RNA–Protein interactions for RNA: ENST00000565704.5

GDPD3-203, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

TSL 2

Gene GDPD3, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-203ENST00000565704 TTC21AQ8NDW8 1320 aa18.62■□□□□ 0.57
GDPD3-203ENST00000565704 USP31Q70CQ4 1352 aa18.61■□□□□ 0.57
GDPD3-203ENST00000565704 CCER2I3L3R5 266 aa18.6■□□□□ 0.57
GDPD3-203ENST00000565704 NME9Q86XW9 330 aa18.59■□□□□ 0.57
GDPD3-203ENST00000565704 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.59■□□□□ 0.57
GDPD3-203ENST00000565704 PSME1Q06323 249 aa18.58■□□□□ 0.56
GDPD3-203ENST00000565704 KRT28Q7Z3Y7 464 aa18.58■□□□□ 0.56
GDPD3-203ENST00000565704 GGNBP2Q9H3C7 697 aa18.58■□□□□ 0.56
GDPD3-203ENST00000565704 ZRANB1Q9UGI0 708 aa18.58■□□□□ 0.56
GDPD3-203ENST00000565704 SOS2Q07890 1332 aaPredicted RBP18.57■□□□□ 0.56
GDPD3-203ENST00000565704 SCAF1Q9H7N4 1312 aaKnown RBP18.57■□□□□ 0.56
GDPD3-203ENST00000565704 CERKQ8TCT0 537 aa18.57■□□□□ 0.56
GDPD3-203ENST00000565704 PXDNQ92626 1479 aa18.57■□□□□ 0.56
GDPD3-203ENST00000565704 TRPM3Q9HCF6 1732 aaPredicted RBP18.57■□□□□ 0.56
GDPD3-203ENST00000565704 OVOS2A0A0J9YW53 1432 aa18.57■□□□□ 0.56
GDPD3-203ENST00000565704 OVOS2Q6IE36 1432 aa18.57■□□□□ 0.56
GDPD3-203ENST00000565704 SBNO1A3KN83 1393 aa18.56■□□□□ 0.56
GDPD3-203ENST00000565704 NPHP3Q7Z494 1330 aa18.56■□□□□ 0.56
GDPD3-203ENST00000565704 MYBBP1AQ9BQG0 1328 aaKnown RBP18.56■□□□□ 0.56
GDPD3-203ENST00000565704 PPP2R1AP30153 589 aa18.56■□□□□ 0.56
GDPD3-203ENST00000565704 USP54Q70EL1 1684 aa18.55■□□□□ 0.56
GDPD3-203ENST00000565704 CCDC184Q52MB2 194 aa18.55■□□□□ 0.56
GDPD3-203ENST00000565704 MORC1Q86VD1 984 aa18.55■□□□□ 0.56
GDPD3-203ENST00000565704 DDX17Q92841 729 aaKnown RBP18.55■□□□□ 0.56
GDPD3-203ENST00000565704 ANKRD26Q9UPS8 1709 aa18.54■□□□□ 0.56
GDPD3-203ENST00000565704 KIF20BQ96Q89 1820 aa18.54■□□□□ 0.56
GDPD3-203ENST00000565704 PIK3C2AO00443 1686 aa18.54■□□□□ 0.56
GDPD3-203ENST00000565704 AATKQ6ZMQ8 1374 aa18.53■□□□□ 0.56
GDPD3-203ENST00000565704 TOM1O60784 492 aa18.52■□□□□ 0.56
GDPD3-203ENST00000565704 NLRP13Q86W25 1043 aa18.52■□□□□ 0.56
GDPD3-203ENST00000565704 MARF1Q9Y4F3 1742 aaKnown RBP18.52■□□□□ 0.55
GDPD3-203ENST00000565704 XPCQ01831 940 aaPredicted RBP18.51■□□□□ 0.55
GDPD3-203ENST00000565704 CNGB1Q14028 1251 aaPredicted RBP18.51■□□□□ 0.55
GDPD3-203ENST00000565704 NHSL1Q5SYE7 1610 aa18.51■□□□□ 0.55
GDPD3-203ENST00000565704 ALS2Q96Q42 1657 aa18.5■□□□□ 0.55
GDPD3-203ENST00000565704 SPATA31A3Q5VYP0 1347 aa18.5■□□□□ 0.55
GDPD3-203ENST00000565704 ABTB2Q8N961 1025 aa18.5■□□□□ 0.55
GDPD3-203ENST00000565704 COG3Q96JB2 828 aa18.5■□□□□ 0.55
GDPD3-203ENST00000565704 AHDC1Q5TGY3 1603 aaPredicted RBP18.49■□□□□ 0.55
GDPD3-203ENST00000565704 ROBO1Q9Y6N7 1651 aa18.48■□□□□ 0.55
GDPD3-203ENST00000565704 INSRP06213 1382 aa18.48■□□□□ 0.55
GDPD3-203ENST00000565704 NLRP6P59044 892 aa18.48■□□□□ 0.55
GDPD3-203ENST00000565704 USP19O94966 1318 aa18.48■□□□□ 0.55
GDPD3-203ENST00000565704 PNPLA6Q8IY17 1366 aa18.47■□□□□ 0.55
GDPD3-203ENST00000565704 PAK3O75914 559 aaPredicted RBP18.47■□□□□ 0.55
GDPD3-203ENST00000565704 FBLN1P23142 703 aa18.47■□□□□ 0.55
GDPD3-203ENST00000565704 POLKQ9UBT6 870 aa18.47■□□□□ 0.55
GDPD3-203ENST00000565704 TNS3Q68CZ2 1445 aa18.47■□□□□ 0.55
GDPD3-203ENST00000565704 SMG6Q86US8 1419 aaKnown RBP18.46■□□□□ 0.55
GDPD3-203ENST00000565704 UBAP1LF5GYI3 381 aa18.45■□□□□ 0.54
GDPD3-203ENST00000565704 MTHFSP49914 203 aa18.45■□□□□ 0.54
GDPD3-203ENST00000565704 PNISRQ8TF01 805 aaKnown RBP18.45■□□□□ 0.54
GDPD3-203ENST00000565704 SLIT3O75094 1523 aa18.44■□□□□ 0.54
GDPD3-203ENST00000565704 TNNT2P45379 298 aaPredicted RBP18.44■□□□□ 0.54
GDPD3-203ENST00000565704 NUTM2GQ5VZR2 741 aa18.43■□□□□ 0.54
GDPD3-203ENST00000565704 ARHGEF10O15013 1369 aa18.42■□□□□ 0.54
GDPD3-203ENST00000565704 MRS2Q9HD23 443 aa18.42■□□□□ 0.54
GDPD3-203ENST00000565704 NFAT5O94916 1531 aa18.42■□□□□ 0.54
GDPD3-203ENST00000565704 MED1Q15648 1581 aaPredicted RBP18.42■□□□□ 0.54
GDPD3-203ENST00000565704 GCP02774 474 aa18.41■□□□□ 0.54
GDPD3-203ENST00000565704 COL3A1P02461 1466 aaPredicted RBP18.4■□□□□ 0.54
GDPD3-203ENST00000565704 EMILIN1Q9Y6C2 1016 aa18.4■□□□□ 0.54
GDPD3-203ENST00000565704 MAP2P11137 1827 aaKnown RBP18.39■□□□□ 0.54
GDPD3-203ENST00000565704 RRS1Q15050 365 aaKnown RBP18.39■□□□□ 0.53
GDPD3-203ENST00000565704 KCNH5Q8NCM2 988 aa18.39■□□□□ 0.53
GDPD3-203ENST00000565704 LRRC59Q96AG4 307 aaKnown RBP18.39■□□□□ 0.53
GDPD3-203ENST00000565704 KIF24Q5T7B8 1368 aa18.39■□□□□ 0.53
GDPD3-203ENST00000565704 CRYBG1Q9Y4K1 1723 aa18.38■□□□□ 0.53
GDPD3-203ENST00000565704 ARHGEF25Q86VW2 580 aa18.38■□□□□ 0.53
GDPD3-203ENST00000565704 MAP3K19Q56UN5 1328 aa18.38■□□□□ 0.53
GDPD3-203ENST00000565704 COL16A1Q07092 1604 aaPredicted RBP18.38■□□□□ 0.53
GDPD3-203ENST00000565704 PIP4K2BP78356 416 aa18.37■□□□□ 0.53
GDPD3-203ENST00000565704 CDK12Q9NYV4 1490 aaPredicted RBP18.36■□□□□ 0.53
GDPD3-203ENST00000565704 PEAK1Q9H792 1746 aa18.35■□□□□ 0.53
GDPD3-203ENST00000565704 LMOD2Q6P5Q4 547 aa18.35■□□□□ 0.53
GDPD3-203ENST00000565704 PHRF1Q9P1Y6 1649 aaKnown RBP18.34■□□□□ 0.53
GDPD3-203ENST00000565704 CPDO75976 1380 aa18.33■□□□□ 0.53
GDPD3-203ENST00000565704 IL13P35225 146 aa18.33■□□□□ 0.52
GDPD3-203ENST00000565704 CABLES1Q8TDN4 633 aa18.33■□□□□ 0.52
GDPD3-203ENST00000565704 IP6K1Q92551 441 aa18.33■□□□□ 0.52
GDPD3-203ENST00000565704 COL22A1Q8NFW1 1626 aaPredicted RBP18.33■□□□□ 0.52
GDPD3-203ENST00000565704 PHLPP1O60346 1717 aa18.32■□□□□ 0.52
GDPD3-203ENST00000565704 CFAP53Q96M91 514 aa18.32■□□□□ 0.52
GDPD3-203ENST00000565704 SHPRHQ149N8 1683 aa18.31■□□□□ 0.52
GDPD3-203ENST00000565704 RTL1A6NKG5 1358 aa18.31■□□□□ 0.52
GDPD3-203ENST00000565704 FLT4P35916 1363 aa18.31■□□□□ 0.52
GDPD3-203ENST00000565704 HOXC9P31274 260 aa18.31■□□□□ 0.52
GDPD3-203ENST00000565704 HSP90AB2PQ58FF8 381 aa18.31■□□□□ 0.52
GDPD3-203ENST00000565704 SOX12O15370 315 aa18.3■□□□□ 0.52
GDPD3-203ENST00000565704 ADAMTS8Q9UP79 889 aa18.3■□□□□ 0.52
GDPD3-203ENST00000565704 DIAPH1O60610 1272 aaKnown RBP18.29■□□□□ 0.52
GDPD3-203ENST00000565704 COL18A1P39060 1754 aa18.29■□□□□ 0.52
GDPD3-203ENST00000565704 PPM1GO15355 546 aaPredicted RBP18.28■□□□□ 0.52
GDPD3-203ENST00000565704 EIF4A2Q14240 407 aaKnown RBP18.28■□□□□ 0.52
GDPD3-203ENST00000565704 ABCA3Q99758 1704 aa18.28■□□□□ 0.52
GDPD3-203ENST00000565704 AMPHP49418 695 aa18.27■□□□□ 0.52
GDPD3-203ENST00000565704 FAM9BQ8IZU0 186 aa18.27■□□□□ 0.52
GDPD3-203ENST00000565704 AXIN2Q9Y2T1 843 aa18.27■□□□□ 0.52
GDPD3-203ENST00000565704 ABCC6O95255 1503 aa18.27■□□□□ 0.51
GDPD3-203ENST00000565704 ZC3H6P61129 1189 aaKnown RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms