RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 SBNO2Q9Y2G9 1366 aa23.86■■□□□ 1.41
USB1-211ENST00000565662 RALGAPBQ86X10 1494 aa23.86■■□□□ 1.41
USB1-211ENST00000565662 UNC5CLQ8IV45 518 aa23.85■■□□□ 1.41
USB1-211ENST00000565662 COL14A1Q05707 1796 aaKnown RBP23.85■■□□□ 1.41
USB1-211ENST00000565662 CRYBG1Q9Y4K1 1723 aa23.83■■□□□ 1.41
USB1-211ENST00000565662 PPIP5K1Q6PFW1 1433 aa23.83■■□□□ 1.4
USB1-211ENST00000565662 SLC24A1O60721 1099 aa23.82■■□□□ 1.4
USB1-211ENST00000565662 ATAD2Q6PL18 1390 aa23.81■■□□□ 1.4
USB1-211ENST00000565662 PAK3O75914 559 aaPredicted RBP23.81■■□□□ 1.4
USB1-211ENST00000565662 ACEP12821 1306 aa23.81■■□□□ 1.4
USB1-211ENST00000565662 CLSPNQ9HAW4 1339 aa23.81■■□□□ 1.4
USB1-211ENST00000565662 GJD4Q96KN9 370 aaPredicted RBP23.8■■□□□ 1.4
USB1-211ENST00000565662 PHRF1Q9P1Y6 1649 aaKnown RBP23.79■■□□□ 1.4
USB1-211ENST00000565662 NBPF8Q3BBV2 869 aa23.78■■□□□ 1.4
USB1-211ENST00000565662 VPS72Q15906 364 aa23.77■■□□□ 1.4
USB1-211ENST00000565662 CARD11Q9BXL7 1154 aa23.77■■□□□ 1.4
USB1-211ENST00000565662 NRAPQ86VF7 1730 aa23.76■■□□□ 1.39
USB1-211ENST00000565662 CABLES1Q8TDN4 633 aa23.75■■□□□ 1.39
USB1-211ENST00000565662 UPF1Q92900 1129 aaKnown RBP eCLIP23.74■■□□□ 1.39
USB1-211ENST00000565662 ZNF692Q9BU19 519 aaPredicted RBP23.73■■□□□ 1.39
USB1-211ENST00000565662 CABP2Q9NPB3 220 aa23.73■■□□□ 1.39
USB1-211ENST00000565662 TIMELESSQ9UNS1 1208 aa23.73■■□□□ 1.39
USB1-211ENST00000565662 USP6P35125 1406 aa23.73■■□□□ 1.39
USB1-211ENST00000565662 GLI3P10071 1580 aa23.73■■□□□ 1.39
USB1-211ENST00000565662 NLRP13Q86W25 1043 aa23.71■■□□□ 1.39
USB1-211ENST00000565662 PRDM11Q9NQV5 511 aa23.71■■□□□ 1.39
USB1-211ENST00000565662 ABTB2Q8N961 1025 aa23.7■■□□□ 1.38
USB1-211ENST00000565662 NRKQ7Z2Y5 1582 aa23.69■■□□□ 1.38
USB1-211ENST00000565662 USP19O94966 1318 aa23.69■■□□□ 1.38
USB1-211ENST00000565662 CCDC125Q86Z20 511 aa23.69■■□□□ 1.38
USB1-211ENST00000565662 PUS7Q96PZ0 661 aaKnown RBP23.69■■□□□ 1.38
USB1-211ENST00000565662 AKAP12Q02952 1782 aa23.69■■□□□ 1.38
USB1-211ENST00000565662 CPDO75976 1380 aa23.68■■□□□ 1.38
USB1-211ENST00000565662 FAM83GA6ND36 823 aa23.67■■□□□ 1.38
USB1-211ENST00000565662 BTG4Q9NY30 223 aa23.67■■□□□ 1.38
USB1-211ENST00000565662 CABP1Q9NZU7 370 aa23.67■■□□□ 1.38
USB1-211ENST00000565662 CCDC9Q9Y3X0 531 aaKnown RBP23.67■■□□□ 1.38
USB1-211ENST00000565662 NINLQ9Y2I6 1382 aa23.65■■□□□ 1.38
USB1-211ENST00000565662 TTC21AQ8NDW8 1320 aa23.65■■□□□ 1.38
USB1-211ENST00000565662 KIAA0232Q92628 1395 aa23.65■■□□□ 1.38
USB1-211ENST00000565662 ONECUT3O60422 494 aaPredicted RBP23.64■■□□□ 1.37
USB1-211ENST00000565662 PLEKHG5O94827 1062 aa23.64■■□□□ 1.37
USB1-211ENST00000565662 MON2Q7Z3U7 1717 aa23.62■■□□□ 1.37
USB1-211ENST00000565662 SSH2Q76I76 1423 aa23.62■■□□□ 1.37
USB1-211ENST00000565662 SLIT3O75094 1523 aa23.62■■□□□ 1.37
USB1-211ENST00000565662 CPSF1Q10570 1443 aaKnown RBP23.61■■□□□ 1.37
USB1-211ENST00000565662 PIK3C2AO00443 1686 aa23.6■■□□□ 1.37
USB1-211ENST00000565662 KCNH5Q8NCM2 988 aa23.59■■□□□ 1.37
USB1-211ENST00000565662 LMO7Q8WWI1 1683 aa23.59■■□□□ 1.37
USB1-211ENST00000565662 ABCC6O95255 1503 aa23.59■■□□□ 1.37
USB1-211ENST00000565662 SPATA31A5Q5VU36 1347 aa23.59■■□□□ 1.37
USB1-211ENST00000565662 SPATA31A7Q8IWB4 1347 aa23.59■■□□□ 1.37
USB1-211ENST00000565662 KTN1Q86UP2 1357 aaKnown RBP23.58■■□□□ 1.37
USB1-211ENST00000565662 GCP02774 474 aa23.58■■□□□ 1.37
USB1-211ENST00000565662 SEPT12Q8IYM1 358 aa23.58■■□□□ 1.37
USB1-211ENST00000565662 BRWD3Q6RI45 1802 aa23.58■■□□□ 1.37
USB1-211ENST00000565662 USP54Q70EL1 1684 aa23.57■■□□□ 1.36
USB1-211ENST00000565662 NLRP6P59044 892 aa23.57■■□□□ 1.36
USB1-211ENST00000565662 HDGFL2Q7Z4V5 671 aaPredicted RBP23.57■■□□□ 1.36
USB1-211ENST00000565662 TERF2IPQ9NYB0 399 aa23.56■■□□□ 1.36
USB1-211ENST00000565662 THSD7AQ9UPZ6 1657 aa23.56■■□□□ 1.36
USB1-211ENST00000565662 BLMP54132 1417 aaPredicted RBP23.56■■□□□ 1.36
USB1-211ENST00000565662 ZC3H6P61129 1189 aaKnown RBP23.55■■□□□ 1.36
USB1-211ENST00000565662 NUTM2GQ5VZR2 741 aa23.55■■□□□ 1.36
USB1-211ENST00000565662 TTC21BQ7Z4L5 1316 aa23.55■■□□□ 1.36
USB1-211ENST00000565662 A0A0G2JS52 829 aa23.54■■□□□ 1.36
USB1-211ENST00000565662 MYT1Q01538 1121 aa23.54■■□□□ 1.36
USB1-211ENST00000565662 KRT27Q7Z3Y8 459 aa23.54■■□□□ 1.36
USB1-211ENST00000565662 EDC4Q6P2E9 1401 aaKnown RBP23.53■■□□□ 1.36
USB1-211ENST00000565662 EVA1CP58658 441 aa23.53■■□□□ 1.36
USB1-211ENST00000565662 SF3B2Q13435 895 aaKnown RBP23.53■■□□□ 1.36
USB1-211ENST00000565662 CDCA8Q53HL2 280 aa23.53■■□□□ 1.36
USB1-211ENST00000565662 THRAP3Q9Y2W1 955 aaKnown RBP23.53■■□□□ 1.36
USB1-211ENST00000565662 AATKQ6ZMQ8 1374 aa23.52■■□□□ 1.36
USB1-211ENST00000565662 SPATA31A1Q5TZJ5 1347 aa23.52■■□□□ 1.36
USB1-211ENST00000565662 FAM98CQ17RN3 349 aaKnown RBP23.51■■□□□ 1.35
USB1-211ENST00000565662 USP47Q96K76 1375 aa23.51■■□□□ 1.35
USB1-211ENST00000565662 CHRNA2Q15822 529 aa23.5■■□□□ 1.35
USB1-211ENST00000565662 COL5A2P05997 1499 aaPredicted RBP23.49■■□□□ 1.35
USB1-211ENST00000565662 CAMTA1Q9Y6Y1 1673 aa23.49■■□□□ 1.35
USB1-211ENST00000565662 C11orf95C9JLR9 678 aaPredicted RBP23.49■■□□□ 1.35
USB1-211ENST00000565662 BARGINQ6ZT62 677 aa23.49■■□□□ 1.35
USB1-211ENST00000565662 USP31Q70CQ4 1352 aa23.49■■□□□ 1.35
USB1-211ENST00000565662 EP400Q96L91 3159 aa23.48■■□□□ 1.35
USB1-211ENST00000565662 ST20-MTHFSA0A0A6YYL1 179 aa23.48■■□□□ 1.35
USB1-211ENST00000565662 TMF1P82094 1093 aa23.48■■□□□ 1.35
USB1-211ENST00000565662 TMC1Q8TDI8 760 aa23.48■■□□□ 1.35
USB1-211ENST00000565662 STRN4Q9NRL3 753 aa23.48■■□□□ 1.35
USB1-211ENST00000565662 TESK2Q96S53 571 aa23.47■■□□□ 1.35
USB1-211ENST00000565662 CRB1P82279 1406 aa23.47■■□□□ 1.35
USB1-211ENST00000565662 RGPD1P0DJD0 1748 aa23.47■■□□□ 1.35
USB1-211ENST00000565662 PCGF6Q9BYE7 350 aa23.46■■□□□ 1.35
USB1-211ENST00000565662 CD163L1Q9NR16 1453 aa23.46■■□□□ 1.35
USB1-211ENST00000565662 TCP11L2Q8N4U5 519 aa23.45■■□□□ 1.34
USB1-211ENST00000565662 NFAT5O94916 1531 aa23.44■■□□□ 1.34
USB1-211ENST00000565662 PARP4Q9UKK3 1724 aaKnown RBP23.44■■□□□ 1.34
USB1-211ENST00000565662 A0A1W2PP64 1363 aa23.43■■□□□ 1.34
USB1-211ENST00000565662 COL18A1P39060 1754 aa23.42■■□□□ 1.34
USB1-211ENST00000565662 ANKRD36BQ8N2N9 1353 aa23.41■■□□□ 1.34
USB1-211ENST00000565662 ARHGEF25Q86VW2 580 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms