RNA–Protein interactions for RNA: ENST00000566247.1

TRADD-205, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 450 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-205ENST00000566247 ALS2Q96Q42 1657 aa25.44■■□□□ 1.66
TRADD-205ENST00000566247 TESK2Q96S53 571 aa25.43■■□□□ 1.66
TRADD-205ENST00000566247 TMC1Q8TDI8 760 aa25.41■■□□□ 1.66
TRADD-205ENST00000566247 USP6P35125 1406 aa25.39■■□□□ 1.66
TRADD-205ENST00000566247 TMF1P82094 1093 aa25.39■■□□□ 1.66
TRADD-205ENST00000566247 ABTB2Q8N961 1025 aa25.39■■□□□ 1.66
TRADD-205ENST00000566247 BRD4O60885 1362 aaPredicted RBP25.39■■□□□ 1.65
TRADD-205ENST00000566247 NUTM2GQ5VZR2 741 aa25.38■■□□□ 1.65
TRADD-205ENST00000566247 PUS7Q96PZ0 661 aaKnown RBP25.38■■□□□ 1.65
TRADD-205ENST00000566247 USP21Q9UK80 565 aa25.38■■□□□ 1.65
TRADD-205ENST00000566247 ZNF692Q9BU19 519 aaPredicted RBP25.37■■□□□ 1.65
TRADD-205ENST00000566247 ABCA3Q99758 1704 aa25.37■■□□□ 1.65
TRADD-205ENST00000566247 MARF1Q9Y4F3 1742 aaKnown RBP25.37■■□□□ 1.65
TRADD-205ENST00000566247 FNBP4Q8N3X1 1017 aaPredicted RBP25.35■■□□□ 1.65
TRADD-205ENST00000566247 KTN1Q86UP2 1357 aaKnown RBP25.34■■□□□ 1.65
TRADD-205ENST00000566247 QTRT2Q9H974 415 aaKnown RBP25.34■■□□□ 1.65
TRADD-205ENST00000566247 HDGFL2Q7Z4V5 671 aaPredicted RBP25.33■■□□□ 1.65
TRADD-205ENST00000566247 CPSF1Q10570 1443 aaKnown RBP25.32■■□□□ 1.64
TRADD-205ENST00000566247 RXRBP28702 533 aa25.32■■□□□ 1.64
TRADD-205ENST00000566247 EIF4G2P78344 907 aaKnown RBP eCLIP25.32■■□□□ 1.64
TRADD-205ENST00000566247 CDCA8Q53HL2 280 aa25.32■■□□□ 1.64
TRADD-205ENST00000566247 NLRP13Q86W25 1043 aa25.32■■□□□ 1.64
TRADD-205ENST00000566247 SLC12A5Q9H2X9 1139 aa25.32■■□□□ 1.64
TRADD-205ENST00000566247 TERF2IPQ9NYB0 399 aa25.31■■□□□ 1.64
TRADD-205ENST00000566247 TRPC5Q9UL62 973 aaPredicted RBP25.31■■□□□ 1.64
TRADD-205ENST00000566247 NINLQ9Y2I6 1382 aa25.31■■□□□ 1.64
TRADD-205ENST00000566247 AKAP12Q02952 1782 aa25.3■■□□□ 1.64
TRADD-205ENST00000566247 NLRP6P59044 892 aa25.29■■□□□ 1.64
TRADD-205ENST00000566247 TTC21BQ7Z4L5 1316 aa25.29■■□□□ 1.64
TRADD-205ENST00000566247 CRYBG1Q9Y4K1 1723 aa25.29■■□□□ 1.64
TRADD-205ENST00000566247 SSH2Q76I76 1423 aa25.29■■□□□ 1.64
TRADD-205ENST00000566247 TTC21AQ8NDW8 1320 aa25.28■■□□□ 1.64
TRADD-205ENST00000566247 SLIT2O94813 1529 aa25.27■■□□□ 1.64
TRADD-205ENST00000566247 PHRF1Q9P1Y6 1649 aaKnown RBP25.27■■□□□ 1.64
TRADD-205ENST00000566247 FAM83GA6ND36 823 aa25.27■■□□□ 1.64
TRADD-205ENST00000566247 PRDM11Q9NQV5 511 aa25.27■■□□□ 1.64
TRADD-205ENST00000566247 BCL9LQ86UU0 1499 aa25.27■■□□□ 1.64
TRADD-205ENST00000566247 CD163L1Q9NR16 1453 aa25.27■■□□□ 1.64
TRADD-205ENST00000566247 SOCS7O14512 581 aa25.26■■□□□ 1.63
TRADD-205ENST00000566247 HSPA5P11021 654 aaKnown RBP25.26■■□□□ 1.63
TRADD-205ENST00000566247 RBM6P78332 1123 aaKnown RBP25.26■■□□□ 1.63
TRADD-205ENST00000566247 UNC5CLQ8IV45 518 aa25.26■■□□□ 1.63
TRADD-205ENST00000566247 USP19O94966 1318 aa25.26■■□□□ 1.63
TRADD-205ENST00000566247 ZC3H6P61129 1189 aaKnown RBP25.25■■□□□ 1.63
TRADD-205ENST00000566247 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.25■■□□□ 1.63
TRADD-205ENST00000566247 A0A1W2PP64 1363 aa25.25■■□□□ 1.63
TRADD-205ENST00000566247 ATRNO75882 1429 aa25.25■■□□□ 1.63
TRADD-205ENST00000566247 MON2Q7Z3U7 1717 aa25.24■■□□□ 1.63
TRADD-205ENST00000566247 PLCH1Q4KWH8 1693 aa25.24■■□□□ 1.63
TRADD-205ENST00000566247 NRKQ7Z2Y5 1582 aa25.24■■□□□ 1.63
TRADD-205ENST00000566247 KIAA0232Q92628 1395 aa25.24■■□□□ 1.63
TRADD-205ENST00000566247 PIK3C2AO00443 1686 aa25.23■■□□□ 1.63
TRADD-205ENST00000566247 EDC4Q6P2E9 1401 aaKnown RBP25.22■■□□□ 1.63
TRADD-205ENST00000566247 BTG4Q9NY30 223 aa25.22■■□□□ 1.63
TRADD-205ENST00000566247 COL14A1Q05707 1796 aaKnown RBP25.22■■□□□ 1.63
TRADD-205ENST00000566247 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.21■■□□□ 1.63
TRADD-205ENST00000566247 GCP02774 474 aa25.21■■□□□ 1.63
TRADD-205ENST00000566247 POLR3GLQ9BT43 218 aa25.2■■□□□ 1.62
TRADD-205ENST00000566247 NWD2Q9ULI1 1742 aa25.2■■□□□ 1.62
TRADD-205ENST00000566247 CHRNA2Q15822 529 aa25.19■■□□□ 1.62
TRADD-205ENST00000566247 CCDC9Q9Y3X0 531 aaKnown RBP25.19■■□□□ 1.62
TRADD-205ENST00000566247 CDK12Q9NYV4 1490 aaPredicted RBP25.19■■□□□ 1.62
TRADD-205ENST00000566247 ANKRD36BQ8N2N9 1353 aa25.18■■□□□ 1.62
TRADD-205ENST00000566247 ZBTB7CA1YPR0 619 aa25.18■■□□□ 1.62
TRADD-205ENST00000566247 GJD4Q96KN9 370 aaPredicted RBP25.18■■□□□ 1.62
TRADD-205ENST00000566247 SLIT3O75094 1523 aa25.17■■□□□ 1.62
TRADD-205ENST00000566247 NME9Q86XW9 330 aa25.17■■□□□ 1.62
TRADD-205ENST00000566247 CPDO75976 1380 aa25.17■■□□□ 1.62
TRADD-205ENST00000566247 SOX12O15370 315 aa25.16■■□□□ 1.62
TRADD-205ENST00000566247 VPS72Q15906 364 aa25.16■■□□□ 1.62
TRADD-205ENST00000566247 KCNH5Q8NCM2 988 aa25.16■■□□□ 1.62
TRADD-205ENST00000566247 RGS12O14924 1447 aa25.15■■□□□ 1.62
TRADD-205ENST00000566247 ZRANB1Q9UGI0 708 aa25.14■■□□□ 1.62
TRADD-205ENST00000566247 USP31Q70CQ4 1352 aa25.13■■□□□ 1.61
TRADD-205ENST00000566247 NRAPQ86VF7 1730 aa25.12■■□□□ 1.61
TRADD-205ENST00000566247 STRN4Q9NRL3 753 aa25.12■■□□□ 1.61
TRADD-205ENST00000566247 EVA1CP58658 441 aa25.1■■□□□ 1.61
TRADD-205ENST00000566247 GLI3P10071 1580 aa25.09■■□□□ 1.61
TRADD-205ENST00000566247 MYOM1P52179 1685 aa25.08■■□□□ 1.61
TRADD-205ENST00000566247 AATKQ6ZMQ8 1374 aa25.06■■□□□ 1.6
TRADD-205ENST00000566247 COG3Q96JB2 828 aa25.06■■□□□ 1.6
TRADD-205ENST00000566247 USP54Q70EL1 1684 aa25.06■■□□□ 1.6
TRADD-205ENST00000566247 OVOS2A0A0J9YW53 1432 aa25.05■■□□□ 1.6
TRADD-205ENST00000566247 OVOS2Q6IE36 1432 aa25.05■■□□□ 1.6
TRADD-205ENST00000566247 LMO7Q8WWI1 1683 aa25.05■■□□□ 1.6
TRADD-205ENST00000566247 CAMTA1Q9Y6Y1 1673 aa25.05■■□□□ 1.6
TRADD-205ENST00000566247 A0A0G2JS52 829 aa25.05■■□□□ 1.6
TRADD-205ENST00000566247 MYT1Q01538 1121 aa25.05■■□□□ 1.6
TRADD-205ENST00000566247 ARHGEF25Q86VW2 580 aa25.05■■□□□ 1.6
TRADD-205ENST00000566247 NFAT5O94916 1531 aa25.05■■□□□ 1.6
TRADD-205ENST00000566247 SPATA31A5Q5VU36 1347 aa25.04■■□□□ 1.6
TRADD-205ENST00000566247 SPATA31A7Q8IWB4 1347 aa25.04■■□□□ 1.6
TRADD-205ENST00000566247 NSD3Q9BZ95 1437 aa25.03■■□□□ 1.6
TRADD-205ENST00000566247 FAM98CQ17RN3 349 aaKnown RBP25.01■■□□□ 1.59
TRADD-205ENST00000566247 GGNBP2Q9H3C7 697 aa25.01■■□□□ 1.59
TRADD-205ENST00000566247 COL5A2P05997 1499 aaPredicted RBP25.01■■□□□ 1.59
TRADD-205ENST00000566247 C11orf95C9JLR9 678 aaPredicted RBP25■■□□□ 1.59
TRADD-205ENST00000566247 LARP1Q6PKG0 1096 aaKnown RBP25■■□□□ 1.59
TRADD-205ENST00000566247 SEPT12Q8IYM1 358 aa25■■□□□ 1.59
TRADD-205ENST00000566247 CARD14Q9BXL6 1004 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms