RNA–Protein interactions for RNA: ENST00000565034.1

NIP7-206, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 3

Gene NIP7, Length 639 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-206ENST00000565034 COL3A1P02461 1466 aaPredicted RBP19.51■□□□□ 0.71
NIP7-206ENST00000565034 MAP2P11137 1827 aaKnown RBP19.51■□□□□ 0.71
NIP7-206ENST00000565034 NCOA3Q9Y6Q9 1424 aa19.51■□□□□ 0.71
NIP7-206ENST00000565034 NUTM2FA1L443 756 aa19.5■□□□□ 0.71
NIP7-206ENST00000565034 NME9Q86XW9 330 aa19.5■□□□□ 0.71
NIP7-206ENST00000565034 NGEFQ8N5V2 710 aa19.5■□□□□ 0.71
NIP7-206ENST00000565034 COG3Q96JB2 828 aa19.5■□□□□ 0.71
NIP7-206ENST00000565034 STRCQ7RTU9 1775 aa19.49■□□□□ 0.71
NIP7-206ENST00000565034 USP54Q70EL1 1684 aa19.49■□□□□ 0.71
NIP7-206ENST00000565034 OVOS2A0A0J9YW53 1432 aa19.49■□□□□ 0.71
NIP7-206ENST00000565034 OVOS2Q6IE36 1432 aa19.49■□□□□ 0.71
NIP7-206ENST00000565034 PNPLA6Q8IY17 1366 aa19.48■□□□□ 0.71
NIP7-206ENST00000565034 STRCP1A6NGW2 1772 aa19.48■□□□□ 0.71
NIP7-206ENST00000565034 NGDNQ8NEJ9 315 aaKnown RBP19.48■□□□□ 0.71
NIP7-206ENST00000565034 LRRC7Q96NW7 1537 aa19.47■□□□□ 0.71
NIP7-206ENST00000565034 PROSER2Q86WR7 435 aaPredicted RBP19.47■□□□□ 0.71
NIP7-206ENST00000565034 NUDCQ9Y266 331 aa19.47■□□□□ 0.71
NIP7-206ENST00000565034 CDK12Q9NYV4 1490 aaPredicted RBP19.47■□□□□ 0.71
NIP7-206ENST00000565034 HSPA2P54652 639 aa19.46■□□□□ 0.71
NIP7-206ENST00000565034 KIF1AQ12756 1690 aa19.46■□□□□ 0.71
NIP7-206ENST00000565034 C14orf37Q86TY3 774 aa19.45■□□□□ 0.7
NIP7-206ENST00000565034 PMFBP1Q8TBY8 1022 aa19.45■□□□□ 0.7
NIP7-206ENST00000565034 USP31Q70CQ4 1352 aa19.44■□□□□ 0.7
NIP7-206ENST00000565034 DCCP43146 1447 aa19.44■□□□□ 0.7
NIP7-206ENST00000565034 PIK3C2AO00443 1686 aa19.44■□□□□ 0.7
NIP7-206ENST00000565034 POLKQ9UBT6 870 aa19.43■□□□□ 0.7
NIP7-206ENST00000565034 PHF8Q9UPP1 1060 aa19.43■□□□□ 0.7
NIP7-206ENST00000565034 NEFLP07196 543 aa19.42■□□□□ 0.7
NIP7-206ENST00000565034 IQSEC2Q5JU85 1478 aa19.41■□□□□ 0.7
NIP7-206ENST00000565034 RUNDC1Q96C34 613 aa19.41■□□□□ 0.7
NIP7-206ENST00000565034 C19orf44Q9H6X5 657 aa19.41■□□□□ 0.7
NIP7-206ENST00000565034 DIAPH1O60610 1272 aaKnown RBP19.4■□□□□ 0.7
NIP7-206ENST00000565034 NCBP3Q53F19 620 aaKnown RBP19.4■□□□□ 0.7
NIP7-206ENST00000565034 ZRANB1Q9UGI0 708 aa19.4■□□□□ 0.7
NIP7-206ENST00000565034 CCDC146Q8IYE0 955 aa19.39■□□□□ 0.69
NIP7-206ENST00000565034 RBM33Q96EV2 1170 aaKnown RBP19.39■□□□□ 0.69
NIP7-206ENST00000565034 TMEM94Q12767 1356 aa19.39■□□□□ 0.69
NIP7-206ENST00000565034 MARF1Q9Y4F3 1742 aaKnown RBP19.39■□□□□ 0.69
NIP7-206ENST00000565034 U2AF1L5P0DN76 240 aaPredicted RBP19.38■□□□□ 0.69
NIP7-206ENST00000565034 U2AF1Q01081 240 aaKnown RBP eCLIP19.38■□□□□ 0.69
NIP7-206ENST00000565034 ZNF521Q96K83 1311 aa19.38■□□□□ 0.69
NIP7-206ENST00000565034 PNNQ9H307 717 aaKnown RBP19.38■□□□□ 0.69
NIP7-206ENST00000565034 SALL2Q9Y467 1007 aaPredicted RBP19.37■□□□□ 0.69
NIP7-206ENST00000565034 C1orf167Q5SNV9 1468 aa19.36■□□□□ 0.69
NIP7-206ENST00000565034 APAF1O14727 1248 aa19.36■□□□□ 0.69
NIP7-206ENST00000565034 XIRP1Q702N8 1843 aaKnown RBP19.36■□□□□ 0.69
NIP7-206ENST00000565034 SENP3-EIF4A1A0A087X0R7 540 aa19.35■□□□□ 0.69
NIP7-206ENST00000565034 ESCO1Q5FWF5 840 aa19.35■□□□□ 0.69
NIP7-206ENST00000565034 SUPT16HQ9Y5B9 1047 aaKnown RBP19.35■□□□□ 0.69
NIP7-206ENST00000565034 U2SURPO15042 1029 aaKnown RBP19.34■□□□□ 0.69
NIP7-206ENST00000565034 EMILIN1Q9Y6C2 1016 aa19.34■□□□□ 0.69
NIP7-206ENST00000565034 MST1RQ04912 1400 aa19.34■□□□□ 0.69
NIP7-206ENST00000565034 ATF3P18847 181 aa19.33■□□□□ 0.68
NIP7-206ENST00000565034 GOLGA2Q08379 1002 aa19.33■□□□□ 0.68
NIP7-206ENST00000565034 PEAK1Q9H792 1746 aa19.33■□□□□ 0.68
NIP7-206ENST00000565034 MSH6P52701 1360 aa19.32■□□□□ 0.68
NIP7-206ENST00000565034 KIF24Q5T7B8 1368 aa19.32■□□□□ 0.68
NIP7-206ENST00000565034 TRPM3Q9HCF6 1732 aaPredicted RBP19.32■□□□□ 0.68
NIP7-206ENST00000565034 PPM1GO15355 546 aaPredicted RBP19.32■□□□□ 0.68
NIP7-206ENST00000565034 PSME1Q06323 249 aa19.31■□□□□ 0.68
NIP7-206ENST00000565034 CCDC27Q2M243 656 aa19.31■□□□□ 0.68
NIP7-206ENST00000565034 CADPS2Q86UW7 1296 aa19.31■□□□□ 0.68
NIP7-206ENST00000565034 TCP11L2Q8N4U5 519 aa19.31■□□□□ 0.68
NIP7-206ENST00000565034 FCHSD2O94868 740 aa19.3■□□□□ 0.68
NIP7-206ENST00000565034 FBLN1P23142 703 aa19.3■□□□□ 0.68
NIP7-206ENST00000565034 IL13P35225 146 aa19.3■□□□□ 0.68
NIP7-206ENST00000565034 NLRP6P59044 892 aa19.3■□□□□ 0.68
NIP7-206ENST00000565034 RRS1Q15050 365 aaKnown RBP19.3■□□□□ 0.68
NIP7-206ENST00000565034 DMRT2Q9Y5R5 561 aa19.3■□□□□ 0.68
NIP7-206ENST00000565034 SBNO1A3KN83 1393 aa19.3■□□□□ 0.68
NIP7-206ENST00000565034 MAPK8IP3Q9UPT6 1336 aa19.29■□□□□ 0.68
NIP7-206ENST00000565034 FKBP8Q14318 412 aa19.29■□□□□ 0.68
NIP7-206ENST00000565034 PLEKHF1Q96S99 279 aa19.29■□□□□ 0.68
NIP7-206ENST00000565034 PHF23Q9BUL5 403 aaPredicted RBP19.29■□□□□ 0.68
NIP7-206ENST00000565034 RNF123Q5XPI4 1314 aa19.28■□□□□ 0.68
NIP7-206ENST00000565034 ERICH6BQ5W0A0 696 aa19.28■□□□□ 0.68
NIP7-206ENST00000565034 ABTB2Q8N961 1025 aa19.28■□□□□ 0.68
NIP7-206ENST00000565034 CDCA7LQ96GN5 454 aa19.28■□□□□ 0.68
NIP7-206ENST00000565034 ORAI2Q96SN7 254 aa19.28■□□□□ 0.68
NIP7-206ENST00000565034 FLT4P35916 1363 aa19.28■□□□□ 0.68
NIP7-206ENST00000565034 RGPD1P0DJD0 1748 aa19.28■□□□□ 0.68
NIP7-206ENST00000565034 PAK3O75914 559 aaPredicted RBP19.27■□□□□ 0.68
NIP7-206ENST00000565034 NEFMP07197 916 aa19.27■□□□□ 0.68
NIP7-206ENST00000565034 SLFN5Q08AF3 891 aa19.27■□□□□ 0.68
NIP7-206ENST00000565034 PHRF1Q9P1Y6 1649 aaKnown RBP19.26■□□□□ 0.67
NIP7-206ENST00000565034 E9PSI1 815 aa19.26■□□□□ 0.67
NIP7-206ENST00000565034 WWC1Q8IX03 1113 aa19.26■□□□□ 0.67
NIP7-206ENST00000565034 MAP3K19Q56UN5 1328 aa19.25■□□□□ 0.67
NIP7-206ENST00000565034 ALS2Q96Q42 1657 aa19.25■□□□□ 0.67
NIP7-206ENST00000565034 RTL1A6NKG5 1358 aa19.25■□□□□ 0.67
NIP7-206ENST00000565034 WDR63Q8IWG1 891 aa19.25■□□□□ 0.67
NIP7-206ENST00000565034 TRMT2AQ8IZ69 625 aaKnown RBP19.25■□□□□ 0.67
NIP7-206ENST00000565034 RSPH6AQ9H0K4 717 aa19.25■□□□□ 0.67
NIP7-206ENST00000565034 SLIT3O75094 1523 aa19.25■□□□□ 0.67
NIP7-206ENST00000565034 NFAT5O94916 1531 aa19.25■□□□□ 0.67
NIP7-206ENST00000565034 LTN1O94822 1766 aa19.24■□□□□ 0.67
NIP7-206ENST00000565034 DUSP27Q5VZP5 1158 aa19.24■□□□□ 0.67
NIP7-206ENST00000565034 RCAN3Q9UKA8 241 aa19.24■□□□□ 0.67
NIP7-206ENST00000565034 ZNF335Q9H4Z2 1342 aaPredicted RBP19.23■□□□□ 0.67
NIP7-206ENST00000565034 FOXO3O43524 673 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms