RNA–Protein interactions for RNA: ENST00000565958.1

CCNDBP1-207, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-207ENST00000565958 ARID3CA6NKF2 412 aa9.31□□□□□ -0.92
CCNDBP1-207ENST00000565958 APBB1O00213 710 aa9.31□□□□□ -0.92
CCNDBP1-207ENST00000565958 VEGFBP49765 207 aa9.31□□□□□ -0.92
CCNDBP1-207ENST00000565958 WASF2Q9Y6W5 498 aa9.31□□□□□ -0.92
CCNDBP1-207ENST00000565958 ERBB4Q15303 1308 aa9.31□□□□□ -0.92
CCNDBP1-207ENST00000565958 SIAH2O43255 324 aa9.3□□□□□ -0.92
CCNDBP1-207ENST00000565958 SUZ12Q15022 739 aaKnown RBP9.3□□□□□ -0.92
CCNDBP1-207ENST00000565958 GPCPD1Q9NPB8 672 aa9.3□□□□□ -0.92
CCNDBP1-207ENST00000565958 A6NJR5 290 aa9.29□□□□□ -0.92
CCNDBP1-207ENST00000565958 KDM4AO75164 1064 aa9.29□□□□□ -0.92
CCNDBP1-207ENST00000565958 CD46P15529 392 aa9.29□□□□□ -0.92
CCNDBP1-207ENST00000565958 EHBP1Q8NDI1 1231 aa9.29□□□□□ -0.92
CCNDBP1-207ENST00000565958 USP46P62068 366 aa9.28□□□□□ -0.92
CCNDBP1-207ENST00000565958 MDM2Q00987 491 aaPredicted RBP9.28□□□□□ -0.92
CCNDBP1-207ENST00000565958 MCM6Q14566 821 aa9.27□□□□□ -0.93
CCNDBP1-207ENST00000565958 CLUAP1Q96AJ1 413 aa9.26□□□□□ -0.93
CCNDBP1-207ENST00000565958 JUNDP17535 347 aa9.25□□□□□ -0.93
CCNDBP1-207ENST00000565958 ZFP42Q96MM3 310 aa9.25□□□□□ -0.93
CCNDBP1-207ENST00000565958 TRAK2O60296 914 aa9.24□□□□□ -0.93
CCNDBP1-207ENST00000565958 SSTR3P32745 418 aaPredicted RBP9.24□□□□□ -0.93
CCNDBP1-207ENST00000565958 SKIV2LQ15477 1246 aaKnown RBP9.24□□□□□ -0.93
CCNDBP1-207ENST00000565958 BEGAINQ9BUH8 593 aa9.23□□□□□ -0.93
CCNDBP1-207ENST00000565958 KCNMA1Q12791 1236 aa9.22□□□□□ -0.93
CCNDBP1-207ENST00000565958 NUDT12Q9BQG2 462 aa9.22□□□□□ -0.93
CCNDBP1-207ENST00000565958 VSIG8P0DPA2 414 aa9.21□□□□□ -0.94
CCNDBP1-207ENST00000565958 TRIM26Q12899 539 aaPredicted RBP9.21□□□□□ -0.94
CCNDBP1-207ENST00000565958 PTCRAQ6ISU1 281 aaPredicted RBP9.21□□□□□ -0.94
CCNDBP1-207ENST00000565958 HLA-CQ95604 372 aa9.21□□□□□ -0.94
CCNDBP1-207ENST00000565958 FAM217BQ9NTX9 383 aaPredicted RBP9.21□□□□□ -0.94
CCNDBP1-207ENST00000565958 HOXA2O43364 376 aa9.2□□□□□ -0.94
CCNDBP1-207ENST00000565958 SCARF1Q14162 830 aa9.2□□□□□ -0.94
CCNDBP1-207ENST00000565958 CCDC82Q8N4S0 544 aa9.2□□□□□ -0.94
CCNDBP1-207ENST00000565958 ATP1B4Q9UN42 357 aaPredicted RBP9.2□□□□□ -0.94
CCNDBP1-207ENST00000565958 SH3BP2P78314 561 aa9.19□□□□□ -0.94
CCNDBP1-207ENST00000565958 PROSER2Q86WR7 435 aaPredicted RBP9.19□□□□□ -0.94
CCNDBP1-207ENST00000565958 MRPL14Q6P1L8 145 aaKnown RBP9.18□□□□□ -0.94
CCNDBP1-207ENST00000565958 KCTD17Q8N5Z5 321 aa9.18□□□□□ -0.94
CCNDBP1-207ENST00000565958 RETREG3Q86VR2 466 aa9.17□□□□□ -0.94
CCNDBP1-207ENST00000565958 PROCA1Q8NCQ7 364 aaPredicted RBP9.17□□□□□ -0.94
CCNDBP1-207ENST00000565958 RAD21O60216 631 aa9.16□□□□□ -0.94
CCNDBP1-207ENST00000565958 SYMPKQ92797 1274 aaKnown RBP9.16□□□□□ -0.94
CCNDBP1-207ENST00000565958 POLR3EQ9NVU0 708 aa9.16□□□□□ -0.94
CCNDBP1-207ENST00000565958 CLK2P49760 499 aaKnown RBP9.15□□□□□ -0.94
CCNDBP1-207ENST00000565958 MYSM1Q5VVJ2 828 aa9.15□□□□□ -0.94
CCNDBP1-207ENST00000565958 MPNDQ8N594 471 aa9.15□□□□□ -0.94
CCNDBP1-207ENST00000565958 GUCA2AQ02747 115 aa9.14□□□□□ -0.95
CCNDBP1-207ENST00000565958 PURBQ96QR8 312 aaKnown RBP9.14□□□□□ -0.95
CCNDBP1-207ENST00000565958 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.14□□□□□ -0.95
CCNDBP1-207ENST00000565958 SPDYE5A6NIY4 337 aa9.13□□□□□ -0.95
CCNDBP1-207ENST00000565958 CCNYL3P0C7X3 344 aa9.13□□□□□ -0.95
CCNDBP1-207ENST00000565958 PDIA4P13667 645 aaKnown RBP9.13□□□□□ -0.95
CCNDBP1-207ENST00000565958 HRCP23327 699 aa9.13□□□□□ -0.95
CCNDBP1-207ENST00000565958 GSK3AP49840 483 aa9.13□□□□□ -0.95
CCNDBP1-207ENST00000565958 NNTQ13423 1086 aa9.13□□□□□ -0.95
CCNDBP1-207ENST00000565958 TMEM151AQ8N4L1 468 aa9.13□□□□□ -0.95
CCNDBP1-207ENST00000565958 POM121Q96HA1 1249 aa9.13□□□□□ -0.95
CCNDBP1-207ENST00000565958 VARSP26640 1264 aaKnown RBP9.12□□□□□ -0.95
CCNDBP1-207ENST00000565958 DIXDC1Q155Q3 683 aa9.12□□□□□ -0.95
CCNDBP1-207ENST00000565958 TLL2Q9Y6L7 1015 aa9.12□□□□□ -0.95
CCNDBP1-207ENST00000565958 SOBPA7XYQ1 873 aa9.11□□□□□ -0.95
CCNDBP1-207ENST00000565958 ADH1CP00326 375 aa9.11□□□□□ -0.95
CCNDBP1-207ENST00000565958 TIMP2P16035 220 aa9.11□□□□□ -0.95
CCNDBP1-207ENST00000565958 FNBP4Q8N3X1 1017 aaPredicted RBP9.11□□□□□ -0.95
CCNDBP1-207ENST00000565958 TBC1D2Q9BYX2 928 aa9.11□□□□□ -0.95
CCNDBP1-207ENST00000565958 ZNF777Q9ULD5 760 aaPredicted RBP9.11□□□□□ -0.95
CCNDBP1-207ENST00000565958 WDR4P57081 412 aaKnown RBP9.1□□□□□ -0.95
CCNDBP1-207ENST00000565958 BANK1Q8NDB2 785 aa9.1□□□□□ -0.95
CCNDBP1-207ENST00000565958 BAP1Q92560 729 aa9.1□□□□□ -0.95
CCNDBP1-207ENST00000565958 UNC93B1Q9H1C4 597 aa9.1□□□□□ -0.95
CCNDBP1-207ENST00000565958 EVA1BQ9NVM1 165 aa9.1□□□□□ -0.95
CCNDBP1-207ENST00000565958 MAN1A2O60476 641 aa9.09□□□□□ -0.95
CCNDBP1-207ENST00000565958 GDF11O95390 407 aa9.09□□□□□ -0.95
CCNDBP1-207ENST00000565958 PTPRNQ16849 979 aa9.09□□□□□ -0.95
CCNDBP1-207ENST00000565958 LINC01559Q495D7 138 aa9.09□□□□□ -0.95
CCNDBP1-207ENST00000565958 NUTM1Q86Y26 1132 aa9.09□□□□□ -0.95
CCNDBP1-207ENST00000565958 CCDC97Q96F63 343 aaPredicted RBP9.09□□□□□ -0.95
CCNDBP1-207ENST00000565958 SERPINA10Q9UK55 444 aa9.09□□□□□ -0.95
CCNDBP1-207ENST00000565958 RNF225M0QZC1 329 aaPredicted RBP9.08□□□□□ -0.96
CCNDBP1-207ENST00000565958 RFC5P40937 340 aa9.08□□□□□ -0.96
CCNDBP1-207ENST00000565958 RASSF7Q02833 373 aa9.08□□□□□ -0.96
CCNDBP1-207ENST00000565958 COG6Q9Y2V7 657 aa9.08□□□□□ -0.96
CCNDBP1-207ENST00000565958 C6orf229H3BNL8 230 aa9.07□□□□□ -0.96
CCNDBP1-207ENST00000565958 RANGAP1P46060 587 aaPredicted RBP9.07□□□□□ -0.96
CCNDBP1-207ENST00000565958 ZNF511Q8NB15 262 aa9.07□□□□□ -0.96
CCNDBP1-207ENST00000565958 KLF16Q9BXK1 252 aaPredicted RBP9.07□□□□□ -0.96
CCNDBP1-207ENST00000565958 ZBTB7CA1YPR0 619 aa9.06□□□□□ -0.96
CCNDBP1-207ENST00000565958 PPFIA3O75145 1194 aa9.06□□□□□ -0.96
CCNDBP1-207ENST00000565958 FDX1P10109 184 aa9.06□□□□□ -0.96
CCNDBP1-207ENST00000565958 KCNH2Q12809 1159 aa9.06□□□□□ -0.96
CCNDBP1-207ENST00000565958 TMEM259Q4ZIN3 620 aa9.06□□□□□ -0.96
CCNDBP1-207ENST00000565958 SNRKQ9NRH2 765 aa9.05□□□□□ -0.96
CCNDBP1-207ENST00000565958 LIMD1Q9UGP4 676 aa9.05□□□□□ -0.96
CCNDBP1-207ENST00000565958 PPP2R2DQ66LE6 453 aa9.04□□□□□ -0.96
CCNDBP1-207ENST00000565958 FAM174AQ8TBP5 190 aa9.04□□□□□ -0.96
CCNDBP1-207ENST00000565958 PCDHGC3Q9UN70 934 aa9.04□□□□□ -0.96
CCNDBP1-207ENST00000565958 RIC3Q7Z5B4 369 aa9.03□□□□□ -0.96
CCNDBP1-207ENST00000565958 SPIRE2Q8WWL2 714 aa9.03□□□□□ -0.96
CCNDBP1-207ENST00000565958 ADAMTS8Q9UP79 889 aa9.03□□□□□ -0.96
CCNDBP1-207ENST00000565958 TUSC1Q2TAM9 212 aa9.02□□□□□ -0.97
CCNDBP1-207ENST00000565958 C6orf118Q5T5N4 469 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms