RNA–Protein interactions for RNA: ENST00000565636.5

CDH13-207, Transcript of cadherin 13, humanhuman

TSL 5 BASIC

Gene CDH13, Length 810 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-207ENST00000565636 HSPA1LP34931 641 aa13.03□□□□□ -0.32
CDH13-207ENST00000565636 ARHGAP23Q9P227 1491 aa13.03□□□□□ -0.32
CDH13-207ENST00000565636 HRO43593 1189 aa13.02□□□□□ -0.33
CDH13-207ENST00000565636 ZDHHC16Q969W1 377 aa13.02□□□□□ -0.33
CDH13-207ENST00000565636 EID1Q9Y6B2 187 aa13.02□□□□□ -0.33
CDH13-207ENST00000565636 PRDM15P57071 1507 aaPredicted RBP13.02□□□□□ -0.33
CDH13-207ENST00000565636 CEP152O94986 1710 aa13.02□□□□□ -0.33
CDH13-207ENST00000565636 LRRC7Q96NW7 1537 aa13.01□□□□□ -0.33
CDH13-207ENST00000565636 CROCC2H7BZ55 1655 aa13.01□□□□□ -0.33
CDH13-207ENST00000565636 STRCP1A6NGW2 1772 aa13.01□□□□□ -0.33
CDH13-207ENST00000565636 SCAF11Q99590 1463 aaKnown RBP13□□□□□ -0.33
CDH13-207ENST00000565636 KANK1Q14678 1352 aa13□□□□□ -0.33
CDH13-207ENST00000565636 SLC4A5Q9BY07 1137 aa13□□□□□ -0.33
CDH13-207ENST00000565636 LMTK2Q8IWU2 1503 aa12.99□□□□□ -0.33
CDH13-207ENST00000565636 KANK4Q5T7N3 995 aaPredicted RBP12.99□□□□□ -0.33
CDH13-207ENST00000565636 TXNDC2Q86VQ3 553 aa12.99□□□□□ -0.33
CDH13-207ENST00000565636 VPS9D1Q9Y2B5 631 aa12.99□□□□□ -0.33
CDH13-207ENST00000565636 MED1Q15648 1581 aaPredicted RBP12.98□□□□□ -0.33
CDH13-207ENST00000565636 PIP4K2BP78356 416 aa12.98□□□□□ -0.33
CDH13-207ENST00000565636 CADPS2Q86UW7 1296 aa12.98□□□□□ -0.33
CDH13-207ENST00000565636 SPRYD3Q8NCJ5 442 aa12.98□□□□□ -0.33
CDH13-207ENST00000565636 SLC52A1Q9NWF4 448 aa12.98□□□□□ -0.33
CDH13-207ENST00000565636 ALKQ9UM73 1620 aa12.98□□□□□ -0.33
CDH13-207ENST00000565636 KIF15Q9NS87 1388 aa12.97□□□□□ -0.33
CDH13-207ENST00000565636 EMILIN3Q9NT22 766 aa12.97□□□□□ -0.33
CDH13-207ENST00000565636 PTPN23Q9H3S7 1636 aa12.97□□□□□ -0.33
CDH13-207ENST00000565636 ABCC5O15440 1437 aa12.96□□□□□ -0.33
CDH13-207ENST00000565636 ANKRD30AQ9BXX3 1397 aa12.96□□□□□ -0.33
CDH13-207ENST00000565636 HDGFP51858 240 aaKnown RBP12.96□□□□□ -0.33
CDH13-207ENST00000565636 XIRP1Q702N8 1843 aaKnown RBP12.96□□□□□ -0.33
CDH13-207ENST00000565636 TMEM2Q9UHN6 1383 aa12.95□□□□□ -0.34
CDH13-207ENST00000565636 LTKP29376 864 aa12.95□□□□□ -0.34
CDH13-207ENST00000565636 FBXW7Q969H0 707 aa12.95□□□□□ -0.34
CDH13-207ENST00000565636 KCTD12Q96CX2 325 aaKnown RBP12.95□□□□□ -0.34
CDH13-207ENST00000565636 FAM135BQ49AJ0 1406 aa12.95□□□□□ -0.34
CDH13-207ENST00000565636 DAPK1P53355 1430 aa12.94□□□□□ -0.34
CDH13-207ENST00000565636 RPRD2Q5VT52 1461 aaKnown RBP12.93□□□□□ -0.34
CDH13-207ENST00000565636 PIK3C2BO00750 1634 aa12.93□□□□□ -0.34
CDH13-207ENST00000565636 GOLGA8CPA6NN73 597 aa12.93□□□□□ -0.34
CDH13-207ENST00000565636 KCNA6P17658 529 aa12.93□□□□□ -0.34
CDH13-207ENST00000565636 ADAM33Q9BZ11 813 aa12.93□□□□□ -0.34
CDH13-207ENST00000565636 RRP7BPQ9NSQ0 103 aa12.93□□□□□ -0.34
CDH13-207ENST00000565636 TET3O43151 1660 aa12.93□□□□□ -0.34
CDH13-207ENST00000565636 LOC105371045A0A1W2PR82 267 aa12.92□□□□□ -0.34
CDH13-207ENST00000565636 FGD6Q6ZV73 1430 aa12.92□□□□□ -0.34
CDH13-207ENST00000565636 NBPF3Q9H094 633 aa12.92□□□□□ -0.34
CDH13-207ENST00000565636 EFCAB6Q5THR3 1501 aa12.92□□□□□ -0.34
CDH13-207ENST00000565636 NOS1P29475 1434 aa12.91□□□□□ -0.34
CDH13-207ENST00000565636 CAMK2BQ13554 666 aa12.91□□□□□ -0.34
CDH13-207ENST00000565636 IDI1Q13907 227 aa12.91□□□□□ -0.34
CDH13-207ENST00000565636 TYW1BQ6NUM6 668 aa12.91□□□□□ -0.34
CDH13-207ENST00000565636 ZBED2Q9BTP6 218 aa12.91□□□□□ -0.34
CDH13-207ENST00000565636 ADGRL2O95490 1459 aa12.91□□□□□ -0.34
CDH13-207ENST00000565636 NCOA3Q9Y6Q9 1424 aa12.9□□□□□ -0.34
CDH13-207ENST00000565636 PHF14O94880 888 aa12.9□□□□□ -0.34
CDH13-207ENST00000565636 MRPL50Q8N5N7 158 aaKnown RBP12.9□□□□□ -0.34
CDH13-207ENST00000565636 PLA2G2EQ9NZK7 142 aa12.9□□□□□ -0.34
CDH13-207ENST00000565636 CHD2O14647 1828 aaKnown RBP12.88□□□□□ -0.35
CDH13-207ENST00000565636 EPAS1Q99814 870 aa12.88□□□□□ -0.35
CDH13-207ENST00000565636 PCDHGA10Q9Y5H3 936 aa12.88□□□□□ -0.35
CDH13-207ENST00000565636 NKTRP30414 1462 aaKnown RBP12.88□□□□□ -0.35
CDH13-207ENST00000565636 PPP1R3GB7ZBB8 358 aa12.87□□□□□ -0.35
CDH13-207ENST00000565636 DPYSL4O14531 572 aa12.85□□□□□ -0.35
CDH13-207ENST00000565636 PROSER2Q86WR7 435 aaPredicted RBP12.85□□□□□ -0.35
CDH13-207ENST00000565636 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.85□□□□□ -0.35
CDH13-207ENST00000565636 RTN4Q9NQC3 1192 aaKnown RBP12.85□□□□□ -0.35
CDH13-207ENST00000565636 TBX22Q9Y458 520 aa12.85□□□□□ -0.35
CDH13-207ENST00000565636 GCC2Q8IWJ2 1684 aa12.85□□□□□ -0.35
CDH13-207ENST00000565636 NWD1Q149M9 1564 aa12.85□□□□□ -0.35
CDH13-207ENST00000565636 ADGRB3O60242 1522 aa12.84□□□□□ -0.35
CDH13-207ENST00000565636 BHMG1C9JSJ3 638 aaPredicted RBP12.84□□□□□ -0.35
CDH13-207ENST00000565636 TMEM94Q12767 1356 aa12.83□□□□□ -0.36
CDH13-207ENST00000565636 PIK3R4Q99570 1358 aa12.83□□□□□ -0.36
CDH13-207ENST00000565636 ANKRD50Q9ULJ7 1429 aa12.83□□□□□ -0.36
CDH13-207ENST00000565636 WDR70Q9NW82 654 aa12.83□□□□□ -0.36
CDH13-207ENST00000565636 PLEKHG1Q9ULL1 1385 aa12.82□□□□□ -0.36
CDH13-207ENST00000565636 PTPN5P54829 565 aa12.82□□□□□ -0.36
CDH13-207ENST00000565636 WNT2BQ93097 391 aa12.82□□□□□ -0.36
CDH13-207ENST00000565636 CFAP44Q96MT7 982 aa12.82□□□□□ -0.36
CDH13-207ENST00000565636 MSH6P52701 1360 aa12.81□□□□□ -0.36
CDH13-207ENST00000565636 MYO5BQ9ULV0 1848 aa12.81□□□□□ -0.36
CDH13-207ENST00000565636 PAXIP1Q6ZW49 1069 aaPredicted RBP12.81□□□□□ -0.36
CDH13-207ENST00000565636 SLAIN2Q9P270 581 aa12.81□□□□□ -0.36
CDH13-207ENST00000565636 RABGEF1Q9UJ41 708 aa12.81□□□□□ -0.36
CDH13-207ENST00000565636 ROCK1Q13464 1354 aa12.81□□□□□ -0.36
CDH13-207ENST00000565636 ZFYVE9O95405 1425 aa12.8□□□□□ -0.36
CDH13-207ENST00000565636 ROBO1Q9Y6N7 1651 aa12.8□□□□□ -0.36
CDH13-207ENST00000565636 CHIC2Q9UKJ5 165 aa12.8□□□□□ -0.36
CDH13-207ENST00000565636 TMEM131LA2VDJ0 1609 aa12.8□□□□□ -0.36
CDH13-207ENST00000565636 DIP2AQ14689 1571 aa12.79□□□□□ -0.36
CDH13-207ENST00000565636 RGS17Q9UGC6 210 aaPredicted RBP12.79□□□□□ -0.36
CDH13-207ENST00000565636 UNC13BO14795 1591 aa12.78□□□□□ -0.36
CDH13-207ENST00000565636 SPDYE16A6NNV3 312 aaPredicted RBP12.78□□□□□ -0.36
CDH13-207ENST00000565636 THSD4Q6ZMP0 1018 aa12.78□□□□□ -0.36
CDH13-207ENST00000565636 SLC26A8Q96RN1 970 aa12.78□□□□□ -0.36
CDH13-207ENST00000565636 E2F4Q16254 413 aa12.76□□□□□ -0.37
CDH13-207ENST00000565636 C6orf132Q5T0Z8 1188 aa12.76□□□□□ -0.37
CDH13-207ENST00000565636 C19orf44Q9H6X5 657 aa12.76□□□□□ -0.37
CDH13-207ENST00000565636 JCADQ9P266 1359 aa12.76□□□□□ -0.37
CDH13-207ENST00000565636 RIMS2Q9UQ26 1411 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms