RNA–Protein interactions for RNA: ENST00000565143.1

PKM-214, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 2,301 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-214ENST00000565143 ZKSCAN2Q63HK3 967 aa16.37■□□□□ 0.21
PKM-214ENST00000565143 RWDD1Q9H446 243 aaPredicted RBP16.37■□□□□ 0.21
PKM-214ENST00000565143 IL16Q14005 1332 aa16.37■□□□□ 0.21
PKM-214ENST00000565143 NLRP1Q9C000 1473 aa16.37■□□□□ 0.21
PKM-214ENST00000565143 TMPOP42166 694 aaKnown RBP16.37■□□□□ 0.21
PKM-214ENST00000565143 REREQ9P2R6 1566 aa16.36■□□□□ 0.21
PKM-214ENST00000565143 ARHGEF40Q8TER5 1519 aa16.36■□□□□ 0.21
PKM-214ENST00000565143 MVPQ14764 893 aaKnown RBP16.36■□□□□ 0.21
PKM-214ENST00000565143 BCL2L13Q9BXK5 485 aa16.36■□□□□ 0.21
PKM-214ENST00000565143 PCDHB15Q9Y5E8 787 aa16.36■□□□□ 0.21
PKM-214ENST00000565143 DLC1Q96QB1 1528 aa16.35■□□□□ 0.21
PKM-214ENST00000565143 PNPLA6Q8IY17 1366 aa16.35■□□□□ 0.21
PKM-214ENST00000565143 CDK19Q9BWU1 502 aa16.35■□□□□ 0.21
PKM-214ENST00000565143 STAG3Q9UJ98 1225 aa16.35■□□□□ 0.21
PKM-214ENST00000565143 KIF20BQ96Q89 1820 aa16.34■□□□□ 0.21
PKM-214ENST00000565143 DIAPH1O60610 1272 aaKnown RBP16.34■□□□□ 0.21
PKM-214ENST00000565143 FBXO31Q5XUX0 539 aaPredicted RBP16.34■□□□□ 0.21
PKM-214ENST00000565143 DZIP1LQ8IYY4 767 aaKnown RBP16.34■□□□□ 0.21
PKM-214ENST00000565143 AGLP35573 1532 aa16.34■□□□□ 0.21
PKM-214ENST00000565143 SLC4A3P48751 1232 aa16.34■□□□□ 0.21
PKM-214ENST00000565143 FTSJ3Q8IY81 847 aaKnown RBP16.34■□□□□ 0.21
PKM-214ENST00000565143 TRIM35Q9UPQ4 493 aa16.34■□□□□ 0.21
PKM-214ENST00000565143 TNNQ9UQP3 1299 aa16.34■□□□□ 0.21
PKM-214ENST00000565143 DIP2BQ9P265 1576 aa16.33■□□□□ 0.2
PKM-214ENST00000565143 EXOSC9Q06265 439 aaKnown RBP16.32■□□□□ 0.2
PKM-214ENST00000565143 FAM69CQ0P6D2 419 aa16.32■□□□□ 0.2
PKM-214ENST00000565143 USP19O94966 1318 aa16.32■□□□□ 0.2
PKM-214ENST00000565143 NFKBIBQ15653 356 aa16.31■□□□□ 0.2
PKM-214ENST00000565143 TSR2Q969E8 191 aaKnown RBP16.31■□□□□ 0.2
PKM-214ENST00000565143 SMC4Q9NTJ3 1288 aa16.31■□□□□ 0.2
PKM-214ENST00000565143 PDZRN3Q9UPQ7 1066 aa16.31■□□□□ 0.2
PKM-214ENST00000565143 CDC42BPGQ6DT37 1551 aa16.31■□□□□ 0.2
PKM-214ENST00000565143 SENP3Q9H4L4 574 aaPredicted RBP16.31■□□□□ 0.2
PKM-214ENST00000565143 CABP1Q9NZU7 370 aa16.31■□□□□ 0.2
PKM-214ENST00000565143 ATP7BP35670 1465 aa16.31■□□□□ 0.2
PKM-214ENST00000565143 FCHSD2O94868 740 aa16.3■□□□□ 0.2
PKM-214ENST00000565143 RIPK4P57078 832 aa16.3■□□□□ 0.2
PKM-214ENST00000565143 DDX19BQ9UMR2 479 aa16.29■□□□□ 0.2
PKM-214ENST00000565143 SPATA31D1Q6ZQQ2 1576 aa16.29■□□□□ 0.2
PKM-214ENST00000565143 A2ML1A8K2U0 1454 aa16.29■□□□□ 0.2
PKM-214ENST00000565143 UPF2Q9HAU5 1272 aaKnown RBP16.29■□□□□ 0.2
PKM-214ENST00000565143 KIF13AQ9H1H9 1805 aa16.29■□□□□ 0.2
PKM-214ENST00000565143 BECN1Q14457 450 aa16.28■□□□□ 0.2
PKM-214ENST00000565143 ATF7IPQ6VMQ6 1270 aa16.28■□□□□ 0.2
PKM-214ENST00000565143 SSH1Q8WYL5 1049 aa16.28■□□□□ 0.2
PKM-214ENST00000565143 RIMS2Q9UQ26 1411 aa16.28■□□□□ 0.2
PKM-214ENST00000565143 TRIM27P14373 513 aa16.27■□□□□ 0.2
PKM-214ENST00000565143 IPO8O15397 1037 aaKnown RBP16.27■□□□□ 0.19
PKM-214ENST00000565143 HDAC1Q13547 482 aaPredicted RBP16.27■□□□□ 0.19
PKM-214ENST00000565143 KIF16BQ96L93 1317 aa16.26■□□□□ 0.19
PKM-214ENST00000565143 SETD1AO15047 1707 aaKnown RBP16.26■□□□□ 0.19
PKM-214ENST00000565143 SEC24BO95487 1268 aa16.26■□□□□ 0.19
PKM-214ENST00000565143 TSPOAP1O95153 1857 aa16.25■□□□□ 0.19
PKM-214ENST00000565143 ALDH1L2Q3SY69 923 aa16.25■□□□□ 0.19
PKM-214ENST00000565143 ZNF428Q96B54 188 aa16.25■□□□□ 0.19
PKM-214ENST00000565143 FAM135BQ49AJ0 1406 aa16.25■□□□□ 0.19
PKM-214ENST00000565143 LRRC7Q96NW7 1537 aa16.24■□□□□ 0.19
PKM-214ENST00000565143 ITPRIPQ8IWB1 547 aa16.24■□□□□ 0.19
PKM-214ENST00000565143 POLKQ9UBT6 870 aa16.24■□□□□ 0.19
PKM-214ENST00000565143 NOB1Q9ULX3 412 aaKnown RBP16.24■□□□□ 0.19
PKM-214ENST00000565143 RSPH6AQ9H0K4 717 aa16.23■□□□□ 0.19
PKM-214ENST00000565143 CALD1Q05682 793 aaKnown RBP16.23■□□□□ 0.19
PKM-214ENST00000565143 GSE1Q14687 1217 aa16.23■□□□□ 0.19
PKM-214ENST00000565143 WAPLQ7Z5K2 1190 aa16.23■□□□□ 0.19
PKM-214ENST00000565143 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.23■□□□□ 0.19
PKM-214ENST00000565143 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.23■□□□□ 0.19
PKM-214ENST00000565143 EDC4Q6P2E9 1401 aaKnown RBP16.23■□□□□ 0.19
PKM-214ENST00000565143 PPIP5K1Q6PFW1 1433 aa16.22■□□□□ 0.19
PKM-214ENST00000565143 TBC1D32Q96NH3 1257 aa16.22■□□□□ 0.19
PKM-214ENST00000565143 PRKAR2BP31323 418 aa16.22■□□□□ 0.19
PKM-214ENST00000565143 BRPF1P55201 1214 aaPredicted RBP16.22■□□□□ 0.19
PKM-214ENST00000565143 CPSF1Q10570 1443 aaKnown RBP16.21■□□□□ 0.19
PKM-214ENST00000565143 MAP2P11137 1827 aaKnown RBP16.21■□□□□ 0.19
PKM-214ENST00000565143 WASLO00401 505 aaPredicted RBP16.2■□□□□ 0.18
PKM-214ENST00000565143 NFE2L2Q16236 605 aa16.2■□□□□ 0.18
PKM-214ENST00000565143 TMEM57Q8N5G2 664 aa16.2■□□□□ 0.18
PKM-214ENST00000565143 SMC5Q8IY18 1101 aa16.19■□□□□ 0.18
PKM-214ENST00000565143 SIRT1Q96EB6 747 aa16.19■□□□□ 0.18
PKM-214ENST00000565143 ZBTB40Q9NUA8 1239 aa16.19■□□□□ 0.18
PKM-214ENST00000565143 AATKQ6ZMQ8 1374 aa16.19■□□□□ 0.18
PKM-214ENST00000565143 CHMP4BQ9H444 224 aaKnown RBP16.19■□□□□ 0.18
PKM-214ENST00000565143 CDK12Q9NYV4 1490 aaPredicted RBP16.19■□□□□ 0.18
PKM-214ENST00000565143 NRXN3Q9Y4C0 1643 aa16.19■□□□□ 0.18
PKM-214ENST00000565143 HDGFP51858 240 aaKnown RBP16.18■□□□□ 0.18
PKM-214ENST00000565143 KNDC1Q76NI1 1749 aa16.17■□□□□ 0.18
PKM-214ENST00000565143 FRAT2O75474 233 aaPredicted RBP16.17■□□□□ 0.18
PKM-214ENST00000565143 IL13P35225 146 aa16.16■□□□□ 0.18
PKM-214ENST00000565143 GNAI1P63096 354 aa16.16■□□□□ 0.18
PKM-214ENST00000565143 ARHGAP45Q92619 1136 aa16.16■□□□□ 0.18
PKM-214ENST00000565143 IFT57Q9NWB7 429 aa16.16■□□□□ 0.18
PKM-214ENST00000565143 LMOD3Q0VAK6 560 aa16.16■□□□□ 0.18
PKM-214ENST00000565143 TECPR2O15040 1411 aa16.15■□□□□ 0.18
PKM-214ENST00000565143 METP08581 1390 aa16.15■□□□□ 0.18
PKM-214ENST00000565143 PHACTR3Q96KR7 559 aa16.14■□□□□ 0.18
PKM-214ENST00000565143 MON2Q7Z3U7 1717 aa16.14■□□□□ 0.17
PKM-214ENST00000565143 HMOX1P09601 288 aa16.14■□□□□ 0.17
PKM-214ENST00000565143 FBLN1P23142 703 aa16.14■□□□□ 0.17
PKM-214ENST00000565143 MLECQ14165 292 aa16.14■□□□□ 0.17
PKM-214ENST00000565143 NUDT16Q96DE0 195 aaKnown RBP16.14■□□□□ 0.17
PKM-214ENST00000565143 COG3Q96JB2 828 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms