RNA–Protein interactions for RNA: ENST00000565507.5

SCAPER-215, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 5

Gene SCAPER, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-215ENST00000565507 ABCC11Q96J66 1382 aa16.92■□□□□ 0.3
SCAPER-215ENST00000565507 POGKQ9P215 609 aa16.92■□□□□ 0.3
SCAPER-215ENST00000565507 PCDHB15Q9Y5E8 787 aa16.92■□□□□ 0.3
SCAPER-215ENST00000565507 A0A1W2PP64 1363 aa16.92■□□□□ 0.3
SCAPER-215ENST00000565507 TNRQ92752 1358 aa16.92■□□□□ 0.3
SCAPER-215ENST00000565507 VIRMAQ69YN4 1812 aaKnown RBP16.92■□□□□ 0.3
SCAPER-215ENST00000565507 U2AF1L5P0DN76 240 aaPredicted RBP16.91■□□□□ 0.3
SCAPER-215ENST00000565507 SRPK2P78362 688 aaKnown RBP16.91■□□□□ 0.3
SCAPER-215ENST00000565507 U2AF1Q01081 240 aaKnown RBP eCLIP16.91■□□□□ 0.3
SCAPER-215ENST00000565507 METP08581 1390 aa16.91■□□□□ 0.3
SCAPER-215ENST00000565507 BCL2L13Q9BXK5 485 aa16.9■□□□□ 0.3
SCAPER-215ENST00000565507 DAXXQ9UER7 740 aaPredicted RBP16.9■□□□□ 0.3
SCAPER-215ENST00000565507 MYH16Q9H6N6 1097 aa16.9■□□□□ 0.3
SCAPER-215ENST00000565507 PMFBP1Q8TBY8 1022 aa16.89■□□□□ 0.29
SCAPER-215ENST00000565507 SEC24BO95487 1268 aa16.89■□□□□ 0.29
SCAPER-215ENST00000565507 LTKP29376 864 aa16.89■□□□□ 0.29
SCAPER-215ENST00000565507 TXNDC2Q86VQ3 553 aa16.88■□□□□ 0.29
SCAPER-215ENST00000565507 PLEKHF1Q96S99 279 aa16.88■□□□□ 0.29
SCAPER-215ENST00000565507 COL3A1P02461 1466 aaPredicted RBP16.88■□□□□ 0.29
SCAPER-215ENST00000565507 NLRP1Q9C000 1473 aa16.86■□□□□ 0.29
SCAPER-215ENST00000565507 CD163L1Q9NR16 1453 aa16.86■□□□□ 0.29
SCAPER-215ENST00000565507 GGNBP2Q9H3C7 697 aa16.86■□□□□ 0.29
SCAPER-215ENST00000565507 NCKAP5LQ9HCH0 1330 aa16.86■□□□□ 0.29
SCAPER-215ENST00000565507 NRXN3Q9Y4C0 1643 aa16.85■□□□□ 0.29
SCAPER-215ENST00000565507 FYB1O15117 783 aa16.85■□□□□ 0.29
SCAPER-215ENST00000565507 CT47B1P0C2W7 299 aaPredicted RBP16.84■□□□□ 0.29
SCAPER-215ENST00000565507 CDK19Q9BWU1 502 aa16.84■□□□□ 0.29
SCAPER-215ENST00000565507 TRIM35Q9UPQ4 493 aa16.84■□□□□ 0.29
SCAPER-215ENST00000565507 MED14O60244 1454 aa16.84■□□□□ 0.29
SCAPER-215ENST00000565507 MVPQ14764 893 aaKnown RBP16.84■□□□□ 0.29
SCAPER-215ENST00000565507 SLC26A8Q96RN1 970 aa16.84■□□□□ 0.29
SCAPER-215ENST00000565507 ATAD2Q6PL18 1390 aa16.84■□□□□ 0.29
SCAPER-215ENST00000565507 TMPOP42166 694 aaKnown RBP16.83■□□□□ 0.29
SCAPER-215ENST00000565507 TSR2Q969E8 191 aaKnown RBP16.83■□□□□ 0.29
SCAPER-215ENST00000565507 PDZRN3Q9UPQ7 1066 aa16.83■□□□□ 0.29
SCAPER-215ENST00000565507 TMEM2Q9UHN6 1383 aa16.83■□□□□ 0.28
SCAPER-215ENST00000565507 SETD1AO15047 1707 aaKnown RBP16.82■□□□□ 0.28
SCAPER-215ENST00000565507 ZKSCAN2Q63HK3 967 aa16.82■□□□□ 0.28
SCAPER-215ENST00000565507 CABP1Q9NZU7 370 aa16.82■□□□□ 0.28
SCAPER-215ENST00000565507 U2SURPO15042 1029 aaKnown RBP16.82■□□□□ 0.28
SCAPER-215ENST00000565507 GSE1Q14687 1217 aa16.82■□□□□ 0.28
SCAPER-215ENST00000565507 RWDD1Q9H446 243 aaPredicted RBP16.82■□□□□ 0.28
SCAPER-215ENST00000565507 FBLN1P23142 703 aa16.81■□□□□ 0.28
SCAPER-215ENST00000565507 EXOSC9Q06265 439 aaKnown RBP16.81■□□□□ 0.28
SCAPER-215ENST00000565507 TERF2IPQ9NYB0 399 aa16.81■□□□□ 0.28
SCAPER-215ENST00000565507 DZIP1LQ8IYY4 767 aaKnown RBP16.81■□□□□ 0.28
SCAPER-215ENST00000565507 PNPLA6Q8IY17 1366 aa16.8■□□□□ 0.28
SCAPER-215ENST00000565507 UBR1Q8IWV7 1749 aa16.8■□□□□ 0.28
SCAPER-215ENST00000565507 ANKRD26Q9UPS8 1709 aa16.8■□□□□ 0.28
SCAPER-215ENST00000565507 NUTM2FA1L443 756 aa16.79■□□□□ 0.28
SCAPER-215ENST00000565507 FRAT2O75474 233 aaPredicted RBP16.79■□□□□ 0.28
SCAPER-215ENST00000565507 IL16Q14005 1332 aa16.79■□□□□ 0.28
SCAPER-215ENST00000565507 TRIM27P14373 513 aa16.79■□□□□ 0.28
SCAPER-215ENST00000565507 C3P01024 1663 aa16.78■□□□□ 0.28
SCAPER-215ENST00000565507 SSH1Q8WYL5 1049 aa16.78■□□□□ 0.28
SCAPER-215ENST00000565507 FTSJ3Q8IY81 847 aaKnown RBP16.78■□□□□ 0.28
SCAPER-215ENST00000565507 SMC4Q9NTJ3 1288 aa16.78■□□□□ 0.28
SCAPER-215ENST00000565507 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.77■□□□□ 0.27
SCAPER-215ENST00000565507 ROBO2Q9HCK4 1378 aa16.76■□□□□ 0.27
SCAPER-215ENST00000565507 ADAMTS13Q76LX8 1427 aa16.76■□□□□ 0.27
SCAPER-215ENST00000565507 TBC1D32Q96NH3 1257 aa16.76■□□□□ 0.27
SCAPER-215ENST00000565507 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.76■□□□□ 0.27
SCAPER-215ENST00000565507 IL27Q8NEV9 243 aa16.76■□□□□ 0.27
SCAPER-215ENST00000565507 DIAPH1O60610 1272 aaKnown RBP16.75■□□□□ 0.27
SCAPER-215ENST00000565507 RIPK4P57078 832 aa16.75■□□□□ 0.27
SCAPER-215ENST00000565507 ATF7IPQ6VMQ6 1270 aa16.75■□□□□ 0.27
SCAPER-215ENST00000565507 FER1L4A9Z1Z3 1794 aa16.75■□□□□ 0.27
SCAPER-215ENST00000565507 HDAC1Q13547 482 aaPredicted RBP16.74■□□□□ 0.27
SCAPER-215ENST00000565507 HDGFL2Q7Z4V5 671 aaPredicted RBP16.74■□□□□ 0.27
SCAPER-215ENST00000565507 BECN1Q14457 450 aa16.73■□□□□ 0.27
SCAPER-215ENST00000565507 ZRANB1Q9UGI0 708 aa16.73■□□□□ 0.27
SCAPER-215ENST00000565507 NOB1Q9ULX3 412 aaKnown RBP16.73■□□□□ 0.27
SCAPER-215ENST00000565507 DDX19BQ9UMR2 479 aa16.73■□□□□ 0.27
SCAPER-215ENST00000565507 CDC42BPGQ6DT37 1551 aa16.72■□□□□ 0.27
SCAPER-215ENST00000565507 PTPRUQ92729 1446 aa16.71■□□□□ 0.27
SCAPER-215ENST00000565507 FCHSD2O94868 740 aa16.71■□□□□ 0.27
SCAPER-215ENST00000565507 ANTXR1Q9H6X2 564 aa16.71■□□□□ 0.27
SCAPER-215ENST00000565507 WASLO00401 505 aaPredicted RBP16.71■□□□□ 0.27
SCAPER-215ENST00000565507 ITPRIPQ8IWB1 547 aa16.71■□□□□ 0.27
SCAPER-215ENST00000565507 UPF2Q9HAU5 1272 aaKnown RBP16.71■□□□□ 0.27
SCAPER-215ENST00000565507 PNNQ9H307 717 aaKnown RBP16.7■□□□□ 0.26
SCAPER-215ENST00000565507 PRR36Q9H6K5 1346 aa16.7■□□□□ 0.26
SCAPER-215ENST00000565507 SMC5Q8IY18 1101 aa16.7■□□□□ 0.26
SCAPER-215ENST00000565507 TMEM57Q8N5G2 664 aa16.7■□□□□ 0.26
SCAPER-215ENST00000565507 ZBTB40Q9NUA8 1239 aa16.7■□□□□ 0.26
SCAPER-215ENST00000565507 KIF20BQ96Q89 1820 aa16.7■□□□□ 0.26
SCAPER-215ENST00000565507 LRRC7Q96NW7 1537 aa16.69■□□□□ 0.26
SCAPER-215ENST00000565507 RBM33Q96EV2 1170 aaKnown RBP16.69■□□□□ 0.26
SCAPER-215ENST00000565507 RSPH6AQ9H0K4 717 aa16.69■□□□□ 0.26
SCAPER-215ENST00000565507 POLKQ9UBT6 870 aa16.69■□□□□ 0.26
SCAPER-215ENST00000565507 FAM135BQ49AJ0 1406 aa16.69■□□□□ 0.26
SCAPER-215ENST00000565507 DLC1Q96QB1 1528 aa16.69■□□□□ 0.26
SCAPER-215ENST00000565507 TBC1D2Q9BYX2 928 aa16.68■□□□□ 0.26
SCAPER-215ENST00000565507 KIF16BQ96L93 1317 aa16.68■□□□□ 0.26
SCAPER-215ENST00000565507 HDGFP51858 240 aaKnown RBP16.68■□□□□ 0.26
SCAPER-215ENST00000565507 ALDH1L2Q3SY69 923 aa16.68■□□□□ 0.26
SCAPER-215ENST00000565507 NUDT16Q96DE0 195 aaKnown RBP16.68■□□□□ 0.26
SCAPER-215ENST00000565507 PLEKHG1Q9ULL1 1385 aa16.67■□□□□ 0.26
SCAPER-215ENST00000565507 ATP7BP35670 1465 aa16.67■□□□□ 0.26
SCAPER-215ENST00000565507 SLKQ9H2G2 1235 aaPredicted RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms