RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 CD163L1Q9NR16 1453 aa23.21■■□□□ 1.31
RNF40-206ENST00000564260 KTN1Q86UP2 1357 aaKnown RBP23.2■■□□□ 1.3
RNF40-206ENST00000564260 AKAP12Q02952 1782 aa23.19■■□□□ 1.3
RNF40-206ENST00000564260 EDC4Q6P2E9 1401 aaKnown RBP23.19■■□□□ 1.3
RNF40-206ENST00000564260 SLC12A5Q9H2X9 1139 aa23.19■■□□□ 1.3
RNF40-206ENST00000564260 PAK3O75914 559 aaPredicted RBP23.18■■□□□ 1.3
RNF40-206ENST00000564260 A0A1W2PP64 1363 aa23.17■■□□□ 1.3
RNF40-206ENST00000564260 MON2Q7Z3U7 1717 aa23.16■■□□□ 1.3
RNF40-206ENST00000564260 NRKQ7Z2Y5 1582 aa23.15■■□□□ 1.3
RNF40-206ENST00000564260 TTC21BQ7Z4L5 1316 aa23.15■■□□□ 1.3
RNF40-206ENST00000564260 ABTB2Q8N961 1025 aa23.15■■□□□ 1.3
RNF40-206ENST00000564260 LRP6O75581 1613 aa23.15■■□□□ 1.3
RNF40-206ENST00000564260 LMOD2Q6P5Q4 547 aa23.14■■□□□ 1.29
RNF40-206ENST00000564260 NLRP13Q86W25 1043 aa23.14■■□□□ 1.29
RNF40-206ENST00000564260 USP19O94966 1318 aa23.12■■□□□ 1.29
RNF40-206ENST00000564260 USP31Q70CQ4 1352 aa23.11■■□□□ 1.29
RNF40-206ENST00000564260 MEX3CQ5U5Q3 659 aaKnown RBP23.1■■□□□ 1.29
RNF40-206ENST00000564260 MYOM1P52179 1685 aa23.09■■□□□ 1.29
RNF40-206ENST00000564260 NUTM2BA6NNL0 878 aaPredicted RBP23.09■■□□□ 1.29
RNF40-206ENST00000564260 NUTM2EB1AL46 878 aaPredicted RBP23.09■■□□□ 1.29
RNF40-206ENST00000564260 HAP1P54257 671 aaPredicted RBP23.09■■□□□ 1.29
RNF40-206ENST00000564260 NUTM2AQ8IVF1 878 aaPredicted RBP23.09■■□□□ 1.29
RNF40-206ENST00000564260 KIF7Q2M1P5 1343 aa23.08■■□□□ 1.28
RNF40-206ENST00000564260 USP54Q70EL1 1684 aa23.07■■□□□ 1.28
RNF40-206ENST00000564260 PIK3C2AO00443 1686 aa23.06■■□□□ 1.28
RNF40-206ENST00000564260 ABCA3Q99758 1704 aa23.06■■□□□ 1.28
RNF40-206ENST00000564260 CRYBG1Q9Y4K1 1723 aa23.06■■□□□ 1.28
RNF40-206ENST00000564260 NLRP6P59044 892 aa23.06■■□□□ 1.28
RNF40-206ENST00000564260 KCNH5Q8NCM2 988 aa23.06■■□□□ 1.28
RNF40-206ENST00000564260 PHF23Q9BUL5 403 aaPredicted RBP23.06■■□□□ 1.28
RNF40-206ENST00000564260 SLIT3O75094 1523 aa23.06■■□□□ 1.28
RNF40-206ENST00000564260 CPDO75976 1380 aa23.05■■□□□ 1.28
RNF40-206ENST00000564260 C11orf95C9JLR9 678 aaPredicted RBP23.05■■□□□ 1.28
RNF40-206ENST00000564260 ZNF772Q68DY9 489 aaPredicted RBP23.05■■□□□ 1.28
RNF40-206ENST00000564260 FNBP4Q8N3X1 1017 aaPredicted RBP23.05■■□□□ 1.28
RNF40-206ENST00000564260 CCDC7Q96M83 1385 aa23.03■■□□□ 1.28
RNF40-206ENST00000564260 MARF1Q9Y4F3 1742 aaKnown RBP23.02■■□□□ 1.28
RNF40-206ENST00000564260 PHRF1Q9P1Y6 1649 aaKnown RBP23.02■■□□□ 1.28
RNF40-206ENST00000564260 ADAMTS2O95450 1211 aa23.02■■□□□ 1.28
RNF40-206ENST00000564260 GCP02774 474 aa23.02■■□□□ 1.28
RNF40-206ENST00000564260 OVOS2A0A0J9YW53 1432 aa23.01■■□□□ 1.27
RNF40-206ENST00000564260 OVOS2Q6IE36 1432 aa23.01■■□□□ 1.27
RNF40-206ENST00000564260 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.01■■□□□ 1.27
RNF40-206ENST00000564260 CABLES1Q8TDN4 633 aa23.01■■□□□ 1.27
RNF40-206ENST00000564260 NGLY1Q96IV0 654 aa23.01■■□□□ 1.27
RNF40-206ENST00000564260 C8orf37Q96NL8 207 aa23.01■■□□□ 1.27
RNF40-206ENST00000564260 POLR3GLQ9BT43 218 aa23■■□□□ 1.27
RNF40-206ENST00000564260 CGNL1Q0VF96 1302 aa23■■□□□ 1.27
RNF40-206ENST00000564260 NSD3Q9BZ95 1437 aa22.99■■□□□ 1.27
RNF40-206ENST00000564260 SLIT2O94813 1529 aa22.99■■□□□ 1.27
RNF40-206ENST00000564260 WASHC2AQ641Q2 1341 aa22.99■■□□□ 1.27
RNF40-206ENST00000564260 NUTM2GQ5VZR2 741 aa22.98■■□□□ 1.27
RNF40-206ENST00000564260 COG3Q96JB2 828 aa22.98■■□□□ 1.27
RNF40-206ENST00000564260 CARD14Q9BXL6 1004 aa22.98■■□□□ 1.27
RNF40-206ENST00000564260 AFF2P51816 1311 aa22.98■■□□□ 1.27
RNF40-206ENST00000564260 NSD2O96028 1365 aa22.98■■□□□ 1.27
RNF40-206ENST00000564260 ABCC6O95255 1503 aa22.98■■□□□ 1.27
RNF40-206ENST00000564260 NME9Q86XW9 330 aa22.97■■□□□ 1.27
RNF40-206ENST00000564260 PANK3Q9H999 370 aa22.97■■□□□ 1.27
RNF40-206ENST00000564260 PRDM11Q9NQV5 511 aa22.97■■□□□ 1.27
RNF40-206ENST00000564260 COL14A1Q05707 1796 aaKnown RBP22.96■■□□□ 1.27
RNF40-206ENST00000564260 FYB1O15117 783 aa22.96■■□□□ 1.27
RNF40-206ENST00000564260 NWD2Q9ULI1 1742 aa22.96■■□□□ 1.27
RNF40-206ENST00000564260 KIAA0232Q92628 1395 aa22.95■■□□□ 1.26
RNF40-206ENST00000564260 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.94■■□□□ 1.26
RNF40-206ENST00000564260 NFAT5O94916 1531 aa22.93■■□□□ 1.26
RNF40-206ENST00000564260 BCL9LQ86UU0 1499 aa22.93■■□□□ 1.26
RNF40-206ENST00000564260 AATKQ6ZMQ8 1374 aa22.93■■□□□ 1.26
RNF40-206ENST00000564260 FAM83GA6ND36 823 aa22.93■■□□□ 1.26
RNF40-206ENST00000564260 UNC5CLQ8IV45 518 aa22.93■■□□□ 1.26
RNF40-206ENST00000564260 RGS17Q9UGC6 210 aaPredicted RBP22.93■■□□□ 1.26
RNF40-206ENST00000564260 USP21Q9UK80 565 aa22.93■■□□□ 1.26
RNF40-206ENST00000564260 ARHGEF25Q86VW2 580 aa22.92■■□□□ 1.26
RNF40-206ENST00000564260 TRPC5Q9UL62 973 aaPredicted RBP22.92■■□□□ 1.26
RNF40-206ENST00000564260 KNSTRNQ9Y448 316 aa22.92■■□□□ 1.26
RNF40-206ENST00000564260 NPC1L1Q9UHC9 1359 aa22.89■■□□□ 1.26
RNF40-206ENST00000564260 ZC3H6P61129 1189 aaKnown RBP22.89■■□□□ 1.25
RNF40-206ENST00000564260 ATRNO75882 1429 aa22.89■■□□□ 1.25
RNF40-206ENST00000564260 KIF20BQ96Q89 1820 aa22.89■■□□□ 1.25
RNF40-206ENST00000564260 KIF24Q5T7B8 1368 aa22.89■■□□□ 1.25
RNF40-206ENST00000564260 PLCH1Q4KWH8 1693 aa22.88■■□□□ 1.25
RNF40-206ENST00000564260 PLEKHG5O94827 1062 aa22.87■■□□□ 1.25
RNF40-206ENST00000564260 BTG4Q9NY30 223 aa22.87■■□□□ 1.25
RNF40-206ENST00000564260 LMO7Q8WWI1 1683 aa22.87■■□□□ 1.25
RNF40-206ENST00000564260 PER1O15534 1290 aaPredicted RBP22.86■■□□□ 1.25
RNF40-206ENST00000564260 VPS72Q15906 364 aa22.86■■□□□ 1.25
RNF40-206ENST00000564260 GGNBP2Q9H3C7 697 aa22.86■■□□□ 1.25
RNF40-206ENST00000564260 QTRT2Q9H974 415 aaKnown RBP22.86■■□□□ 1.25
RNF40-206ENST00000564260 ZRANB1Q9UGI0 708 aa22.86■■□□□ 1.25
RNF40-206ENST00000564260 RTL1A6NKG5 1358 aa22.86■■□□□ 1.25
RNF40-206ENST00000564260 CDK12Q9NYV4 1490 aaPredicted RBP22.85■■□□□ 1.25
RNF40-206ENST00000564260 RBM6P78332 1123 aaKnown RBP22.84■■□□□ 1.25
RNF40-206ENST00000564260 BLMP54132 1417 aaPredicted RBP22.83■■□□□ 1.25
RNF40-206ENST00000564260 NRAPQ86VF7 1730 aa22.83■■□□□ 1.25
RNF40-206ENST00000564260 AMER1Q5JTC6 1135 aaPredicted RBP22.83■■□□□ 1.25
RNF40-206ENST00000564260 RXRBP28702 533 aa22.82■■□□□ 1.24
RNF40-206ENST00000564260 POTEAQ6S8J7 498 aa22.82■■□□□ 1.24
RNF40-206ENST00000564260 ANKRD26Q9UPS8 1709 aa22.82■■□□□ 1.24
RNF40-206ENST00000564260 COL5A2P05997 1499 aaPredicted RBP22.81■■□□□ 1.24
RNF40-206ENST00000564260 CHRNA2Q15822 529 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 154.3 ms