RNA–Protein interactions for RNA: ENST00000564440.5

PKM-212, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 3,016 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-212ENST00000564440 GOLGB1Q14789 3259 aaKnown RBP12.33□□□□□ -0.44
PKM-212ENST00000564440 PPM1GO15355 546 aaPredicted RBP12.33□□□□□ -0.44
PKM-212ENST00000564440 KNSTRNQ9Y448 316 aa12.33□□□□□ -0.44
PKM-212ENST00000564440 PHLPP1O60346 1717 aa12.33□□□□□ -0.44
PKM-212ENST00000564440 C1orf167Q5SNV9 1468 aa12.33□□□□□ -0.44
PKM-212ENST00000564440 B4GALNT3Q6L9W6 998 aa12.32□□□□□ -0.44
PKM-212ENST00000564440 NINLQ9Y2I6 1382 aa12.32□□□□□ -0.44
PKM-212ENST00000564440 NEUROD2Q15784 382 aa12.32□□□□□ -0.44
PKM-212ENST00000564440 ABCC6O95255 1503 aa12.32□□□□□ -0.44
PKM-212ENST00000564440 MSH6P52701 1360 aa12.32□□□□□ -0.44
PKM-212ENST00000564440 ANKRD26Q9UPS8 1709 aa12.32□□□□□ -0.44
PKM-212ENST00000564440 PXDNQ92626 1479 aa12.31□□□□□ -0.44
PKM-212ENST00000564440 GGNBP2Q9H3C7 697 aa12.31□□□□□ -0.44
PKM-212ENST00000564440 C19orf44Q9H6X5 657 aa12.31□□□□□ -0.44
PKM-212ENST00000564440 ZRANB1Q9UGI0 708 aa12.3□□□□□ -0.44
PKM-212ENST00000564440 POLR3AO14802 1390 aaPredicted RBP12.3□□□□□ -0.44
PKM-212ENST00000564440 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.29□□□□□ -0.44
PKM-212ENST00000564440 FBXO41Q8TF61 875 aa12.28□□□□□ -0.44
PKM-212ENST00000564440 CABP1Q9NZU7 370 aa12.28□□□□□ -0.44
PKM-212ENST00000564440 NOP58Q9Y2X3 529 aaKnown RBP12.28□□□□□ -0.44
PKM-212ENST00000564440 NUTM2GQ5VZR2 741 aa12.27□□□□□ -0.44
PKM-212ENST00000564440 CDCA7LQ96GN5 454 aa12.27□□□□□ -0.44
PKM-212ENST00000564440 SSH2Q76I76 1423 aa12.27□□□□□ -0.44
PKM-212ENST00000564440 PMFBP1Q8TBY8 1022 aa12.27□□□□□ -0.45
PKM-212ENST00000564440 CADPS2Q86UW7 1296 aa12.27□□□□□ -0.45
PKM-212ENST00000564440 RRP7AQ9Y3A4 280 aaKnown RBP12.27□□□□□ -0.45
PKM-212ENST00000564440 SRCAPQ6ZRS2 3230 aa12.26□□□□□ -0.45
PKM-212ENST00000564440 NBR1Q14596 966 aa12.26□□□□□ -0.45
PKM-212ENST00000564440 ZBED9Q6R2W3 1325 aa12.25□□□□□ -0.45
PKM-212ENST00000564440 KIF20BQ96Q89 1820 aa12.25□□□□□ -0.45
PKM-212ENST00000564440 CDK19Q9BWU1 502 aa12.25□□□□□ -0.45
PKM-212ENST00000564440 CPSF1Q10570 1443 aaKnown RBP12.25□□□□□ -0.45
PKM-212ENST00000564440 SBNO1A3KN83 1393 aa12.24□□□□□ -0.45
PKM-212ENST00000564440 PNISRQ8TF01 805 aaKnown RBP12.24□□□□□ -0.45
PKM-212ENST00000564440 ADAMTS8Q9UP79 889 aa12.24□□□□□ -0.45
PKM-212ENST00000564440 NWD2Q9ULI1 1742 aa12.24□□□□□ -0.45
PKM-212ENST00000564440 AMER1Q5JTC6 1135 aaPredicted RBP12.24□□□□□ -0.45
PKM-212ENST00000564440 CD163L1Q9NR16 1453 aa12.24□□□□□ -0.45
PKM-212ENST00000564440 KTN1Q86UP2 1357 aaKnown RBP12.24□□□□□ -0.45
PKM-212ENST00000564440 SLIT3O75094 1523 aa12.24□□□□□ -0.45
PKM-212ENST00000564440 XPCQ01831 940 aaPredicted RBP12.23□□□□□ -0.45
PKM-212ENST00000564440 PROSER2Q86WR7 435 aaPredicted RBP12.23□□□□□ -0.45
PKM-212ENST00000564440 ATAD2Q6PL18 1390 aa12.22□□□□□ -0.45
PKM-212ENST00000564440 PPP2R1AP30153 589 aa12.22□□□□□ -0.45
PKM-212ENST00000564440 PLEKHG3A1L390 1219 aa12.21□□□□□ -0.45
PKM-212ENST00000564440 PAK3O75914 559 aaPredicted RBP12.21□□□□□ -0.45
PKM-212ENST00000564440 PIK3C2AO00443 1686 aa12.21□□□□□ -0.45
PKM-212ENST00000564440 TOM1O60784 492 aa12.21□□□□□ -0.45
PKM-212ENST00000564440 SOS2Q07890 1332 aaPredicted RBP12.2□□□□□ -0.46
PKM-212ENST00000564440 MYBBP1AQ9BQG0 1328 aaKnown RBP12.2□□□□□ -0.46
PKM-212ENST00000564440 NSD3Q9BZ95 1437 aa12.2□□□□□ -0.46
PKM-212ENST00000564440 ZBTB7CA1YPR0 619 aa12.2□□□□□ -0.46
PKM-212ENST00000564440 WASLO00401 505 aaPredicted RBP12.2□□□□□ -0.46
PKM-212ENST00000564440 MORC1Q86VD1 984 aa12.2□□□□□ -0.46
PKM-212ENST00000564440 ANP32AP39687 249 aaKnown RBP12.19□□□□□ -0.46
PKM-212ENST00000564440 C14orf37Q86TY3 774 aa12.19□□□□□ -0.46
PKM-212ENST00000564440 NRAPQ86VF7 1730 aa12.19□□□□□ -0.46
PKM-212ENST00000564440 ANO8Q9HCE9 1232 aaPredicted RBP12.19□□□□□ -0.46
PKM-212ENST00000564440 LMO7Q8WWI1 1683 aa12.18□□□□□ -0.46
PKM-212ENST00000564440 FAM208AQ9UK61 1670 aaKnown RBP12.18□□□□□ -0.46
PKM-212ENST00000564440 COL18A1P39060 1754 aa12.18□□□□□ -0.46
PKM-212ENST00000564440 PLIN1O60240 522 aa12.18□□□□□ -0.46
PKM-212ENST00000564440 MTHFSP49914 203 aa12.18□□□□□ -0.46
PKM-212ENST00000564440 RTL5Q5HYW3 569 aaPredicted RBP12.18□□□□□ -0.46
PKM-212ENST00000564440 NLRP13Q86W25 1043 aa12.18□□□□□ -0.46
PKM-212ENST00000564440 NME9Q86XW9 330 aa12.18□□□□□ -0.46
PKM-212ENST00000564440 CCDC136Q96JN2 1154 aa12.18□□□□□ -0.46
PKM-212ENST00000564440 EVC2Q86UK5 1308 aa12.18□□□□□ -0.46
PKM-212ENST00000564440 RRS1Q15050 365 aaKnown RBP12.17□□□□□ -0.46
PKM-212ENST00000564440 IPO9Q96P70 1041 aaKnown RBP12.17□□□□□ -0.46
PKM-212ENST00000564440 CAMTA1Q9Y6Y1 1673 aa12.17□□□□□ -0.46
PKM-212ENST00000564440 U2SURPO15042 1029 aaKnown RBP12.17□□□□□ -0.46
PKM-212ENST00000564440 ZBTB47Q9UFB7 747 aaPredicted RBP12.17□□□□□ -0.46
PKM-212ENST00000564440 WNK3Q9BYP7 1800 aa12.16□□□□□ -0.46
PKM-212ENST00000564440 DDX17Q92841 729 aaKnown RBP12.16□□□□□ -0.46
PKM-212ENST00000564440 SLAIN2Q9P270 581 aa12.16□□□□□ -0.46
PKM-212ENST00000564440 USP31Q70CQ4 1352 aa12.16□□□□□ -0.46
PKM-212ENST00000564440 PRR36Q9H6K5 1346 aa12.16□□□□□ -0.46
PKM-212ENST00000564440 COL14A1Q05707 1796 aaKnown RBP12.16□□□□□ -0.46
PKM-212ENST00000564440 LMOD2Q6P5Q4 547 aa12.16□□□□□ -0.46
PKM-212ENST00000564440 PLCH1Q4KWH8 1693 aa12.15□□□□□ -0.46
PKM-212ENST00000564440 APAF1O14727 1248 aa12.15□□□□□ -0.46
PKM-212ENST00000564440 A0A1W2PP64 1363 aa12.15□□□□□ -0.46
PKM-212ENST00000564440 WDR43Q15061 677 aaKnown RBP eCLIP12.15□□□□□ -0.46
PKM-212ENST00000564440 TNS3Q68CZ2 1445 aa12.15□□□□□ -0.46
PKM-212ENST00000564440 BRINP3Q76B58 766 aa12.14□□□□□ -0.47
PKM-212ENST00000564440 USP6P35125 1406 aa12.14□□□□□ -0.47
PKM-212ENST00000564440 RALBP1Q15311 655 aa12.14□□□□□ -0.47
PKM-212ENST00000564440 CDCA8Q53HL2 280 aa12.14□□□□□ -0.47
PKM-212ENST00000564440 PARD3Q8TEW0 1356 aa12.13□□□□□ -0.47
PKM-212ENST00000564440 ATF3P18847 181 aa12.13□□□□□ -0.47
PKM-212ENST00000564440 NUDT16Q96DE0 195 aaKnown RBP12.13□□□□□ -0.47
PKM-212ENST00000564440 SPINK5Q9NQ38 1064 aaPredicted RBP12.13□□□□□ -0.47
PKM-212ENST00000564440 NFAT5O94916 1531 aa12.13□□□□□ -0.47
PKM-212ENST00000564440 NPC1L1Q9UHC9 1359 aa12.13□□□□□ -0.47
PKM-212ENST00000564440 NUDCQ9Y266 331 aa12.13□□□□□ -0.47
PKM-212ENST00000564440 EMILIN1Q9Y6C2 1016 aa12.13□□□□□ -0.47
PKM-212ENST00000564440 EDC4Q6P2E9 1401 aaKnown RBP12.12□□□□□ -0.47
PKM-212ENST00000564440 FYB1O15117 783 aa12.12□□□□□ -0.47
PKM-212ENST00000564440 HMOX1P09601 288 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms