RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 CRYBG1Q9Y4K1 1723 aa24.31■■□□□ 1.48
USB1-209ENST00000564387 CD163L1Q9NR16 1453 aa24.31■■□□□ 1.48
USB1-209ENST00000564387 NINLQ9Y2I6 1382 aa24.29■■□□□ 1.48
USB1-209ENST00000564387 PAK3O75914 559 aaPredicted RBP24.29■■□□□ 1.48
USB1-209ENST00000564387 ADAMTS2O95450 1211 aa24.28■■□□□ 1.48
USB1-209ENST00000564387 EIF4G2P78344 907 aaKnown RBP eCLIP24.28■■□□□ 1.48
USB1-209ENST00000564387 LMOD2Q6P5Q4 547 aa24.28■■□□□ 1.48
USB1-209ENST00000564387 FNBP4Q8N3X1 1017 aaPredicted RBP24.28■■□□□ 1.48
USB1-209ENST00000564387 CABLES1Q8TDN4 633 aa24.27■■□□□ 1.48
USB1-209ENST00000564387 SLC12A5Q9H2X9 1139 aa24.27■■□□□ 1.48
USB1-209ENST00000564387 POTEAQ6S8J7 498 aa24.26■■□□□ 1.47
USB1-209ENST00000564387 ILDR2Q71H61 639 aa24.26■■□□□ 1.47
USB1-209ENST00000564387 MON2Q7Z3U7 1717 aa24.26■■□□□ 1.47
USB1-209ENST00000564387 NRKQ7Z2Y5 1582 aa24.25■■□□□ 1.47
USB1-209ENST00000564387 HSPA5P11021 654 aaKnown RBP24.25■■□□□ 1.47
USB1-209ENST00000564387 CDCA8Q53HL2 280 aa24.25■■□□□ 1.47
USB1-209ENST00000564387 ZNF772Q68DY9 489 aaPredicted RBP24.25■■□□□ 1.47
USB1-209ENST00000564387 C8orf37Q96NL8 207 aa24.25■■□□□ 1.47
USB1-209ENST00000564387 AFF2P51816 1311 aa24.25■■□□□ 1.47
USB1-209ENST00000564387 ABTB2Q8N961 1025 aa24.23■■□□□ 1.47
USB1-209ENST00000564387 NGLY1Q96IV0 654 aa24.23■■□□□ 1.47
USB1-209ENST00000564387 USP19O94966 1318 aa24.23■■□□□ 1.47
USB1-209ENST00000564387 TTC21BQ7Z4L5 1316 aa24.23■■□□□ 1.47
USB1-209ENST00000564387 KTN1Q86UP2 1357 aaKnown RBP24.23■■□□□ 1.47
USB1-209ENST00000564387 TTC21AQ8NDW8 1320 aa24.22■■□□□ 1.47
USB1-209ENST00000564387 SLIT2O94813 1529 aa24.21■■□□□ 1.47
USB1-209ENST00000564387 TMC1Q8TDI8 760 aa24.21■■□□□ 1.47
USB1-209ENST00000564387 TERF2IPQ9NYB0 399 aa24.21■■□□□ 1.47
USB1-209ENST00000564387 PIK3C2AO00443 1686 aa24.21■■□□□ 1.47
USB1-209ENST00000564387 BCL9LQ86UU0 1499 aa24.2■■□□□ 1.47
USB1-209ENST00000564387 A0A1W2PP64 1363 aa24.2■■□□□ 1.46
USB1-209ENST00000564387 PHRF1Q9P1Y6 1649 aaKnown RBP24.2■■□□□ 1.46
USB1-209ENST00000564387 HDGFL2Q7Z4V5 671 aaPredicted RBP24.19■■□□□ 1.46
USB1-209ENST00000564387 NLRP13Q86W25 1043 aa24.19■■□□□ 1.46
USB1-209ENST00000564387 EDC4Q6P2E9 1401 aaKnown RBP24.18■■□□□ 1.46
USB1-209ENST00000564387 HAP1P54257 671 aaPredicted RBP24.17■■□□□ 1.46
USB1-209ENST00000564387 NUTM2GQ5VZR2 741 aa24.17■■□□□ 1.46
USB1-209ENST00000564387 ANKRD36BQ8N2N9 1353 aa24.16■■□□□ 1.46
USB1-209ENST00000564387 FAM83GA6ND36 823 aa24.16■■□□□ 1.46
USB1-209ENST00000564387 USP21Q9UK80 565 aa24.16■■□□□ 1.46
USB1-209ENST00000564387 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.15■■□□□ 1.46
USB1-209ENST00000564387 SLIT3O75094 1523 aa24.15■■□□□ 1.46
USB1-209ENST00000564387 NWD2Q9ULI1 1742 aa24.15■■□□□ 1.46
USB1-209ENST00000564387 USP31Q70CQ4 1352 aa24.15■■□□□ 1.46
USB1-209ENST00000564387 MYOM1P52179 1685 aa24.15■■□□□ 1.46
USB1-209ENST00000564387 USP54Q70EL1 1684 aa24.15■■□□□ 1.46
USB1-209ENST00000564387 NLRP6P59044 892 aa24.14■■□□□ 1.45
USB1-209ENST00000564387 CPDO75976 1380 aa24.14■■□□□ 1.45
USB1-209ENST00000564387 ATRNO75882 1429 aa24.13■■□□□ 1.45
USB1-209ENST00000564387 GCP02774 474 aa24.13■■□□□ 1.45
USB1-209ENST00000564387 QTRT2Q9H974 415 aaKnown RBP24.13■■□□□ 1.45
USB1-209ENST00000564387 COL14A1Q05707 1796 aaKnown RBP24.13■■□□□ 1.45
USB1-209ENST00000564387 PLCH1Q4KWH8 1693 aa24.12■■□□□ 1.45
USB1-209ENST00000564387 PLEKHG5O94827 1062 aa24.12■■□□□ 1.45
USB1-209ENST00000564387 UNC5CLQ8IV45 518 aa24.11■■□□□ 1.45
USB1-209ENST00000564387 TRPC5Q9UL62 973 aaPredicted RBP24.11■■□□□ 1.45
USB1-209ENST00000564387 KIAA0232Q92628 1395 aa24.1■■□□□ 1.45
USB1-209ENST00000564387 CDK12Q9NYV4 1490 aaPredicted RBP24.09■■□□□ 1.45
USB1-209ENST00000564387 C11orf95C9JLR9 678 aaPredicted RBP24.09■■□□□ 1.45
USB1-209ENST00000564387 RXRBP28702 533 aa24.08■■□□□ 1.45
USB1-209ENST00000564387 RBM6P78332 1123 aaKnown RBP24.08■■□□□ 1.45
USB1-209ENST00000564387 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.08■■□□□ 1.45
USB1-209ENST00000564387 NRAPQ86VF7 1730 aa24.07■■□□□ 1.44
USB1-209ENST00000564387 NME9Q86XW9 330 aa24.07■■□□□ 1.44
USB1-209ENST00000564387 PRDM11Q9NQV5 511 aa24.07■■□□□ 1.44
USB1-209ENST00000564387 ZC3H6P61129 1189 aaKnown RBP24.06■■□□□ 1.44
USB1-209ENST00000564387 LMO7Q8WWI1 1683 aa24.05■■□□□ 1.44
USB1-209ENST00000564387 OVOS2A0A0J9YW53 1432 aa24.05■■□□□ 1.44
USB1-209ENST00000564387 OVOS2Q6IE36 1432 aa24.05■■□□□ 1.44
USB1-209ENST00000564387 KCNH5Q8NCM2 988 aa24.05■■□□□ 1.44
USB1-209ENST00000564387 ZRANB1Q9UGI0 708 aa24.05■■□□□ 1.44
USB1-209ENST00000564387 NFAT5O94916 1531 aa24.05■■□□□ 1.44
USB1-209ENST00000564387 VPS72Q15906 364 aa24.04■■□□□ 1.44
USB1-209ENST00000564387 CARD14Q9BXL6 1004 aa24.04■■□□□ 1.44
USB1-209ENST00000564387 BTG4Q9NY30 223 aa24.04■■□□□ 1.44
USB1-209ENST00000564387 GJD4Q96KN9 370 aaPredicted RBP24.03■■□□□ 1.44
USB1-209ENST00000564387 CHRNA2Q15822 529 aa24.02■■□□□ 1.44
USB1-209ENST00000564387 ARHGEF25Q86VW2 580 aa24.02■■□□□ 1.44
USB1-209ENST00000564387 AATKQ6ZMQ8 1374 aa24.02■■□□□ 1.44
USB1-209ENST00000564387 CAMTA1Q9Y6Y1 1673 aa24.01■■□□□ 1.43
USB1-209ENST00000564387 COL18A1P39060 1754 aa24.01■■□□□ 1.43
USB1-209ENST00000564387 GLI3P10071 1580 aa24■■□□□ 1.43
USB1-209ENST00000564387 FYB1O15117 783 aa24■■□□□ 1.43
USB1-209ENST00000564387 KIF7Q2M1P5 1343 aa23.99■■□□□ 1.43
USB1-209ENST00000564387 SOCS7O14512 581 aa23.98■■□□□ 1.43
USB1-209ENST00000564387 RGS12O14924 1447 aa23.97■■□□□ 1.43
USB1-209ENST00000564387 ONECUT3O60422 494 aaPredicted RBP23.97■■□□□ 1.43
USB1-209ENST00000564387 ABCC6O95255 1503 aa23.97■■□□□ 1.43
USB1-209ENST00000564387 NSD3Q9BZ95 1437 aa23.95■■□□□ 1.42
USB1-209ENST00000564387 SPATA31A5Q5VU36 1347 aa23.94■■□□□ 1.42
USB1-209ENST00000564387 SPATA31A7Q8IWB4 1347 aa23.94■■□□□ 1.42
USB1-209ENST00000564387 COG3Q96JB2 828 aa23.94■■□□□ 1.42
USB1-209ENST00000564387 COL5A2P05997 1499 aaPredicted RBP23.94■■□□□ 1.42
USB1-209ENST00000564387 POLR3GLQ9BT43 218 aa23.93■■□□□ 1.42
USB1-209ENST00000564387 AXIN2Q9Y2T1 843 aa23.93■■□□□ 1.42
USB1-209ENST00000564387 KIF20BQ96Q89 1820 aa23.93■■□□□ 1.42
USB1-209ENST00000564387 PANK3Q9H999 370 aa23.92■■□□□ 1.42
USB1-209ENST00000564387 GGNBP2Q9H3C7 697 aa23.91■■□□□ 1.42
USB1-209ENST00000564387 CCDC7Q96M83 1385 aa23.91■■□□□ 1.42
USB1-209ENST00000564387 SPATA31A1Q5TZJ5 1347 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms