RNA–Protein interactions for RNA: ENST00000565124.4

TCF4-227, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 555 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-227ENST00000565124 PTPRUQ92729 1446 aa10.58□□□□□ -0.72
TCF4-227ENST00000565124 SIRT1Q96EB6 747 aa10.57□□□□□ -0.72
TCF4-227ENST00000565124 PRAM1Q96QH2 718 aa10.57□□□□□ -0.72
TCF4-227ENST00000565124 POGKQ9P215 609 aa10.57□□□□□ -0.72
TCF4-227ENST00000565124 TBX22Q9Y458 520 aa10.57□□□□□ -0.72
TCF4-227ENST00000565124 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.57□□□□□ -0.72
TCF4-227ENST00000565124 EVC2Q86UK5 1308 aa10.57□□□□□ -0.72
TCF4-227ENST00000565124 ITSN1Q15811 1721 aa10.56□□□□□ -0.72
TCF4-227ENST00000565124 KDM4FA0A1W2PPD8 638 aa10.56□□□□□ -0.72
TCF4-227ENST00000565124 PSEN1P49768 467 aa10.56□□□□□ -0.72
TCF4-227ENST00000565124 FXR2P51116 673 aaKnown RBP eCLIP10.56□□□□□ -0.72
TCF4-227ENST00000565124 PUS7Q96PZ0 661 aaKnown RBP10.56□□□□□ -0.72
TCF4-227ENST00000565124 TOPAZ1Q8N9V7 1692 aa10.56□□□□□ -0.72
TCF4-227ENST00000565124 LMTK3Q96Q04 1460 aa10.55□□□□□ -0.72
TCF4-227ENST00000565124 PLEKHH1Q9ULM0 1364 aa10.55□□□□□ -0.72
TCF4-227ENST00000565124 NINLQ9Y2I6 1382 aa10.55□□□□□ -0.72
TCF4-227ENST00000565124 ATAD2Q6PL18 1390 aa10.54□□□□□ -0.72
TCF4-227ENST00000565124 ROBO2Q9HCK4 1378 aa10.54□□□□□ -0.72
TCF4-227ENST00000565124 PAK3O75914 559 aaPredicted RBP10.54□□□□□ -0.72
TCF4-227ENST00000565124 NALCNQ8IZF0 1738 aa10.54□□□□□ -0.72
TCF4-227ENST00000565124 SLC26A8Q96RN1 970 aa10.54□□□□□ -0.72
TCF4-227ENST00000565124 MINK1Q8N4C8 1332 aaPredicted RBP10.54□□□□□ -0.72
TCF4-227ENST00000565124 KTN1Q86UP2 1357 aaKnown RBP10.53□□□□□ -0.72
TCF4-227ENST00000565124 ANKRD26Q9UPS8 1709 aa10.53□□□□□ -0.72
TCF4-227ENST00000565124 AKAP12Q02952 1782 aa10.53□□□□□ -0.72
TCF4-227ENST00000565124 STRCQ7RTU9 1775 aa10.53□□□□□ -0.72
TCF4-227ENST00000565124 CCER2I3L3R5 266 aa10.53□□□□□ -0.72
TCF4-227ENST00000565124 SAFB2Q14151 953 aaKnown RBP eCLIP10.53□□□□□ -0.72
TCF4-227ENST00000565124 KIF20BQ96Q89 1820 aa10.53□□□□□ -0.72
TCF4-227ENST00000565124 FMN2Q9NZ56 1722 aa10.53□□□□□ -0.72
TCF4-227ENST00000565124 ZNF579Q8NAF0 562 aaKnown RBP10.52□□□□□ -0.73
TCF4-227ENST00000565124 MON2Q7Z3U7 1717 aa10.52□□□□□ -0.73
TCF4-227ENST00000565124 CDC42BPGQ6DT37 1551 aa10.52□□□□□ -0.73
TCF4-227ENST00000565124 NKTRP30414 1462 aaKnown RBP10.51□□□□□ -0.73
TCF4-227ENST00000565124 ATP7BP35670 1465 aa10.51□□□□□ -0.73
TCF4-227ENST00000565124 CHRDL2Q6WN34 429 aa10.51□□□□□ -0.73
TCF4-227ENST00000565124 WAPLQ7Z5K2 1190 aa10.51□□□□□ -0.73
TCF4-227ENST00000565124 PRKRIP1Q9H875 184 aaPredicted RBP10.51□□□□□ -0.73
TCF4-227ENST00000565124 PANK3Q9H999 370 aa10.51□□□□□ -0.73
TCF4-227ENST00000565124 AMOTL2Q9Y2J4 779 aa10.51□□□□□ -0.73
TCF4-227ENST00000565124 MAP3K13O43283 966 aa10.5□□□□□ -0.73
TCF4-227ENST00000565124 IFNL1Q8IU54 200 aa10.5□□□□□ -0.73
TCF4-227ENST00000565124 PIP4P2Q8N4L2 257 aa10.5□□□□□ -0.73
TCF4-227ENST00000565124 ANKRD36BQ8N2N9 1353 aa10.5□□□□□ -0.73
TCF4-227ENST00000565124 NPC1L1Q9UHC9 1359 aa10.5□□□□□ -0.73
TCF4-227ENST00000565124 STRCP1A6NGW2 1772 aa10.49□□□□□ -0.73
TCF4-227ENST00000565124 RGPD8O14715 1765 aaPredicted RBP10.49□□□□□ -0.73
TCF4-227ENST00000565124 SRPK2P78362 688 aaKnown RBP10.49□□□□□ -0.73
TCF4-227ENST00000565124 CADPS2Q86UW7 1296 aa10.49□□□□□ -0.73
TCF4-227ENST00000565124 CABP2Q9NPB3 220 aa10.49□□□□□ -0.73
TCF4-227ENST00000565124 NCKAP5LQ9HCH0 1330 aa10.49□□□□□ -0.73
TCF4-227ENST00000565124 PARD3Q8TEW0 1356 aa10.49□□□□□ -0.73
TCF4-227ENST00000565124 PER1O15534 1290 aaPredicted RBP10.48□□□□□ -0.73
TCF4-227ENST00000565124 CDK19Q9BWU1 502 aa10.48□□□□□ -0.73
TCF4-227ENST00000565124 NSD3Q9BZ95 1437 aa10.48□□□□□ -0.73
TCF4-227ENST00000565124 WASLO00401 505 aaPredicted RBP10.47□□□□□ -0.73
TCF4-227ENST00000565124 KCNA6P17658 529 aa10.47□□□□□ -0.73
TCF4-227ENST00000565124 RALBP1Q15311 655 aa10.47□□□□□ -0.73
TCF4-227ENST00000565124 TMC1Q8TDI8 760 aa10.47□□□□□ -0.73
TCF4-227ENST00000565124 MFRPQ9BY79 579 aa10.47□□□□□ -0.73
TCF4-227ENST00000565124 KNSTRNQ9Y448 316 aa10.47□□□□□ -0.73
TCF4-227ENST00000565124 ADGRL3Q9HAR2 1447 aa10.47□□□□□ -0.73
TCF4-227ENST00000565124 CD163L1Q9NR16 1453 aa10.47□□□□□ -0.73
TCF4-227ENST00000565124 NRKQ7Z2Y5 1582 aa10.47□□□□□ -0.73
TCF4-227ENST00000565124 A0A1W2PP64 1363 aa10.46□□□□□ -0.74
TCF4-227ENST00000565124 ANKARQ7Z5J8 1434 aa10.46□□□□□ -0.74
TCF4-227ENST00000565124 PPIP5K1Q6PFW1 1433 aa10.45□□□□□ -0.74
TCF4-227ENST00000565124 NSD2O96028 1365 aa10.45□□□□□ -0.74
TCF4-227ENST00000565124 MYBBP1AQ9BQG0 1328 aaKnown RBP10.45□□□□□ -0.74
TCF4-227ENST00000565124 EFCAB3Q8N7B9 438 aa10.45□□□□□ -0.74
TCF4-227ENST00000565124 KIF12Q96FN5 646 aa10.45□□□□□ -0.74
TCF4-227ENST00000565124 XIRP1Q702N8 1843 aaKnown RBP10.44□□□□□ -0.74
TCF4-227ENST00000565124 HSPA2P54652 639 aa10.44□□□□□ -0.74
TCF4-227ENST00000565124 SLC12A5Q9H2X9 1139 aa10.44□□□□□ -0.74
TCF4-227ENST00000565124 WDR70Q9NW82 654 aa10.44□□□□□ -0.74
TCF4-227ENST00000565124 ZRANB1Q9UGI0 708 aa10.44□□□□□ -0.74
TCF4-227ENST00000565124 BRD4O60885 1362 aaPredicted RBP10.43□□□□□ -0.74
TCF4-227ENST00000565124 HDGFL2Q7Z4V5 671 aaPredicted RBP10.43□□□□□ -0.74
TCF4-227ENST00000565124 TERF2IPQ9NYB0 399 aa10.43□□□□□ -0.74
TCF4-227ENST00000565124 CPSF1Q10570 1443 aaKnown RBP10.42□□□□□ -0.74
TCF4-227ENST00000565124 CGNL1Q0VF96 1302 aa10.42□□□□□ -0.74
TCF4-227ENST00000565124 PRR36Q9H6K5 1346 aa10.42□□□□□ -0.74
TCF4-227ENST00000565124 CC2D1BQ5T0F9 858 aaKnown RBP10.42□□□□□ -0.74
TCF4-227ENST00000565124 NUDT16Q96DE0 195 aaKnown RBP10.42□□□□□ -0.74
TCF4-227ENST00000565124 CARD14Q9BXL6 1004 aa10.42□□□□□ -0.74
TCF4-227ENST00000565124 EDC4Q6P2E9 1401 aaKnown RBP10.41□□□□□ -0.74
TCF4-227ENST00000565124 KIF1AQ12756 1690 aa10.41□□□□□ -0.74
TCF4-227ENST00000565124 PPP1R37O75864 691 aa10.41□□□□□ -0.74
TCF4-227ENST00000565124 CNGB1Q14028 1251 aaPredicted RBP10.41□□□□□ -0.74
TCF4-227ENST00000565124 NLRP13Q86W25 1043 aa10.41□□□□□ -0.74
TCF4-227ENST00000565124 PHF12Q96QT6 1004 aa10.41□□□□□ -0.74
TCF4-227ENST00000565124 MRS2Q9HD23 443 aa10.41□□□□□ -0.74
TCF4-227ENST00000565124 PHF8Q9UPP1 1060 aa10.41□□□□□ -0.74
TCF4-227ENST00000565124 NCOA3Q9Y6Q9 1424 aa10.41□□□□□ -0.74
TCF4-227ENST00000565124 USP54Q70EL1 1684 aa10.41□□□□□ -0.74
TCF4-227ENST00000565124 CD44P16070 742 aaKnown RBP10.4□□□□□ -0.74
TCF4-227ENST00000565124 CABP1Q9NZU7 370 aa10.4□□□□□ -0.74
TCF4-227ENST00000565124 DCCP43146 1447 aa10.4□□□□□ -0.75
TCF4-227ENST00000565124 KCNV2Q8TDN2 545 aa10.39□□□□□ -0.75
TCF4-227ENST00000565124 MAP2P11137 1827 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms