RNA–Protein interactions for RNA: ENST00000565205.5

TRAPPC2L-209, Transcript of trafficking protein particle complex 2 like, humanhuman

TSL 1 (best)

Gene TRAPPC2L, Length 1,084 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2L-209ENST00000565205 NGDNQ8NEJ9 315 aaKnown RBP18.44■□□□□ 0.54
TRAPPC2L-209ENST00000565205 NUDT16Q96DE0 195 aaKnown RBP18.44■□□□□ 0.54
TRAPPC2L-209ENST00000565205 SRPK2P78362 688 aaKnown RBP18.43■□□□□ 0.54
TRAPPC2L-209ENST00000565205 CARD11Q9BXL7 1154 aa18.43■□□□□ 0.54
TRAPPC2L-209ENST00000565205 ARHGEF10O15013 1369 aa18.42■□□□□ 0.54
TRAPPC2L-209ENST00000565205 TRPM3Q9HCF6 1732 aaPredicted RBP18.41■□□□□ 0.54
TRAPPC2L-209ENST00000565205 CCDC61Q9Y6R9 512 aa18.41■□□□□ 0.54
TRAPPC2L-209ENST00000565205 EVC2Q86UK5 1308 aa18.41■□□□□ 0.54
TRAPPC2L-209ENST00000565205 LMOD2Q6P5Q4 547 aa18.4■□□□□ 0.54
TRAPPC2L-209ENST00000565205 HAP1P54257 671 aaPredicted RBP18.38■□□□□ 0.53
TRAPPC2L-209ENST00000565205 TIMELESSQ9UNS1 1208 aa18.38■□□□□ 0.53
TRAPPC2L-209ENST00000565205 SLIT2O94813 1529 aa18.38■□□□□ 0.53
TRAPPC2L-209ENST00000565205 ALS2Q96Q42 1657 aa18.38■□□□□ 0.53
TRAPPC2L-209ENST00000565205 CCER1Q8TC90 406 aaPredicted RBP18.37■□□□□ 0.53
TRAPPC2L-209ENST00000565205 SBNO2Q9Y2G9 1366 aa18.37■□□□□ 0.53
TRAPPC2L-209ENST00000565205 PPIP5K1Q6PFW1 1433 aa18.37■□□□□ 0.53
TRAPPC2L-209ENST00000565205 POLR3AO14802 1390 aaPredicted RBP18.36■□□□□ 0.53
TRAPPC2L-209ENST00000565205 ABCA3Q99758 1704 aa18.36■□□□□ 0.53
TRAPPC2L-209ENST00000565205 CABP2Q9NPB3 220 aa18.36■□□□□ 0.53
TRAPPC2L-209ENST00000565205 PLEKHG3A1L390 1219 aa18.35■□□□□ 0.53
TRAPPC2L-209ENST00000565205 UNC5CLQ8IV45 518 aa18.35■□□□□ 0.53
TRAPPC2L-209ENST00000565205 SEPT12Q8IYM1 358 aa18.35■□□□□ 0.53
TRAPPC2L-209ENST00000565205 ACEP12821 1306 aa18.34■□□□□ 0.53
TRAPPC2L-209ENST00000565205 PAK3O75914 559 aaPredicted RBP18.34■□□□□ 0.53
TRAPPC2L-209ENST00000565205 SF3B2Q13435 895 aaKnown RBP18.32■□□□□ 0.52
TRAPPC2L-209ENST00000565205 PLEKHG5O94827 1062 aa18.31■□□□□ 0.52
TRAPPC2L-209ENST00000565205 CABLES1Q8TDN4 633 aa18.3■□□□□ 0.52
TRAPPC2L-209ENST00000565205 PLCH1Q4KWH8 1693 aa18.3■□□□□ 0.52
TRAPPC2L-209ENST00000565205 BRD4O60885 1362 aaPredicted RBP18.3■□□□□ 0.52
TRAPPC2L-209ENST00000565205 SLC24A1O60721 1099 aa18.28■□□□□ 0.52
TRAPPC2L-209ENST00000565205 R3HDM1Q15032 1099 aaKnown RBP18.28■□□□□ 0.52
TRAPPC2L-209ENST00000565205 CABP1Q9NZU7 370 aa18.28■□□□□ 0.52
TRAPPC2L-209ENST00000565205 CRYBG1Q9Y4K1 1723 aa18.28■□□□□ 0.52
TRAPPC2L-209ENST00000565205 KRT27Q7Z3Y8 459 aa18.27■□□□□ 0.52
TRAPPC2L-209ENST00000565205 NWD2Q9ULI1 1742 aa18.26■□□□□ 0.51
TRAPPC2L-209ENST00000565205 USP6P35125 1406 aa18.26■□□□□ 0.51
TRAPPC2L-209ENST00000565205 EN1Q05925 392 aaPredicted RBP18.26■□□□□ 0.51
TRAPPC2L-209ENST00000565205 AKAP12Q02952 1782 aa18.26■□□□□ 0.51
TRAPPC2L-209ENST00000565205 USP47Q96K76 1375 aa18.26■□□□□ 0.51
TRAPPC2L-209ENST00000565205 PHRF1Q9P1Y6 1649 aaKnown RBP18.25■□□□□ 0.51
TRAPPC2L-209ENST00000565205 ONECUT3O60422 494 aaPredicted RBP18.25■□□□□ 0.51
TRAPPC2L-209ENST00000565205 FAM182BQ5T319 152 aa18.25■□□□□ 0.51
TRAPPC2L-209ENST00000565205 ST20-MTHFSA0A0A6YYL1 179 aa18.24■□□□□ 0.51
TRAPPC2L-209ENST00000565205 VPS72Q15906 364 aa18.24■□□□□ 0.51
TRAPPC2L-209ENST00000565205 ABTB2Q8N961 1025 aa18.24■□□□□ 0.51
TRAPPC2L-209ENST00000565205 COL14A1Q05707 1796 aaKnown RBP18.23■□□□□ 0.51
TRAPPC2L-209ENST00000565205 YY1P25490 414 aa18.23■□□□□ 0.51
TRAPPC2L-209ENST00000565205 BAG6P46379 1132 aa18.23■□□□□ 0.51
TRAPPC2L-209ENST00000565205 ZNF692Q9BU19 519 aaPredicted RBP18.23■□□□□ 0.51
TRAPPC2L-209ENST00000565205 TNS1Q9HBL0 1735 aaKnown RBP18.22■□□□□ 0.51
TRAPPC2L-209ENST00000565205 NUTM2GQ5VZR2 741 aa18.21■□□□□ 0.51
TRAPPC2L-209ENST00000565205 NLRP13Q86W25 1043 aa18.21■□□□□ 0.51
TRAPPC2L-209ENST00000565205 PUS7Q96PZ0 661 aaKnown RBP18.21■□□□□ 0.51
TRAPPC2L-209ENST00000565205 CCDC9Q9Y3X0 531 aaKnown RBP18.21■□□□□ 0.51
TRAPPC2L-209ENST00000565205 RGPD1P0DJD0 1748 aa18.2■□□□□ 0.5
TRAPPC2L-209ENST00000565205 MON2Q7Z3U7 1717 aa18.2■□□□□ 0.5
TRAPPC2L-209ENST00000565205 TESK2Q96S53 571 aa18.2■□□□□ 0.5
TRAPPC2L-209ENST00000565205 KTN1Q86UP2 1357 aaKnown RBP18.19■□□□□ 0.5
TRAPPC2L-209ENST00000565205 CPSF1Q10570 1443 aaKnown RBP18.19■□□□□ 0.5
TRAPPC2L-209ENST00000565205 NRKQ7Z2Y5 1582 aa18.19■□□□□ 0.5
TRAPPC2L-209ENST00000565205 TMC1Q8TDI8 760 aa18.19■□□□□ 0.5
TRAPPC2L-209ENST00000565205 PRDM11Q9NQV5 511 aa18.19■□□□□ 0.5
TRAPPC2L-209ENST00000565205 USP19O94966 1318 aa18.19■□□□□ 0.5
TRAPPC2L-209ENST00000565205 NINLQ9Y2I6 1382 aa18.18■□□□□ 0.5
TRAPPC2L-209ENST00000565205 NRAPQ86VF7 1730 aa18.18■□□□□ 0.5
TRAPPC2L-209ENST00000565205 SSH2Q76I76 1423 aa18.18■□□□□ 0.5
TRAPPC2L-209ENST00000565205 FAM83GA6ND36 823 aa18.18■□□□□ 0.5
TRAPPC2L-209ENST00000565205 TMF1P82094 1093 aa18.18■□□□□ 0.5
TRAPPC2L-209ENST00000565205 HDGFL2Q7Z4V5 671 aaPredicted RBP18.18■□□□□ 0.5
TRAPPC2L-209ENST00000565205 PIK3C2AO00443 1686 aa18.18■□□□□ 0.5
TRAPPC2L-209ENST00000565205 TTC21AQ8NDW8 1320 aa18.18■□□□□ 0.5
TRAPPC2L-209ENST00000565205 A0A0G2JS52 829 aa18.17■□□□□ 0.5
TRAPPC2L-209ENST00000565205 MYT1Q01538 1121 aa18.17■□□□□ 0.5
TRAPPC2L-209ENST00000565205 FAM98CQ17RN3 349 aaKnown RBP18.17■□□□□ 0.5
TRAPPC2L-209ENST00000565205 KIAA0232Q92628 1395 aa18.17■□□□□ 0.5
TRAPPC2L-209ENST00000565205 NLRP6P59044 892 aa18.16■□□□□ 0.5
TRAPPC2L-209ENST00000565205 EZH2Q15910 746 aaKnown RBP18.16■□□□□ 0.5
TRAPPC2L-209ENST00000565205 TERF2IPQ9NYB0 399 aa18.16■□□□□ 0.5
TRAPPC2L-209ENST00000565205 TTC21BQ7Z4L5 1316 aa18.16■□□□□ 0.5
TRAPPC2L-209ENST00000565205 CDCA8Q53HL2 280 aa18.15■□□□□ 0.5
TRAPPC2L-209ENST00000565205 BTG4Q9NY30 223 aa18.15■□□□□ 0.5
TRAPPC2L-209ENST00000565205 SLIT3O75094 1523 aa18.14■□□□□ 0.49
TRAPPC2L-209ENST00000565205 ZC3H6P61129 1189 aaKnown RBP18.14■□□□□ 0.49
TRAPPC2L-209ENST00000565205 SLC12A5Q9H2X9 1139 aa18.13■□□□□ 0.49
TRAPPC2L-209ENST00000565205 CPDO75976 1380 aa18.13■□□□□ 0.49
TRAPPC2L-209ENST00000565205 CD163L1Q9NR16 1453 aa18.13■□□□□ 0.49
TRAPPC2L-209ENST00000565205 GCP02774 474 aa18.12■□□□□ 0.49
TRAPPC2L-209ENST00000565205 EDC4Q6P2E9 1401 aaKnown RBP18.12■□□□□ 0.49
TRAPPC2L-209ENST00000565205 CAMTA1Q9Y6Y1 1673 aa18.12■□□□□ 0.49
TRAPPC2L-209ENST00000565205 CHRNA2Q15822 529 aa18.11■□□□□ 0.49
TRAPPC2L-209ENST00000565205 A0A1W2PP64 1363 aa18.11■□□□□ 0.49
TRAPPC2L-209ENST00000565205 DISP2A7MBM2 1401 aa18.11■□□□□ 0.49
TRAPPC2L-209ENST00000565205 KCNH5Q8NCM2 988 aa18.1■□□□□ 0.49
TRAPPC2L-209ENST00000565205 CAMKK2Q96RR4 588 aa18.1■□□□□ 0.49
TRAPPC2L-209ENST00000565205 USP54Q70EL1 1684 aa18.09■□□□□ 0.49
TRAPPC2L-209ENST00000565205 THSD7AQ9UPZ6 1657 aa18.09■□□□□ 0.49
TRAPPC2L-209ENST00000565205 EIF4G2P78344 907 aaKnown RBP eCLIP18.09■□□□□ 0.49
TRAPPC2L-209ENST00000565205 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.09■□□□□ 0.49
TRAPPC2L-209ENST00000565205 LMO7Q8WWI1 1683 aa18.09■□□□□ 0.49
TRAPPC2L-209ENST00000565205 ANKRD36BQ8N2N9 1353 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms