RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 PANK3Q9H999 370 aa14.35□□□□□ -0.11
TCF4-222ENST00000564228 PTCH1Q13635 1447 aa14.35□□□□□ -0.11
TCF4-222ENST00000564228 CDK19Q9BWU1 502 aa14.34□□□□□ -0.11
TCF4-222ENST00000564228 MYBBP1AQ9BQG0 1328 aaKnown RBP14.33□□□□□ -0.12
TCF4-222ENST00000564228 RALBP1Q15311 655 aa14.31□□□□□ -0.12
TCF4-222ENST00000564228 SLC12A5Q9H2X9 1139 aa14.31□□□□□ -0.12
TCF4-222ENST00000564228 ADGRB2O60241 1585 aa14.31□□□□□ -0.12
TCF4-222ENST00000564228 WASLO00401 505 aaPredicted RBP14.31□□□□□ -0.12
TCF4-222ENST00000564228 PUS7Q96PZ0 661 aaKnown RBP14.3□□□□□ -0.12
TCF4-222ENST00000564228 ATAD2Q6PL18 1390 aa14.3□□□□□ -0.12
TCF4-222ENST00000564228 NALCNQ8IZF0 1738 aa14.3□□□□□ -0.12
TCF4-222ENST00000564228 NWD1Q149M9 1564 aa14.29□□□□□ -0.12
TCF4-222ENST00000564228 L1TD1Q5T7N2 865 aaKnown RBP14.29□□□□□ -0.12
TCF4-222ENST00000564228 RBM33Q96EV2 1170 aaKnown RBP14.29□□□□□ -0.12
TCF4-222ENST00000564228 KDM2BQ8NHM5 1336 aa14.29□□□□□ -0.12
TCF4-222ENST00000564228 STRCP1A6NGW2 1772 aa14.29□□□□□ -0.12
TCF4-222ENST00000564228 RGPD8O14715 1765 aaPredicted RBP14.29□□□□□ -0.12
TCF4-222ENST00000564228 PER1O15534 1290 aaPredicted RBP14.29□□□□□ -0.12
TCF4-222ENST00000564228 FAM161AQ3B820 660 aa14.29□□□□□ -0.12
TCF4-222ENST00000564228 NUTM2FA1L443 756 aa14.27□□□□□ -0.12
TCF4-222ENST00000564228 FRAT2O75474 233 aaPredicted RBP14.27□□□□□ -0.12
TCF4-222ENST00000564228 KNSTRNQ9Y448 316 aa14.27□□□□□ -0.12
TCF4-222ENST00000564228 CENPQQ7L2Z9 268 aaPredicted RBP14.26□□□□□ -0.13
TCF4-222ENST00000564228 NINLQ9Y2I6 1382 aa14.25□□□□□ -0.13
TCF4-222ENST00000564228 CC2D1BQ5T0F9 858 aaKnown RBP14.25□□□□□ -0.13
TCF4-222ENST00000564228 BLMP54132 1417 aaPredicted RBP14.25□□□□□ -0.13
TCF4-222ENST00000564228 RRP9O43818 475 aaKnown RBP14.25□□□□□ -0.13
TCF4-222ENST00000564228 C14orf37Q86TY3 774 aa14.25□□□□□ -0.13
TCF4-222ENST00000564228 NUDT16Q96DE0 195 aaKnown RBP14.25□□□□□ -0.13
TCF4-222ENST00000564228 CARD14Q9BXL6 1004 aa14.25□□□□□ -0.13
TCF4-222ENST00000564228 CABP1Q9NZU7 370 aa14.25□□□□□ -0.13
TCF4-222ENST00000564228 ITSN1Q15811 1721 aa14.25□□□□□ -0.13
TCF4-222ENST00000564228 ATP7BP35670 1465 aa14.24□□□□□ -0.13
TCF4-222ENST00000564228 ANKRD36BQ8N2N9 1353 aa14.24□□□□□ -0.13
TCF4-222ENST00000564228 PPIP5K1Q6PFW1 1433 aa14.24□□□□□ -0.13
TCF4-222ENST00000564228 NSD3Q9BZ95 1437 aa14.24□□□□□ -0.13
TCF4-222ENST00000564228 NKTRP30414 1462 aaKnown RBP14.24□□□□□ -0.13
TCF4-222ENST00000564228 FMN2Q9NZ56 1722 aa14.24□□□□□ -0.13
TCF4-222ENST00000564228 USP32Q8NFA0 1604 aa14.23□□□□□ -0.13
TCF4-222ENST00000564228 C8orf34Q49A92 452 aa14.23□□□□□ -0.13
TCF4-222ENST00000564228 PROSER2Q86WR7 435 aaPredicted RBP14.23□□□□□ -0.13
TCF4-222ENST00000564228 CRBNQ96SW2 442 aa14.23□□□□□ -0.13
TCF4-222ENST00000564228 RRAGDQ9NQL2 400 aaPredicted RBP14.23□□□□□ -0.13
TCF4-222ENST00000564228 TOPAZ1Q8N9V7 1692 aa14.23□□□□□ -0.13
TCF4-222ENST00000564228 PRR36Q9H6K5 1346 aa14.23□□□□□ -0.13
TCF4-222ENST00000564228 A0A1W2PP64 1363 aa14.23□□□□□ -0.13
TCF4-222ENST00000564228 SLC4A3P48751 1232 aa14.23□□□□□ -0.13
TCF4-222ENST00000564228 CD163L1Q9NR16 1453 aa14.22□□□□□ -0.13
TCF4-222ENST00000564228 TERF2IPQ9NYB0 399 aa14.22□□□□□ -0.13
TCF4-222ENST00000564228 PARD3Q8TEW0 1356 aa14.22□□□□□ -0.13
TCF4-222ENST00000564228 ADGRL3Q9HAR2 1447 aa14.22□□□□□ -0.13
TCF4-222ENST00000564228 CDC42BPGQ6DT37 1551 aa14.21□□□□□ -0.13
TCF4-222ENST00000564228 NLRP13Q86W25 1043 aa14.21□□□□□ -0.13
TCF4-222ENST00000564228 CCDC61Q9Y6R9 512 aa14.21□□□□□ -0.13
TCF4-222ENST00000564228 AKAP12Q02952 1782 aa14.21□□□□□ -0.13
TCF4-222ENST00000564228 HDGFL2Q7Z4V5 671 aaPredicted RBP14.21□□□□□ -0.14
TCF4-222ENST00000564228 ZMYND15Q9H091 742 aa14.19□□□□□ -0.14
TCF4-222ENST00000564228 XIRP1Q702N8 1843 aaKnown RBP14.19□□□□□ -0.14
TCF4-222ENST00000564228 MON2Q7Z3U7 1717 aa14.19□□□□□ -0.14
TCF4-222ENST00000564228 KIF20BQ96Q89 1820 aa14.19□□□□□ -0.14
TCF4-222ENST00000564228 ZNF335Q9H4Z2 1342 aaPredicted RBP14.19□□□□□ -0.14
TCF4-222ENST00000564228 CLCN1P35523 988 aa14.18□□□□□ -0.14
TCF4-222ENST00000564228 TMEM94Q12767 1356 aa14.18□□□□□ -0.14
TCF4-222ENST00000564228 DMRT2Q9Y5R5 561 aa14.17□□□□□ -0.14
TCF4-222ENST00000564228 CGNL1Q0VF96 1302 aa14.17□□□□□ -0.14
TCF4-222ENST00000564228 HSP90AA2PQ14568 343 aaPredicted RBP14.17□□□□□ -0.14
TCF4-222ENST00000564228 VSIG10Q8N0Z9 540 aa14.17□□□□□ -0.14
TCF4-222ENST00000564228 ANKARQ7Z5J8 1434 aa14.16□□□□□ -0.14
TCF4-222ENST00000564228 NPC1L1Q9UHC9 1359 aa14.16□□□□□ -0.14
TCF4-222ENST00000564228 HSP90AA1P07900 732 aaKnown RBP14.16□□□□□ -0.14
TCF4-222ENST00000564228 PMFBP1Q8TBY8 1022 aa14.16□□□□□ -0.14
TCF4-222ENST00000564228 CPSF1Q10570 1443 aaKnown RBP14.16□□□□□ -0.14
TCF4-222ENST00000564228 PNNQ9H307 717 aaKnown RBP14.15□□□□□ -0.14
TCF4-222ENST00000564228 ANKRD26Q9UPS8 1709 aa14.15□□□□□ -0.14
TCF4-222ENST00000564228 ACEP12821 1306 aa14.15□□□□□ -0.14
TCF4-222ENST00000564228 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.15□□□□□ -0.14
TCF4-222ENST00000564228 C19orf44Q9H6X5 657 aa14.14□□□□□ -0.15
TCF4-222ENST00000564228 SENP3-EIF4A1A0A087X0R7 540 aa14.13□□□□□ -0.15
TCF4-222ENST00000564228 PLEKHG3A1L390 1219 aa14.13□□□□□ -0.15
TCF4-222ENST00000564228 PLIN1O60240 522 aa14.13□□□□□ -0.15
TCF4-222ENST00000564228 BECN1Q14457 450 aa14.13□□□□□ -0.15
TCF4-222ENST00000564228 SKAP1Q86WV1 359 aa14.13□□□□□ -0.15
TCF4-222ENST00000564228 EDC4Q6P2E9 1401 aaKnown RBP14.13□□□□□ -0.15
TCF4-222ENST00000564228 MORC1Q86VD1 984 aa14.13□□□□□ -0.15
TCF4-222ENST00000564228 NGDNQ8NEJ9 315 aaKnown RBP14.13□□□□□ -0.15
TCF4-222ENST00000564228 CDCA7LQ96GN5 454 aa14.13□□□□□ -0.15
TCF4-222ENST00000564228 GGNBP2Q9H3C7 697 aa14.13□□□□□ -0.15
TCF4-222ENST00000564228 NRKQ7Z2Y5 1582 aa14.12□□□□□ -0.15
TCF4-222ENST00000564228 TNNT2P45379 298 aaPredicted RBP14.12□□□□□ -0.15
TCF4-222ENST00000564228 NAP1L5Q96NT1 182 aaPredicted RBP14.12□□□□□ -0.15
TCF4-222ENST00000564228 ZNF692Q9BU19 519 aaPredicted RBP14.12□□□□□ -0.15
TCF4-222ENST00000564228 LRRC7Q96NW7 1537 aa14.12□□□□□ -0.15
TCF4-222ENST00000564228 FSD2A1L4K1 749 aa14.11□□□□□ -0.15
TCF4-222ENST00000564228 ATF3P18847 181 aa14.11□□□□□ -0.15
TCF4-222ENST00000564228 ESCO1Q5FWF5 840 aa14.11□□□□□ -0.15
TCF4-222ENST00000564228 NSD2O96028 1365 aa14.11□□□□□ -0.15
TCF4-222ENST00000564228 NCOA3Q9Y6Q9 1424 aa14.11□□□□□ -0.15
TCF4-222ENST00000564228 FYB1O15117 783 aa14.11□□□□□ -0.15
TCF4-222ENST00000564228 PPP2R1AP30153 589 aa14.11□□□□□ -0.15
TCF4-222ENST00000564228 MSH6P52701 1360 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms