00000566328 TLL2Q9Y6L7 1015 aa6.57□□□□□ -1.36
SMG1-212ENST00000566328 RSBN1LQ6PCB5 846 aaPredicted RBP6.56□□□□□ -1.36
SMG1-212ENST00000566328 ZSCAN1Q8NBB4 408 aa6.56□□□□□ -1.36
SMG1-212ENST00000566328 ZC3H15Q8WU90 426 aaKnown RBP6.56□□□□□ -1.36
SMG1-212ENST00000566328 ZBTB3Q9H5J0 574 aa6.56□□□□□ -1.36
SMG1-212ENST00000566328 ADH1CP00326 375 aa6.55□□□□□ -1.36
SMG1-212ENST00000566328 WDR4P57081 412 aaKnown RBP6.55□□□□□ -1.36
SMG1-212ENST00000566328 PRPF38BQ5VTL8 546 aaKnown RBP6.55□□□□□ -1.36
SMG1-212ENST00000566328 MRPL14Q6P1L8 145 aaKnown RBP6.55□□□□□ -1.36
SMG1-212ENST00000566328 H3BM21 787 aa6.54□□□□□ -1.36
SMG1-212ENST00000566328 SPTLC1O15269 473 aa6.54□□□□□ -1.36
SMG1-212ENST00000566328 TIMP2P16035 220 aa6.53□□□□□ -1.36
SMG1-212ENST00000566328 HRCP23327 699 aa6.53□□□□□ -1.36
SMG1-212ENST00000566328 NR5A1Q13285 461 aa6.53□□□□□ -1.36
SMG1-212ENST00000566328 AGERQ15109 404 aa6.53□□□□□ -1.36
SMG1-212ENST00000566328 RIC3Q7Z5B4 369 aa6.53□□□□□ -1.36
SMG1-212ENST00000566328 CDK15Q96Q40 435 aa6.53□□□□□ -1.36
SMG1-212ENST00000566328 CFAP99D6REC4 459 aa6.52□□□□□ -1.37
SMG1-212ENST00000566328 ARID5BQ14865 1188 aa6.52□□□□□ -1.37
SMG1-212ENST00000566328 BPHLQ86WA6 291 aaPredicted RBP6.52□□□□□ -1.37
SMG1-212ENST00000566328 PARP9Q8IXQ6 854 aa6.52□□□□□ -1.37
SMG1-212ENST00000566328 ARMC2Q8NEN0 867 aa6.52□□□□□ -1.37
SMG1-212ENST00000566328 AK7Q96M32 723 aa6.52□□□□□ -1.37
SMG1-212ENST00000566328 PCDHB15Q9Y5E8 787 aa6.52□□□□□ -1.37
SMG1-212ENST00000566328 TRIM66O15016 1216 aa6.51□□□□□ -1.37
SMG1-212ENST00000566328 UPP2O95045 317 aa6.51□□□□□ -1.37
SMG1-212ENST00000566328 F12P00748 615 aaPredicted RBP6.51□□□□□ -1.37
SMG1-212ENST00000566328 VEGFBP49765 207 aa6.51□□□□□ -1.37
SMG1-212ENST00000566328 PURBQ96QR8 312 aaKnown RBP6.51□□□□□ -1.37
SMG1-212ENST00000566328 NUTM2BA6NNL0 878 aaPredicted RBP6.5□□□□□ -1.37
SMG1-212ENST00000566328 NUTM2EB1AL46 878 aaPredicted RBP6.5□□□□□ -1.37
SMG1-212ENST00000566328 ZIC2O95409 532 aaPredicted RBP6.5□□□□□ -1.37
SMG1-212ENST00000566328 NUTM2DQ5VT03 806 aaPredicted RBP6.5□□□□□ -1.37
SMG1-212ENST00000566328 NUTM2AQ8IVF1 878 aaPredicted RBP6.5□□□□□ -1.37
SMG1-212ENST00000566328 FOXJ1Q92949 421 aa6.5□□□□□ -1.37
SMG1-212ENST00000566328 KLF16Q9BXK1 252 aaPredicted RBP6.5□□□□□ -1.37
SMG1-212ENST00000566328 MAP10Q9P2G4 905 aa6.5□□□□□ -1.37
SMG1-212ENST00000566328 ERBB4Q15303 1308 aa6.5□□□□□ -1.37
SMG1-212ENST00000566328 MAN1A2O60476 641 aa6.49□□□□□ -1.37
SMG1-212ENST00000566328 TSC1Q92574 1164 aa6.49□□□□□ -1.37
SMG1-212ENST00000566328 CSPP1Q1MSJ5 1256 aa6.48□□□□□ -1.37
SMG1-212ENST00000566328 TUSC1Q2TAM9 212 aa6.48□□□□□ -1.37
SMG1-212ENST00000566328 NBPF14Q5TI25 921 aa6.48□□□□□ -1.37
SMG1-212ENST00000566328 HELBQ8NG08 1087 aaPredicted RBP6.48□□□□□ -1.37
SMG1-212ENST00000566328 SUZ12Q15022 739 aaKnown RBP6.47□□□□□ -1.37
SMG1-212ENST00000566328 CABLES1Q8TDN4 633 aa6.47□□□□□ -1.37
SMG1-212ENST00000566328 ITPKCQ96DU7 683 aa6.47□□□□□ -1.37
SMG1-212ENST00000566328 PER1O15534 1290 aaPredicted RBP6.46□□□□□ -1.38
SMG1-212ENST00000566328 VSIG8P0DPA2 414 aa6.46□□□□□ -1.38
SMG1-212ENST00000566328 BMP2P12643 396 aa6.46□□□□□ -1.38
SMG1-212ENST00000566328 GRM5P41594 1212 aa6.46□□□□□ -1.38
SMG1-212ENST00000566328 C6orf118Q5T5N4 469 aa6.46□□□□□ -1.38
SMG1-212ENST00000566328 ZFAND3Q9H8U3 227 aa6.46□□□□□ -1.38
SMG1-212ENST00000566328 LILRB3O75022 631 aa6.45□□□□□ -1.38
SMG1-212ENST00000566328 MYSM1Q5VVJ2 828 aa6.45□□□□□ -1.38
SMG1-212ENST00000566328 MAP4K5Q9Y4K4 846 aa6.45□□□□□ -1.38
SMG1-212ENST00000566328 NR3C2P08235 984 aa6.44□□□□□ -1.38
SMG1-212ENST00000566328 PDE4DQ08499 809 aa6.44□□□□□ -1.38
SMG1-212ENST00000566328 C4orf48Q5BLP8 95 aa6.44□□□□□ -1.38
SMG1-212ENST00000566328 VASH1Q7L8A9 365 aaPredicted RBP6.44□□□□□ -1.38
SMG1-212ENST00000566328 LINC00528Q8N1L1 170 aa6.44□□□□□ -1.38
SMG1-212ENST00000566328 GPKOWQ92917 476 aaPredicted RBP eCLIP6.44□□□□□ -1.38
SMG1-212ENST00000566328 TSEN34Q9BSV6 310 aaKnown RBP6.44□□□□□ -1.38
SMG1-212ENST00000566328 RSPH6AQ9H0K4 717 aa6.44□□□□□ -1.38
SMG1-212ENST00000566328 LIMD1Q9UGP4 676 aa6.44□□□□□ -1.38
SMG1-212ENST00000566328 EMILIN1Q9Y6C2 1016 aa6.44□□□□□ -1.38
SMG1-212ENST00000566328 SOBPA7XYQ1 873 aa6.43□□□□□ -1.38
SMG1-212ENST00000566328 QPCTQ16769 361 aa6.43□□□□□ -1.38
SMG1-212ENST00000566328 SH3RF1Q7Z6J0 888 aa6.43□□□□□ -1.38
SMG1-212ENST00000566328 TRMT44Q8IYL2 757 aaKnown RBP6.43□□□□□ -1.38
SMG1-212ENST00000566328 MEIOBQ8N635 442 aa6.43□□□□□ -1.38
SMG1-212ENST00000566328 C1QTNF2Q9BXJ5 285 aa6.43□□□□□ -1.38
SMG1-212ENST00000566328 MAGEB6P1A0A0J9YX57 407 aa6.42□□□□□ -1.38
SMG1-212ENST00000566328 FSHRP23945 695 aa6.42□□□□□ -1.38
SMG1-212ENST00000566328 PPFIA3O75145 1194 aa6.41□□□□□ -1.38
SMG1-212ENST00000566328 SH3BP5LQ7L8J4 393 aa6.41□□□□□ -1.38
SMG1-212ENST00000566328 CCDC116Q8IYX3 515 aa6.41□□□□□ -1.38
SMG1-212ENST00000566328 PGPEP1Q9NXJ5 209 aa6.41□□□□□ -1.38
SMG1-212ENST00000566328 SOS2Q07890 1332 aaPredicted RBP6.41□□□□□ -1.38
SMG1-212ENST00000566328 CLK2P49760 499 aaKnown RBP6.4□□□□□ -1.38
SMG1-212ENST00000566328 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.4□□□□□ -1.38
SMG1-212ENST00000566328 CDV3Q9UKY7 258 aaKnown RBP6.4□□□□□ -1.38
SMG1-212ENST00000566328 RTL5Q5HYW3 569 aaPredicted RBP6.39□□□□□ -1.39
SMG1-212ENST00000566328 CARD14Q9BXL6 1004 aa6.39□□□□□ -1.39
SMG1-212ENST00000566328 DNMT3LQ9UJW3 386 aa6.39□□□□□ -1.39
SMG1-212ENST00000566328 TTLL8A6PVC2 850 aa6.38□□□□□ -1.39
SMG1-212ENST00000566328 GSK3AP49840 483 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms