RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 LRRC59Q96AG4 307 aaKnown RBP10.6□□□□□ -0.71
CDH1-208ENST00000565810 COG3Q96JB2 828 aa10.6□□□□□ -0.71
CDH1-208ENST00000565810 XIRP1Q702N8 1843 aaKnown RBP10.6□□□□□ -0.71
CDH1-208ENST00000565810 SOS2Q07890 1332 aaPredicted RBP10.59□□□□□ -0.71
CDH1-208ENST00000565810 FYB1O15117 783 aa10.59□□□□□ -0.71
CDH1-208ENST00000565810 NLRP6P59044 892 aa10.59□□□□□ -0.71
CDH1-208ENST00000565810 AMER1Q5JTC6 1135 aaPredicted RBP10.59□□□□□ -0.71
CDH1-208ENST00000565810 MORC1Q86VD1 984 aa10.59□□□□□ -0.71
CDH1-208ENST00000565810 NLRP13Q86W25 1043 aa10.59□□□□□ -0.71
CDH1-208ENST00000565810 GGNBP2Q9H3C7 697 aa10.59□□□□□ -0.71
CDH1-208ENST00000565810 SBNO1A3KN83 1393 aa10.59□□□□□ -0.71
CDH1-208ENST00000565810 NSD2O96028 1365 aa10.58□□□□□ -0.72
CDH1-208ENST00000565810 NPC1L1Q9UHC9 1359 aa10.58□□□□□ -0.72
CDH1-208ENST00000565810 NME9Q86XW9 330 aa10.58□□□□□ -0.72
CDH1-208ENST00000565810 ITSN1Q15811 1721 aa10.58□□□□□ -0.72
CDH1-208ENST00000565810 SSH2Q76I76 1423 aa10.58□□□□□ -0.72
CDH1-208ENST00000565810 SPATA31A3Q5VYP0 1347 aa10.58□□□□□ -0.72
CDH1-208ENST00000565810 RALBP1Q15311 655 aa10.57□□□□□ -0.72
CDH1-208ENST00000565810 NUTM2GQ5VZR2 741 aa10.57□□□□□ -0.72
CDH1-208ENST00000565810 KIF1AQ12756 1690 aa10.57□□□□□ -0.72
CDH1-208ENST00000565810 TOPAZ1Q8N9V7 1692 aa10.57□□□□□ -0.72
CDH1-208ENST00000565810 ARHGEF10O15013 1369 aa10.56□□□□□ -0.72
CDH1-208ENST00000565810 HAP1P54257 671 aaPredicted RBP10.55□□□□□ -0.72
CDH1-208ENST00000565810 KCNH5Q8NCM2 988 aa10.55□□□□□ -0.72
CDH1-208ENST00000565810 TNS3Q68CZ2 1445 aa10.55□□□□□ -0.72
CDH1-208ENST00000565810 USP31Q70CQ4 1352 aa10.54□□□□□ -0.72
CDH1-208ENST00000565810 MYOM1P52179 1685 aa10.54□□□□□ -0.72
CDH1-208ENST00000565810 PLEKHG5O94827 1062 aa10.54□□□□□ -0.72
CDH1-208ENST00000565810 TNNT2P45379 298 aaPredicted RBP10.54□□□□□ -0.72
CDH1-208ENST00000565810 FBXO41Q8TF61 875 aa10.54□□□□□ -0.72
CDH1-208ENST00000565810 PRKRIP1Q9H875 184 aaPredicted RBP10.54□□□□□ -0.72
CDH1-208ENST00000565810 ZRANB1Q9UGI0 708 aa10.54□□□□□ -0.72
CDH1-208ENST00000565810 PXDNQ92626 1479 aa10.54□□□□□ -0.72
CDH1-208ENST00000565810 SOX12O15370 315 aa10.53□□□□□ -0.72
CDH1-208ENST00000565810 HSPA1LP34931 641 aa10.53□□□□□ -0.72
CDH1-208ENST00000565810 ROBO1Q9Y6N7 1651 aa10.53□□□□□ -0.72
CDH1-208ENST00000565810 RGPD8O14715 1765 aaPredicted RBP10.52□□□□□ -0.72
CDH1-208ENST00000565810 AHDC1Q5TGY3 1603 aaPredicted RBP10.52□□□□□ -0.73
CDH1-208ENST00000565810 GCP02774 474 aa10.52□□□□□ -0.73
CDH1-208ENST00000565810 PARD3Q8TEW0 1356 aa10.51□□□□□ -0.73
CDH1-208ENST00000565810 JCADQ9P266 1359 aa10.51□□□□□ -0.73
CDH1-208ENST00000565810 PPP2R1AP30153 589 aa10.5□□□□□ -0.73
CDH1-208ENST00000565810 CABLES1Q8TDN4 633 aa10.5□□□□□ -0.73
CDH1-208ENST00000565810 USP19O94966 1318 aa10.5□□□□□ -0.73
CDH1-208ENST00000565810 MYBBP1AQ9BQG0 1328 aaKnown RBP10.5□□□□□ -0.73
CDH1-208ENST00000565810 OVOS2A0A0J9YW53 1432 aa10.5□□□□□ -0.73
CDH1-208ENST00000565810 OVOS2Q6IE36 1432 aa10.5□□□□□ -0.73
CDH1-208ENST00000565810 AKAP12Q02952 1782 aa10.49□□□□□ -0.73
CDH1-208ENST00000565810 ZBTB7CA1YPR0 619 aa10.49□□□□□ -0.73
CDH1-208ENST00000565810 PPM1GO15355 546 aaPredicted RBP10.49□□□□□ -0.73
CDH1-208ENST00000565810 AMPHP49418 695 aa10.49□□□□□ -0.73
CDH1-208ENST00000565810 CFAP53Q96M91 514 aa10.49□□□□□ -0.73
CDH1-208ENST00000565810 MON2Q7Z3U7 1717 aa10.49□□□□□ -0.73
CDH1-208ENST00000565810 AATKQ6ZMQ8 1374 aa10.49□□□□□ -0.73
CDH1-208ENST00000565810 PNPLA6Q8IY17 1366 aa10.49□□□□□ -0.73
CDH1-208ENST00000565810 NHSL1Q5SYE7 1610 aa10.48□□□□□ -0.73
CDH1-208ENST00000565810 MTHFSP49914 203 aa10.48□□□□□ -0.73
CDH1-208ENST00000565810 ZC3H6P61129 1189 aaKnown RBP10.48□□□□□ -0.73
CDH1-208ENST00000565810 RRS1Q15050 365 aaKnown RBP10.48□□□□□ -0.73
CDH1-208ENST00000565810 NUTM2BA6NNL0 878 aaPredicted RBP10.47□□□□□ -0.73
CDH1-208ENST00000565810 NUTM2EB1AL46 878 aaPredicted RBP10.47□□□□□ -0.73
CDH1-208ENST00000565810 FBLN1P23142 703 aa10.47□□□□□ -0.73
CDH1-208ENST00000565810 ARHGEF25Q86VW2 580 aa10.47□□□□□ -0.73
CDH1-208ENST00000565810 NUTM2AQ8IVF1 878 aaPredicted RBP10.47□□□□□ -0.73
CDH1-208ENST00000565810 MIER1Q8N108 512 aa10.47□□□□□ -0.73
CDH1-208ENST00000565810 POLKQ9UBT6 870 aa10.47□□□□□ -0.73
CDH1-208ENST00000565810 SPATA31A6Q5VVP1 1343 aa10.47□□□□□ -0.73
CDH1-208ENST00000565810 CCER2I3L3R5 266 aa10.46□□□□□ -0.73
CDH1-208ENST00000565810 PRDM11Q9NQV5 511 aa10.46□□□□□ -0.73
CDH1-208ENST00000565810 EMILIN1Q9Y6C2 1016 aa10.46□□□□□ -0.73
CDH1-208ENST00000565810 MAP3K19Q56UN5 1328 aa10.46□□□□□ -0.73
CDH1-208ENST00000565810 NRKQ7Z2Y5 1582 aa10.46□□□□□ -0.74
CDH1-208ENST00000565810 PHLPP1O60346 1717 aa10.45□□□□□ -0.74
CDH1-208ENST00000565810 TRPM3Q9HCF6 1732 aaPredicted RBP10.45□□□□□ -0.74
CDH1-208ENST00000565810 KIF24Q5T7B8 1368 aa10.45□□□□□ -0.74
CDH1-208ENST00000565810 ADAMTS2O95450 1211 aa10.45□□□□□ -0.74
CDH1-208ENST00000565810 IP6K1Q92551 441 aa10.45□□□□□ -0.74
CDH1-208ENST00000565810 COL16A1Q07092 1604 aaPredicted RBP10.44□□□□□ -0.74
CDH1-208ENST00000565810 KIAA0232Q92628 1395 aa10.44□□□□□ -0.74
CDH1-208ENST00000565810 MEX3CQ5U5Q3 659 aaKnown RBP10.44□□□□□ -0.74
CDH1-208ENST00000565810 MRS2Q9HD23 443 aa10.44□□□□□ -0.74
CDH1-208ENST00000565810 NUDCQ9Y266 331 aa10.44□□□□□ -0.74
CDH1-208ENST00000565810 PIK3C2AO00443 1686 aa10.44□□□□□ -0.74
CDH1-208ENST00000565810 CPDO75976 1380 aa10.43□□□□□ -0.74
CDH1-208ENST00000565810 FLT4P35916 1363 aa10.43□□□□□ -0.74
CDH1-208ENST00000565810 DIAPH1O60610 1272 aaKnown RBP10.43□□□□□ -0.74
CDH1-208ENST00000565810 HOXC9P31274 260 aa10.43□□□□□ -0.74
CDH1-208ENST00000565810 CHRNA2Q15822 529 aa10.43□□□□□ -0.74
CDH1-208ENST00000565810 HSP90AB2PQ58FF8 381 aa10.43□□□□□ -0.74
CDH1-208ENST00000565810 SLIT3O75094 1523 aa10.43□□□□□ -0.74
CDH1-208ENST00000565810 RTL1A6NKG5 1358 aa10.42□□□□□ -0.74
CDH1-208ENST00000565810 ALS2Q96Q42 1657 aa10.42□□□□□ -0.74
CDH1-208ENST00000565810 FAM83GA6ND36 823 aa10.42□□□□□ -0.74
CDH1-208ENST00000565810 EVA1CP58658 441 aa10.42□□□□□ -0.74
CDH1-208ENST00000565810 MED1Q15648 1581 aaPredicted RBP10.41□□□□□ -0.74
CDH1-208ENST00000565810 CSB-PGBD3P0DP91 1061 aa10.41□□□□□ -0.74
CDH1-208ENST00000565810 WDR43Q15061 677 aaKnown RBP eCLIP10.41□□□□□ -0.74
CDH1-208ENST00000565810 LTV1Q96GA3 475 aaPredicted RBP10.41□□□□□ -0.74
CDH1-208ENST00000565810 NGLY1Q96IV0 654 aa10.41□□□□□ -0.74
CDH1-208ENST00000565810 KIF20BQ96Q89 1820 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms