RNA–Protein interactions for RNA: ENST00000565235.2

CDH16-203, Transcript of cadherin 16, humanhuman

TSL 3

Gene CDH16, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-203ENST00000565235 CCER1Q8TC90 406 aaPredicted RBP19.02■□□□□ 0.64
CDH16-203ENST00000565235 BRD4O60885 1362 aaPredicted RBP19.02■□□□□ 0.64
CDH16-203ENST00000565235 SF3B2Q13435 895 aaKnown RBP19■□□□□ 0.63
CDH16-203ENST00000565235 PPIP5K1Q6PFW1 1433 aa18.99■□□□□ 0.63
CDH16-203ENST00000565235 TRPM3Q9HCF6 1732 aaPredicted RBP18.98■□□□□ 0.63
CDH16-203ENST00000565235 GJD4Q96KN9 370 aaPredicted RBP18.98■□□□□ 0.63
CDH16-203ENST00000565235 PUS7Q96PZ0 661 aaKnown RBP18.96■□□□□ 0.63
CDH16-203ENST00000565235 ACEP12821 1306 aa18.96■□□□□ 0.63
CDH16-203ENST00000565235 ATRNO75882 1429 aa18.95■□□□□ 0.62
CDH16-203ENST00000565235 PLEKHG5O94827 1062 aa18.95■□□□□ 0.62
CDH16-203ENST00000565235 CABP2Q9NPB3 220 aa18.95■□□□□ 0.62
CDH16-203ENST00000565235 CCDC9Q9Y3X0 531 aaKnown RBP18.95■□□□□ 0.62
CDH16-203ENST00000565235 ALS2Q96Q42 1657 aa18.95■□□□□ 0.62
CDH16-203ENST00000565235 LMOD2Q6P5Q4 547 aa18.94■□□□□ 0.62
CDH16-203ENST00000565235 UNC5CLQ8IV45 518 aa18.94■□□□□ 0.62
CDH16-203ENST00000565235 A0A0G2JS52 829 aa18.92■□□□□ 0.62
CDH16-203ENST00000565235 MYT1Q01538 1121 aa18.92■□□□□ 0.62
CDH16-203ENST00000565235 USP47Q96K76 1375 aa18.92■□□□□ 0.62
CDH16-203ENST00000565235 NINLQ9Y2I6 1382 aa18.91■□□□□ 0.62
CDH16-203ENST00000565235 ZNF692Q9BU19 519 aaPredicted RBP18.9■□□□□ 0.62
CDH16-203ENST00000565235 USP6P35125 1406 aa18.9■□□□□ 0.62
CDH16-203ENST00000565235 MARF1Q9Y4F3 1742 aaKnown RBP18.89■□□□□ 0.61
CDH16-203ENST00000565235 PAK3O75914 559 aaPredicted RBP18.89■□□□□ 0.61
CDH16-203ENST00000565235 CABP1Q9NZU7 370 aa18.89■□□□□ 0.61
CDH16-203ENST00000565235 ABCA3Q99758 1704 aa18.88■□□□□ 0.61
CDH16-203ENST00000565235 TESK2Q96S53 571 aa18.88■□□□□ 0.61
CDH16-203ENST00000565235 BCL9LQ86UU0 1499 aa18.88■□□□□ 0.61
CDH16-203ENST00000565235 ST20-MTHFSA0A0A6YYL1 179 aa18.87■□□□□ 0.61
CDH16-203ENST00000565235 SLIT2O94813 1529 aa18.86■□□□□ 0.61
CDH16-203ENST00000565235 CPSF1Q10570 1443 aaKnown RBP18.86■□□□□ 0.61
CDH16-203ENST00000565235 CDCA8Q53HL2 280 aa18.85■□□□□ 0.61
CDH16-203ENST00000565235 SEPT12Q8IYM1 358 aa18.85■□□□□ 0.61
CDH16-203ENST00000565235 BLMP54132 1417 aaPredicted RBP18.84■□□□□ 0.61
CDH16-203ENST00000565235 SSH2Q76I76 1423 aa18.84■□□□□ 0.61
CDH16-203ENST00000565235 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.84■□□□□ 0.61
CDH16-203ENST00000565235 TMF1P82094 1093 aa18.84■□□□□ 0.61
CDH16-203ENST00000565235 CRYBG1Q9Y4K1 1723 aa18.83■□□□□ 0.61
CDH16-203ENST00000565235 USP19O94966 1318 aa18.83■□□□□ 0.61
CDH16-203ENST00000565235 TTC21AQ8NDW8 1320 aa18.83■□□□□ 0.61
CDH16-203ENST00000565235 NLRP13Q86W25 1043 aa18.83■□□□□ 0.6
CDH16-203ENST00000565235 ABTB2Q8N961 1025 aa18.83■□□□□ 0.6
CDH16-203ENST00000565235 KRT27Q7Z3Y8 459 aa18.82■□□□□ 0.6
CDH16-203ENST00000565235 CABLES1Q8TDN4 633 aa18.82■□□□□ 0.6
CDH16-203ENST00000565235 NWD2Q9ULI1 1742 aa18.82■□□□□ 0.6
CDH16-203ENST00000565235 SRCAPQ6ZRS2 3230 aa18.81■□□□□ 0.6
CDH16-203ENST00000565235 VPS72Q15906 364 aa18.81■□□□□ 0.6
CDH16-203ENST00000565235 DEFB132Q7Z7B7 95 aa18.81■□□□□ 0.6
CDH16-203ENST00000565235 TERF2IPQ9NYB0 399 aa18.81■□□□□ 0.6
CDH16-203ENST00000565235 KTN1Q86UP2 1357 aaKnown RBP18.81■□□□□ 0.6
CDH16-203ENST00000565235 HDGFL2Q7Z4V5 671 aaPredicted RBP18.8■□□□□ 0.6
CDH16-203ENST00000565235 PHRF1Q9P1Y6 1649 aaKnown RBP18.8■□□□□ 0.6
CDH16-203ENST00000565235 AKAP12Q02952 1782 aa18.8■□□□□ 0.6
CDH16-203ENST00000565235 COL14A1Q05707 1796 aaKnown RBP18.8■□□□□ 0.6
CDH16-203ENST00000565235 NRKQ7Z2Y5 1582 aa18.8■□□□□ 0.6
CDH16-203ENST00000565235 CPDO75976 1380 aa18.8■□□□□ 0.6
CDH16-203ENST00000565235 BAG6P46379 1132 aa18.79■□□□□ 0.6
CDH16-203ENST00000565235 EDC4Q6P2E9 1401 aaKnown RBP18.78■□□□□ 0.6
CDH16-203ENST00000565235 CD163L1Q9NR16 1453 aa18.77■□□□□ 0.6
CDH16-203ENST00000565235 TTC21BQ7Z4L5 1316 aa18.77■□□□□ 0.6
CDH16-203ENST00000565235 PLCH1Q4KWH8 1693 aa18.77■□□□□ 0.6
CDH16-203ENST00000565235 PRDM11Q9NQV5 511 aa18.77■□□□□ 0.6
CDH16-203ENST00000565235 SLIT3O75094 1523 aa18.77■□□□□ 0.6
CDH16-203ENST00000565235 MON2Q7Z3U7 1717 aa18.77■□□□□ 0.59
CDH16-203ENST00000565235 FAM83GA6ND36 823 aa18.75■□□□□ 0.59
CDH16-203ENST00000565235 EIF4G2P78344 907 aaKnown RBP eCLIP18.75■□□□□ 0.59
CDH16-203ENST00000565235 TMC1Q8TDI8 760 aa18.75■□□□□ 0.59
CDH16-203ENST00000565235 KIAA0232Q92628 1395 aa18.75■□□□□ 0.59
CDH16-203ENST00000565235 PIK3C2AO00443 1686 aa18.75■□□□□ 0.59
CDH16-203ENST00000565235 A0A1W2PP64 1363 aa18.74■□□□□ 0.59
CDH16-203ENST00000565235 ANKRD36BQ8N2N9 1353 aa18.74■□□□□ 0.59
CDH16-203ENST00000565235 NLRP6P59044 892 aa18.74■□□□□ 0.59
CDH16-203ENST00000565235 USP31Q70CQ4 1352 aa18.73■□□□□ 0.59
CDH16-203ENST00000565235 GCP02774 474 aa18.73■□□□□ 0.59
CDH16-203ENST00000565235 KCNH5Q8NCM2 988 aa18.73■□□□□ 0.59
CDH16-203ENST00000565235 FAM98CQ17RN3 349 aaKnown RBP18.72■□□□□ 0.59
CDH16-203ENST00000565235 NUTM2GQ5VZR2 741 aa18.72■□□□□ 0.59
CDH16-203ENST00000565235 SLC12A5Q9H2X9 1139 aa18.72■□□□□ 0.59
CDH16-203ENST00000565235 BTG4Q9NY30 223 aa18.72■□□□□ 0.59
CDH16-203ENST00000565235 USP54Q70EL1 1684 aa18.72■□□□□ 0.59
CDH16-203ENST00000565235 NRAPQ86VF7 1730 aa18.71■□□□□ 0.59
CDH16-203ENST00000565235 ABCC6O95255 1503 aa18.7■□□□□ 0.58
CDH16-203ENST00000565235 PSDA5PKW4 1024 aaPredicted RBP18.7■□□□□ 0.58
CDH16-203ENST00000565235 ONECUT3O60422 494 aaPredicted RBP18.7■□□□□ 0.58
CDH16-203ENST00000565235 AATKQ6ZMQ8 1374 aa18.68■□□□□ 0.58
CDH16-203ENST00000565235 ZC3H6P61129 1189 aaKnown RBP18.68■□□□□ 0.58
CDH16-203ENST00000565235 GLI3P10071 1580 aa18.68■□□□□ 0.58
CDH16-203ENST00000565235 LMO7Q8WWI1 1683 aa18.67■□□□□ 0.58
CDH16-203ENST00000565235 EP400Q96L91 3159 aa18.66■□□□□ 0.58
CDH16-203ENST00000565235 OVOS2A0A0J9YW53 1432 aa18.66■□□□□ 0.58
CDH16-203ENST00000565235 OVOS2Q6IE36 1432 aa18.66■□□□□ 0.58
CDH16-203ENST00000565235 NFAT5O94916 1531 aa18.65■□□□□ 0.58
CDH16-203ENST00000565235 HSPA5P11021 654 aaKnown RBP18.65■□□□□ 0.58
CDH16-203ENST00000565235 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.65■□□□□ 0.58
CDH16-203ENST00000565235 SPATA31A5Q5VU36 1347 aa18.65■□□□□ 0.58
CDH16-203ENST00000565235 SPATA31A7Q8IWB4 1347 aa18.65■□□□□ 0.58
CDH16-203ENST00000565235 EN1Q05925 392 aaPredicted RBP18.64■□□□□ 0.57
CDH16-203ENST00000565235 CHRNA2Q15822 529 aa18.64■□□□□ 0.57
CDH16-203ENST00000565235 ARHGEF25Q86VW2 580 aa18.63■□□□□ 0.57
CDH16-203ENST00000565235 COL5A2P05997 1499 aaPredicted RBP18.63■□□□□ 0.57
CDH16-203ENST00000565235 NME9Q86XW9 330 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms