RNA–Protein interactions for RNA: ENST00000563522.5

PDXDC1-208, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 4

Gene PDXDC1, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-208ENST00000563522 RALGAPBQ86X10 1494 aa12.16□□□□□ -0.46
PDXDC1-208ENST00000563522 PHF8Q9UPP1 1060 aa12.16□□□□□ -0.46
PDXDC1-208ENST00000563522 TNS3Q68CZ2 1445 aa12.16□□□□□ -0.46
PDXDC1-208ENST00000563522 SBNO1A3KN83 1393 aa12.16□□□□□ -0.46
PDXDC1-208ENST00000563522 DHX57Q6P158 1386 aaKnown RBP12.16□□□□□ -0.46
PDXDC1-208ENST00000563522 BLMP54132 1417 aaPredicted RBP12.15□□□□□ -0.46
PDXDC1-208ENST00000563522 ARHGEF10O15013 1369 aa12.15□□□□□ -0.46
PDXDC1-208ENST00000563522 USP32Q8NFA0 1604 aa12.15□□□□□ -0.47
PDXDC1-208ENST00000563522 VPS72Q15906 364 aa12.14□□□□□ -0.47
PDXDC1-208ENST00000563522 GLI3P10071 1580 aa12.13□□□□□ -0.47
PDXDC1-208ENST00000563522 ANKARQ7Z5J8 1434 aa12.13□□□□□ -0.47
PDXDC1-208ENST00000563522 ONECUT3O60422 494 aaPredicted RBP12.13□□□□□ -0.47
PDXDC1-208ENST00000563522 HAP1P54257 671 aaPredicted RBP12.13□□□□□ -0.47
PDXDC1-208ENST00000563522 EP400Q96L91 3159 aa12.12□□□□□ -0.47
PDXDC1-208ENST00000563522 DLC1Q96QB1 1528 aa12.12□□□□□ -0.47
PDXDC1-208ENST00000563522 CFAP70Q5T0N1 1121 aa12.12□□□□□ -0.47
PDXDC1-208ENST00000563522 PRAM1Q96QH2 718 aa12.12□□□□□ -0.47
PDXDC1-208ENST00000563522 SRCAPQ6ZRS2 3230 aa12.11□□□□□ -0.47
PDXDC1-208ENST00000563522 SEPT12Q8IYM1 358 aa12.11□□□□□ -0.47
PDXDC1-208ENST00000563522 EIF3AQ14152 1382 aaKnown RBP12.1□□□□□ -0.47
PDXDC1-208ENST00000563522 SF3B2Q13435 895 aaKnown RBP12.1□□□□□ -0.47
PDXDC1-208ENST00000563522 CABLES1Q8TDN4 633 aa12.09□□□□□ -0.47
PDXDC1-208ENST00000563522 POGKQ9P215 609 aa12.09□□□□□ -0.47
PDXDC1-208ENST00000563522 ADGRB2O60241 1585 aa12.09□□□□□ -0.47
PDXDC1-208ENST00000563522 NWD2Q9ULI1 1742 aa12.08□□□□□ -0.47
PDXDC1-208ENST00000563522 LMOD2Q6P5Q4 547 aa12.08□□□□□ -0.48
PDXDC1-208ENST00000563522 KRT27Q7Z3Y8 459 aa12.08□□□□□ -0.48
PDXDC1-208ENST00000563522 STAC3Q96MF2 364 aa12.08□□□□□ -0.48
PDXDC1-208ENST00000563522 CCDC9Q9Y3X0 531 aaKnown RBP12.08□□□□□ -0.48
PDXDC1-208ENST00000563522 GPRASP1Q5JY77 1395 aa12.07□□□□□ -0.48
PDXDC1-208ENST00000563522 FAM83GA6ND36 823 aa12.07□□□□□ -0.48
PDXDC1-208ENST00000563522 SAFB2Q14151 953 aaKnown RBP eCLIP12.07□□□□□ -0.48
PDXDC1-208ENST00000563522 ADGRB1O14514 1584 aa12.06□□□□□ -0.48
PDXDC1-208ENST00000563522 PMFBP1Q8TBY8 1022 aa12.06□□□□□ -0.48
PDXDC1-208ENST00000563522 FARP1Q9Y4F1 1045 aaPredicted RBP12.06□□□□□ -0.48
PDXDC1-208ENST00000563522 DEFB132Q7Z7B7 95 aa12.05□□□□□ -0.48
PDXDC1-208ENST00000563522 PLCH1Q4KWH8 1693 aa12.05□□□□□ -0.48
PDXDC1-208ENST00000563522 ABCA3Q99758 1704 aa12.05□□□□□ -0.48
PDXDC1-208ENST00000563522 CREBZFQ9NS37 354 aa12.04□□□□□ -0.48
PDXDC1-208ENST00000563522 TULP4Q9NRJ4 1543 aa12.04□□□□□ -0.48
PDXDC1-208ENST00000563522 WASLO00401 505 aaPredicted RBP12.03□□□□□ -0.48
PDXDC1-208ENST00000563522 BAG6P46379 1132 aa12.03□□□□□ -0.48
PDXDC1-208ENST00000563522 BTG4Q9NY30 223 aa12.03□□□□□ -0.48
PDXDC1-208ENST00000563522 TRAK1Q9UPV9 953 aa12.03□□□□□ -0.48
PDXDC1-208ENST00000563522 PRR36Q9H6K5 1346 aa12.03□□□□□ -0.48
PDXDC1-208ENST00000563522 RAB3GAP2Q9H2M9 1393 aa12.03□□□□□ -0.48
PDXDC1-208ENST00000563522 TRPM3Q9HCF6 1732 aaPredicted RBP12.03□□□□□ -0.48
PDXDC1-208ENST00000563522 RGPD8O14715 1765 aaPredicted RBP12.02□□□□□ -0.48
PDXDC1-208ENST00000563522 BRWD3Q6RI45 1802 aa12.02□□□□□ -0.48
PDXDC1-208ENST00000563522 PLEKHG5O94827 1062 aa12.02□□□□□ -0.49
PDXDC1-208ENST00000563522 FAM98CQ17RN3 349 aaKnown RBP12.02□□□□□ -0.49
PDXDC1-208ENST00000563522 HIRIP3Q9BW71 556 aaPredicted RBP12.02□□□□□ -0.49
PDXDC1-208ENST00000563522 MINK1Q8N4C8 1332 aaPredicted RBP12.02□□□□□ -0.49
PDXDC1-208ENST00000563522 ALS2Q96Q42 1657 aa12.01□□□□□ -0.49
PDXDC1-208ENST00000563522 COL14A1Q05707 1796 aaKnown RBP12.01□□□□□ -0.49
PDXDC1-208ENST00000563522 A0A0G2JS52 829 aa12.01□□□□□ -0.49
PDXDC1-208ENST00000563522 MYT1Q01538 1121 aa12.01□□□□□ -0.49
PDXDC1-208ENST00000563522 NGDNQ8NEJ9 315 aaKnown RBP12.01□□□□□ -0.49
PDXDC1-208ENST00000563522 SPATA31A5Q5VU36 1347 aa12.01□□□□□ -0.49
PDXDC1-208ENST00000563522 SPATA31A7Q8IWB4 1347 aa12.01□□□□□ -0.49
PDXDC1-208ENST00000563522 LRP5O75197 1615 aa12□□□□□ -0.49
PDXDC1-208ENST00000563522 NRAPQ86VF7 1730 aa12□□□□□ -0.49
PDXDC1-208ENST00000563522 DCAF11Q8TEB1 546 aa12□□□□□ -0.49
PDXDC1-208ENST00000563522 DISP2A7MBM2 1401 aa12□□□□□ -0.49
PDXDC1-208ENST00000563522 HRCP23327 699 aa11.99□□□□□ -0.49
PDXDC1-208ENST00000563522 SP7Q8TDD2 431 aaPredicted RBP11.99□□□□□ -0.49
PDXDC1-208ENST00000563522 PRDM11Q9NQV5 511 aa11.99□□□□□ -0.49
PDXDC1-208ENST00000563522 KDM2AQ9Y2K7 1162 aa11.98□□□□□ -0.49
PDXDC1-208ENST00000563522 ATP7BP35670 1465 aa11.97□□□□□ -0.49
PDXDC1-208ENST00000563522 C19orf67A6NJJ6 358 aa11.97□□□□□ -0.49
PDXDC1-208ENST00000563522 PAK3O75914 559 aaPredicted RBP11.97□□□□□ -0.49
PDXDC1-208ENST00000563522 NUDT16Q96DE0 195 aaKnown RBP11.97□□□□□ -0.49
PDXDC1-208ENST00000563522 SPATA31A1Q5TZJ5 1347 aa11.96□□□□□ -0.49
PDXDC1-208ENST00000563522 MIER1Q8N108 512 aa11.96□□□□□ -0.49
PDXDC1-208ENST00000563522 FBXO3Q9UK99 471 aa11.96□□□□□ -0.49
PDXDC1-208ENST00000563522 THSD7AQ9UPZ6 1657 aa11.96□□□□□ -0.5
PDXDC1-208ENST00000563522 POLR3AO14802 1390 aaPredicted RBP11.95□□□□□ -0.5
PDXDC1-208ENST00000563522 KIAA0232Q92628 1395 aa11.95□□□□□ -0.5
PDXDC1-208ENST00000563522 CRYBG1Q9Y4K1 1723 aa11.95□□□□□ -0.5
PDXDC1-208ENST00000563522 EN1Q05925 392 aaPredicted RBP11.95□□□□□ -0.5
PDXDC1-208ENST00000563522 FAM196AQ6ZSG2 479 aa11.95□□□□□ -0.5
PDXDC1-208ENST00000563522 PSDA5PKW4 1024 aaPredicted RBP11.94□□□□□ -0.5
PDXDC1-208ENST00000563522 CCDC61Q9Y6R9 512 aa11.94□□□□□ -0.5
PDXDC1-208ENST00000563522 RGPD1P0DJD0 1748 aa11.94□□□□□ -0.5
PDXDC1-208ENST00000563522 PARD3Q8TEW0 1356 aa11.93□□□□□ -0.5
PDXDC1-208ENST00000563522 PLEKHG3A1L390 1219 aa11.93□□□□□ -0.5
PDXDC1-208ENST00000563522 BARGINQ6ZT62 677 aa11.93□□□□□ -0.5
PDXDC1-208ENST00000563522 PLCD3Q8N3E9 789 aa11.93□□□□□ -0.5
PDXDC1-208ENST00000563522 CDK19Q9BWU1 502 aa11.93□□□□□ -0.5
PDXDC1-208ENST00000563522 ITSN1Q15811 1721 aa11.93□□□□□ -0.5
PDXDC1-208ENST00000563522 CD44P16070 742 aaKnown RBP11.92□□□□□ -0.5
PDXDC1-208ENST00000563522 NBPF8Q3BBV2 869 aa11.92□□□□□ -0.5
PDXDC1-208ENST00000563522 FAM182BQ5T319 152 aa11.92□□□□□ -0.5
PDXDC1-208ENST00000563522 CPDO75976 1380 aa11.92□□□□□ -0.5
PDXDC1-208ENST00000563522 ARHGEF28Q8N1W1 1705 aaKnown RBP11.91□□□□□ -0.5
PDXDC1-208ENST00000563522 ACEP12821 1306 aa11.91□□□□□ -0.5
PDXDC1-208ENST00000563522 R3HDM1Q15032 1099 aaKnown RBP11.91□□□□□ -0.5
PDXDC1-208ENST00000563522 CHRNA2Q15822 529 aa11.91□□□□□ -0.5
PDXDC1-208ENST00000563522 CAMKK2Q96RR4 588 aa11.91□□□□□ -0.5
PDXDC1-208ENST00000563522 STRN4Q9NRL3 753 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms