RNA–Protein interactions for RNA: ENST00000566069.5

PALB2-204, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-204ENST00000566069 MTMR2Q13614 643 aa9.02□□□□□ -0.97
PALB2-204ENST00000566069 MRPL14Q6P1L8 145 aaKnown RBP9.02□□□□□ -0.97
PALB2-204ENST00000566069 VSIG10Q8N0Z9 540 aa9.02□□□□□ -0.97
PALB2-204ENST00000566069 SOBPA7XYQ1 873 aa9.01□□□□□ -0.97
PALB2-204ENST00000566069 PCDHB15Q9Y5E8 787 aa9.01□□□□□ -0.97
PALB2-204ENST00000566069 PLEKHG3A1L390 1219 aa9□□□□□ -0.97
PALB2-204ENST00000566069 AMHR2Q16671 573 aa9□□□□□ -0.97
PALB2-204ENST00000566069 LYPD8Q6UX82 237 aa9□□□□□ -0.97
PALB2-204ENST00000566069 BARGINQ6ZT62 677 aa9□□□□□ -0.97
PALB2-204ENST00000566069 PURBQ96QR8 312 aaKnown RBP9□□□□□ -0.97
PALB2-204ENST00000566069 SPDYE5A6NIY4 337 aa8.99□□□□□ -0.97
PALB2-204ENST00000566069 WDR4P57081 412 aaKnown RBP8.99□□□□□ -0.97
PALB2-204ENST00000566069 FAM181BA6NEQ2 426 aa8.98□□□□□ -0.97
PALB2-204ENST00000566069 ZMYND10O75800 440 aa8.98□□□□□ -0.97
PALB2-204ENST00000566069 GIGYF2Q6Y7W6 1299 aaKnown RBP8.98□□□□□ -0.97
PALB2-204ENST00000566069 FOXJ1Q92949 421 aa8.98□□□□□ -0.97
PALB2-204ENST00000566069 CDK15Q96Q40 435 aa8.98□□□□□ -0.97
PALB2-204ENST00000566069 BEGAINQ9BUH8 593 aa8.98□□□□□ -0.97
PALB2-204ENST00000566069 CFAP99D6REC4 459 aa8.97□□□□□ -0.97
PALB2-204ENST00000566069 TTLL12Q14166 644 aaPredicted RBP8.97□□□□□ -0.97
PALB2-204ENST00000566069 ADH1CP00326 375 aa8.96□□□□□ -0.98
PALB2-204ENST00000566069 GJA5P36382 358 aa8.96□□□□□ -0.98
PALB2-204ENST00000566069 C4orf48Q5BLP8 95 aa8.96□□□□□ -0.98
PALB2-204ENST00000566069 RSBN1LQ6PCB5 846 aaPredicted RBP8.96□□□□□ -0.98
PALB2-204ENST00000566069 TBC1D2Q9BYX2 928 aa8.96□□□□□ -0.98
PALB2-204ENST00000566069 F12P00748 615 aaPredicted RBP8.95□□□□□ -0.98
PALB2-204ENST00000566069 VSIG8P0DPA2 414 aa8.95□□□□□ -0.98
PALB2-204ENST00000566069 HRCP23327 699 aa8.95□□□□□ -0.98
PALB2-204ENST00000566069 CTHP32929 405 aa8.95□□□□□ -0.98
PALB2-204ENST00000566069 GRM5P41594 1212 aa8.95□□□□□ -0.98
PALB2-204ENST00000566069 SCARF1Q14162 830 aa8.95□□□□□ -0.98
PALB2-204ENST00000566069 ZFAND3Q9H8U3 227 aa8.95□□□□□ -0.98
PALB2-204ENST00000566069 MAP10Q9P2G4 905 aa8.95□□□□□ -0.98
PALB2-204ENST00000566069 FAM174AQ8TBP5 190 aa8.94□□□□□ -0.98
PALB2-204ENST00000566069 ITPKCQ96DU7 683 aa8.94□□□□□ -0.98
PALB2-204ENST00000566069 SPTLC1O15269 473 aa8.93□□□□□ -0.98
PALB2-204ENST00000566069 NR3C2P08235 984 aa8.93□□□□□ -0.98
PALB2-204ENST00000566069 ZC3H15Q8WU90 426 aaKnown RBP8.93□□□□□ -0.98
PALB2-204ENST00000566069 PER1O15534 1290 aaPredicted RBP8.92□□□□□ -0.98
PALB2-204ENST00000566069 ZIC2O95409 532 aaPredicted RBP8.92□□□□□ -0.98
PALB2-204ENST00000566069 ARID5BQ14865 1188 aa8.92□□□□□ -0.98
PALB2-204ENST00000566069 NR5A1Q13285 461 aa8.9□□□□□ -0.98
PALB2-204ENST00000566069 PARP9Q8IXQ6 854 aa8.9□□□□□ -0.98
PALB2-204ENST00000566069 CABLES1Q8TDN4 633 aa8.9□□□□□ -0.98
PALB2-204ENST00000566069 SLC24A1O60721 1099 aa8.89□□□□□ -0.99
PALB2-204ENST00000566069 C6orf118Q5T5N4 469 aa8.89□□□□□ -0.99
PALB2-204ENST00000566069 LOC100996750A0A140TA64 210 aa8.88□□□□□ -0.99
PALB2-204ENST00000566069 PPFIA3O75145 1194 aa8.88□□□□□ -0.99
PALB2-204ENST00000566069 RIC3Q7Z5B4 369 aa8.88□□□□□ -0.99
PALB2-204ENST00000566069 KRTAP4-6Q9BYQ5 205 aa8.88□□□□□ -0.99
PALB2-204ENST00000566069 ZBTB3Q9H5J0 574 aa8.88□□□□□ -0.99
PALB2-204ENST00000566069 DIXDC1Q155Q3 683 aa8.87□□□□□ -0.99
PALB2-204ENST00000566069 PRPF38BQ5VTL8 546 aaKnown RBP8.87□□□□□ -0.99
PALB2-204ENST00000566069 TRIM66O15016 1216 aa8.86□□□□□ -0.99
PALB2-204ENST00000566069 MAN1A2O60476 641 aa8.86□□□□□ -0.99
PALB2-204ENST00000566069 GSK3AP49840 483 aa8.86□□□□□ -0.99
PALB2-204ENST00000566069 SOS2Q07890 1332 aaPredicted RBP8.85□□□□□ -0.99
PALB2-204ENST00000566069 SH3RF1Q7Z6J0 888 aa8.85□□□□□ -0.99
PALB2-204ENST00000566069 MEIOBQ8N635 442 aa8.85□□□□□ -0.99
PALB2-204ENST00000566069 C1QTNF2Q9BXJ5 285 aa8.85□□□□□ -0.99
PALB2-204ENST00000566069 DNMT3LQ9UJW3 386 aa8.85□□□□□ -0.99
PALB2-204ENST00000566069 QPCTQ16769 361 aa8.84□□□□□ -0.99
PALB2-204ENST00000566069 CSPP1Q1MSJ5 1256 aa8.84□□□□□ -0.99
PALB2-204ENST00000566069 BPHLQ86WA6 291 aaPredicted RBP8.84□□□□□ -0.99
PALB2-204ENST00000566069 GPR161Q8N6U8 529 aaKnown RBP8.84□□□□□ -0.99
PALB2-204ENST00000566069 LIMD1Q9UGP4 676 aa8.84□□□□□ -0.99
PALB2-204ENST00000566069 BMP2P12643 396 aa8.83□□□□□ -1
PALB2-204ENST00000566069 AGERQ15109 404 aa8.83□□□□□ -1
PALB2-204ENST00000566069 LINC00528Q8N1L1 170 aa8.83□□□□□ -1
PALB2-204ENST00000566069 KRT76Q01546 638 aa8.82□□□□□ -1
PALB2-204ENST00000566069 LILRB3O75022 631 aa8.81□□□□□ -1
PALB2-204ENST00000566069 KCNMA1Q12791 1236 aa8.81□□□□□ -1
PALB2-204ENST00000566069 MYSM1Q5VVJ2 828 aa8.81□□□□□ -1
PALB2-204ENST00000566069 SH3BP5LQ7L8J4 393 aa8.81□□□□□ -1
PALB2-204ENST00000566069 TUSC1Q2TAM9 212 aa8.79□□□□□ -1
PALB2-204ENST00000566069 RTL5Q5HYW3 569 aaPredicted RBP8.79□□□□□ -1
PALB2-204ENST00000566069 TRMT44Q8IYL2 757 aaKnown RBP8.79□□□□□ -1
PALB2-204ENST00000566069 TSC1Q92574 1164 aa8.79□□□□□ -1
PALB2-204ENST00000566069 MAP4K5Q9Y4K4 846 aa8.79□□□□□ -1
PALB2-204ENST00000566069 FSHRP23945 695 aa8.78□□□□□ -1
PALB2-204ENST00000566069 NUTM2BA6NNL0 878 aaPredicted RBP8.77□□□□□ -1.01
PALB2-204ENST00000566069 NUTM2EB1AL46 878 aaPredicted RBP8.77□□□□□ -1.01
PALB2-204ENST00000566069 UPP2O95045 317 aa8.77□□□□□ -1.01
PALB2-204ENST00000566069 NUTM2DQ5VT03 806 aaPredicted RBP8.77□□□□□ -1.01
PALB2-204ENST00000566069 VASH1Q7L8A9 365 aaPredicted RBP8.77□□□□□ -1.01
PALB2-204ENST00000566069 NUTM2AQ8IVF1 878 aaPredicted RBP8.77□□□□□ -1.01
PALB2-204ENST00000566069 AK7Q96M32 723 aa8.77□□□□□ -1.01
PALB2-204ENST00000566069 TSEN34Q9BSV6 310 aaKnown RBP8.77□□□□□ -1.01
PALB2-204ENST00000566069 SUZ12Q15022 739 aaKnown RBP8.76□□□□□ -1.01
PALB2-204ENST00000566069 ARMC2Q8NEN0 867 aa8.76□□□□□ -1.01
PALB2-204ENST00000566069 PTSQ03393 145 aa8.75□□□□□ -1.01
PALB2-204ENST00000566069 CBLBQ13191 982 aa8.75□□□□□ -1.01
PALB2-204ENST00000566069 CCDC116Q8IYX3 515 aa8.75□□□□□ -1.01
PALB2-204ENST00000566069 KCTD17Q8N5Z5 321 aa8.75□□□□□ -1.01
PALB2-204ENST00000566069 CNTNAP3BQ96NU0 1288 aa8.75□□□□□ -1.01
PALB2-204ENST00000566069 CNTNAP3Q9BZ76 1288 aa8.75□□□□□ -1.01
PALB2-204ENST00000566069 EMILIN1Q9Y6C2 1016 aa8.75□□□□□ -1.01
PALB2-204ENST00000566069 MAGEB6P1A0A0J9YX57 407 aa8.74□□□□□ -1.01
PALB2-204ENST00000566069 FIGNL2A6NMB9 653 aa8.74□□□□□ -1.01
PALB2-204ENST00000566069 TTLL8A6PVC2 850 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms