RNA–Protein interactions for RNA: ENST00000565224.5

SMG1-210, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-210ENST00000565224 PLEKHF1Q96S99 279 aa9.24□□□□□ -0.93
SMG1-210ENST00000565224 COL3A1P02461 1466 aaPredicted RBP9.24□□□□□ -0.93
SMG1-210ENST00000565224 ATAD2Q6PL18 1390 aa9.24□□□□□ -0.93
SMG1-210ENST00000565224 U2SURPO15042 1029 aaKnown RBP9.24□□□□□ -0.93
SMG1-210ENST00000565224 SMC4Q9NTJ3 1288 aa9.24□□□□□ -0.93
SMG1-210ENST00000565224 SLC52A1Q9NWF4 448 aa9.24□□□□□ -0.93
SMG1-210ENST00000565224 DIP2CQ9Y2E4 1556 aa9.23□□□□□ -0.93
SMG1-210ENST00000565224 MED14O60244 1454 aa9.23□□□□□ -0.93
SMG1-210ENST00000565224 KDM4FA0A1W2PPD8 638 aa9.23□□□□□ -0.93
SMG1-210ENST00000565224 TMPOP42166 694 aaKnown RBP9.23□□□□□ -0.93
SMG1-210ENST00000565224 EXOSC9Q06265 439 aaKnown RBP9.23□□□□□ -0.93
SMG1-210ENST00000565224 IDI1Q13907 227 aa9.23□□□□□ -0.93
SMG1-210ENST00000565224 GGNBP2Q9H3C7 697 aa9.23□□□□□ -0.93
SMG1-210ENST00000565224 BRPF3Q9ULD4 1205 aa9.23□□□□□ -0.93
SMG1-210ENST00000565224 IL16Q14005 1332 aa9.23□□□□□ -0.93
SMG1-210ENST00000565224 TERF2IPQ9NYB0 399 aa9.23□□□□□ -0.93
SMG1-210ENST00000565224 STK26Q9P289 416 aa9.23□□□□□ -0.93
SMG1-210ENST00000565224 TRIM35Q9UPQ4 493 aa9.23□□□□□ -0.93
SMG1-210ENST00000565224 RTN4Q9NQC3 1192 aaKnown RBP9.22□□□□□ -0.93
SMG1-210ENST00000565224 PTPRMP28827 1452 aa9.22□□□□□ -0.93
SMG1-210ENST00000565224 TRIM27P14373 513 aa9.22□□□□□ -0.93
SMG1-210ENST00000565224 HDAC1Q13547 482 aaPredicted RBP9.22□□□□□ -0.93
SMG1-210ENST00000565224 SSH1Q8WYL5 1049 aa9.22□□□□□ -0.93
SMG1-210ENST00000565224 DDX19BQ9UMR2 479 aa9.22□□□□□ -0.93
SMG1-210ENST00000565224 FYB1O15117 783 aa9.21□□□□□ -0.93
SMG1-210ENST00000565224 ATF7IPQ6VMQ6 1270 aa9.21□□□□□ -0.93
SMG1-210ENST00000565224 SLKQ9H2G2 1235 aaPredicted RBP9.21□□□□□ -0.93
SMG1-210ENST00000565224 SENP3Q9H4L4 574 aaPredicted RBP9.21□□□□□ -0.93
SMG1-210ENST00000565224 ARHGEF40Q8TER5 1519 aa9.21□□□□□ -0.94
SMG1-210ENST00000565224 ITPRIPQ8IWB1 547 aa9.21□□□□□ -0.94
SMG1-210ENST00000565224 TBC1D2Q9BYX2 928 aa9.21□□□□□ -0.94
SMG1-210ENST00000565224 PNNQ9H307 717 aaKnown RBP9.21□□□□□ -0.94
SMG1-210ENST00000565224 ANTXR1Q9H6X2 564 aa9.21□□□□□ -0.94
SMG1-210ENST00000565224 CD163L1Q9NR16 1453 aa9.21□□□□□ -0.94
SMG1-210ENST00000565224 MINK1Q8N4C8 1332 aaPredicted RBP9.21□□□□□ -0.94
SMG1-210ENST00000565224 PRAM1Q96QH2 718 aa9.2□□□□□ -0.94
SMG1-210ENST00000565224 POGKQ9P215 609 aa9.2□□□□□ -0.94
SMG1-210ENST00000565224 CLTCQ00610 1675 aaKnown RBP9.2□□□□□ -0.94
SMG1-210ENST00000565224 YTHDC2Q9H6S0 1430 aaKnown RBP9.2□□□□□ -0.94
SMG1-210ENST00000565224 DIAPH1O60610 1272 aaKnown RBP9.2□□□□□ -0.94
SMG1-210ENST00000565224 RIPK4P57078 832 aa9.2□□□□□ -0.94
SMG1-210ENST00000565224 HDGFL2Q7Z4V5 671 aaPredicted RBP9.2□□□□□ -0.94
SMG1-210ENST00000565224 NOB1Q9ULX3 412 aaKnown RBP9.2□□□□□ -0.94
SMG1-210ENST00000565224 PNPLA6Q8IY17 1366 aa9.19□□□□□ -0.94
SMG1-210ENST00000565224 ANKRD26Q9UPS8 1709 aa9.19□□□□□ -0.94
SMG1-210ENST00000565224 KIF16BQ96L93 1317 aa9.19□□□□□ -0.94
SMG1-210ENST00000565224 TMEM131LA2VDJ0 1609 aa9.19□□□□□ -0.94
SMG1-210ENST00000565224 IPO8O15397 1037 aaKnown RBP9.19□□□□□ -0.94
SMG1-210ENST00000565224 SMC5Q8IY18 1101 aa9.19□□□□□ -0.94
SMG1-210ENST00000565224 POTEDQ86YR6 584 aa9.18□□□□□ -0.94
SMG1-210ENST00000565224 TMEM57Q8N5G2 664 aa9.18□□□□□ -0.94
SMG1-210ENST00000565224 ALDH1L2Q3SY69 923 aa9.17□□□□□ -0.94
SMG1-210ENST00000565224 C22orf23Q9BZE7 217 aa9.17□□□□□ -0.94
SMG1-210ENST00000565224 ZBTB40Q9NUA8 1239 aa9.17□□□□□ -0.94
SMG1-210ENST00000565224 PREX1Q8TCU6 1659 aa9.17□□□□□ -0.94
SMG1-210ENST00000565224 CDC42BPGQ6DT37 1551 aa9.17□□□□□ -0.94
SMG1-210ENST00000565224 FCHSD2O94868 740 aa9.17□□□□□ -0.94
SMG1-210ENST00000565224 MFAP1P55081 439 aaKnown RBP9.17□□□□□ -0.94
SMG1-210ENST00000565224 CDK19Q9BWU1 502 aa9.17□□□□□ -0.94
SMG1-210ENST00000565224 CABP1Q9NZU7 370 aa9.16□□□□□ -0.94
SMG1-210ENST00000565224 ALKQ9UM73 1620 aa9.16□□□□□ -0.94
SMG1-210ENST00000565224 FAM135BQ49AJ0 1406 aa9.16□□□□□ -0.94
SMG1-210ENST00000565224 MLECQ14165 292 aa9.15□□□□□ -0.94
SMG1-210ENST00000565224 ZNF428Q96B54 188 aa9.15□□□□□ -0.94
SMG1-210ENST00000565224 LRRC7Q96NW7 1537 aa9.15□□□□□ -0.94
SMG1-210ENST00000565224 MYO5BQ9ULV0 1848 aa9.15□□□□□ -0.94
SMG1-210ENST00000565224 BRPF1P55201 1214 aaPredicted RBP9.15□□□□□ -0.95
SMG1-210ENST00000565224 NUCB1Q02818 461 aa9.15□□□□□ -0.95
SMG1-210ENST00000565224 RSPH6AQ9H0K4 717 aa9.15□□□□□ -0.95
SMG1-210ENST00000565224 PPIP5K1Q6PFW1 1433 aa9.15□□□□□ -0.95
SMG1-210ENST00000565224 PRKAR2BP31323 418 aa9.14□□□□□ -0.95
SMG1-210ENST00000565224 KIF20BQ96Q89 1820 aa9.14□□□□□ -0.95
SMG1-210ENST00000565224 ATP7BP35670 1465 aa9.14□□□□□ -0.95
SMG1-210ENST00000565224 L1TD1Q5T7N2 865 aaKnown RBP9.14□□□□□ -0.95
SMG1-210ENST00000565224 FBXO31Q5XUX0 539 aaPredicted RBP9.14□□□□□ -0.95
SMG1-210ENST00000565224 CHMP5Q9NZZ3 219 aa9.14□□□□□ -0.95
SMG1-210ENST00000565224 POLKQ9UBT6 870 aa9.14□□□□□ -0.95
SMG1-210ENST00000565224 CALD1Q05682 793 aaKnown RBP9.13□□□□□ -0.95
SMG1-210ENST00000565224 CHMP4BQ9H444 224 aaKnown RBP9.13□□□□□ -0.95
SMG1-210ENST00000565224 DLC1Q96QB1 1528 aa9.13□□□□□ -0.95
SMG1-210ENST00000565224 NFE2L2Q16236 605 aa9.13□□□□□ -0.95
SMG1-210ENST00000565224 CHD1LQ86WJ1 897 aa9.13□□□□□ -0.95
SMG1-210ENST00000565224 HSCBQ8IWL3 235 aa9.13□□□□□ -0.95
SMG1-210ENST00000565224 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.13□□□□□ -0.95
SMG1-210ENST00000565224 SPRYD3Q8NCJ5 442 aa9.13□□□□□ -0.95
SMG1-210ENST00000565224 STAG3Q9UJ98 1225 aa9.13□□□□□ -0.95
SMG1-210ENST00000565224 MCM4P33991 863 aa9.12□□□□□ -0.95
SMG1-210ENST00000565224 FAM43AQ8N2R8 423 aa9.12□□□□□ -0.95
SMG1-210ENST00000565224 ARHGAP45Q92619 1136 aa9.12□□□□□ -0.95
SMG1-210ENST00000565224 ANO8Q9HCE9 1232 aaPredicted RBP9.12□□□□□ -0.95
SMG1-210ENST00000565224 ADAMTSL3P82987 1691 aa9.12□□□□□ -0.95
SMG1-210ENST00000565224 PTCH1Q13635 1447 aa9.12□□□□□ -0.95
SMG1-210ENST00000565224 RBM25P49756 843 aaKnown RBP9.12□□□□□ -0.95
SMG1-210ENST00000565224 LNPKQ9C0E8 428 aa9.12□□□□□ -0.95
SMG1-210ENST00000565224 PIK3R4Q99570 1358 aa9.11□□□□□ -0.95
SMG1-210ENST00000565224 VAMP4O75379 141 aa9.11□□□□□ -0.95
SMG1-210ENST00000565224 MRPL50Q8N5N7 158 aaKnown RBP9.11□□□□□ -0.95
SMG1-210ENST00000565224 PHACTR3Q96KR7 559 aa9.11□□□□□ -0.95
SMG1-210ENST00000565224 IFT57Q9NWB7 429 aa9.11□□□□□ -0.95
SMG1-210ENST00000565224 REREQ9P2R6 1566 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms