RNA–Protein interactions for RNA: ENST00000563425.2

CDH5-204, Transcript of cadherin 5, humanhuman

TSL 5 BASIC

Gene CDH5, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-204ENST00000563425 PLEKHF1Q96S99 279 aa25.39■■□□□ 1.66
CDH5-204ENST00000563425 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.39■■□□□ 1.65
CDH5-204ENST00000563425 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.38■■□□□ 1.65
CDH5-204ENST00000563425 TCERG1O14776 1098 aaKnown RBP25.38■■□□□ 1.65
CDH5-204ENST00000563425 NUDT16Q96DE0 195 aaKnown RBP25.38■■□□□ 1.65
CDH5-204ENST00000563425 U2SURPO15042 1029 aaKnown RBP25.37■■□□□ 1.65
CDH5-204ENST00000563425 ROBO2Q9HCK4 1378 aa25.37■■□□□ 1.65
CDH5-204ENST00000563425 SLIT1O75093 1534 aa25.37■■□□□ 1.65
CDH5-204ENST00000563425 LTKP29376 864 aa25.37■■□□□ 1.65
CDH5-204ENST00000563425 CEBPAP49715 358 aaPredicted RBP25.37■■□□□ 1.65
CDH5-204ENST00000563425 DIAPH1O60610 1272 aaKnown RBP25.36■■□□□ 1.65
CDH5-204ENST00000563425 CCDC61Q9Y6R9 512 aa25.35■■□□□ 1.65
CDH5-204ENST00000563425 ARHGAP23Q9P227 1491 aa25.35■■□□□ 1.65
CDH5-204ENST00000563425 KDM2BQ8NHM5 1336 aa25.35■■□□□ 1.65
CDH5-204ENST00000563425 TOPAZ1Q8N9V7 1692 aa25.34■■□□□ 1.65
CDH5-204ENST00000563425 MSH5O43196 834 aa25.33■■□□□ 1.65
CDH5-204ENST00000563425 POLKQ9UBT6 870 aa25.33■■□□□ 1.65
CDH5-204ENST00000563425 PDE3AQ14432 1141 aa25.32■■□□□ 1.64
CDH5-204ENST00000563425 MYH16Q9H6N6 1097 aa25.32■■□□□ 1.64
CDH5-204ENST00000563425 TMPOP42166 694 aaKnown RBP25.31■■□□□ 1.64
CDH5-204ENST00000563425 MAPK8IP3Q9UPT6 1336 aa25.31■■□□□ 1.64
CDH5-204ENST00000563425 MS4A1P11836 297 aa25.31■■□□□ 1.64
CDH5-204ENST00000563425 PNNQ9H307 717 aaKnown RBP25.3■■□□□ 1.64
CDH5-204ENST00000563425 LRRC7Q96NW7 1537 aa25.3■■□□□ 1.64
CDH5-204ENST00000563425 PRR36Q9H6K5 1346 aa25.3■■□□□ 1.64
CDH5-204ENST00000563425 RARSP54136 660 aaKnown RBP25.29■■□□□ 1.64
CDH5-204ENST00000563425 CENPQQ7L2Z9 268 aaPredicted RBP25.29■■□□□ 1.64
CDH5-204ENST00000563425 EID1Q9Y6B2 187 aa25.29■■□□□ 1.64
CDH5-204ENST00000563425 NCKAP5LQ9HCH0 1330 aa25.29■■□□□ 1.64
CDH5-204ENST00000563425 NME9Q86XW9 330 aa25.28■■□□□ 1.64
CDH5-204ENST00000563425 TRIM35Q9UPQ4 493 aa25.28■■□□□ 1.64
CDH5-204ENST00000563425 NRKQ7Z2Y5 1582 aa25.28■■□□□ 1.64
CDH5-204ENST00000563425 AATKQ6ZMQ8 1374 aa25.28■■□□□ 1.64
CDH5-204ENST00000563425 PTPRUQ92729 1446 aa25.28■■□□□ 1.64
CDH5-204ENST00000563425 ZNF692Q9BU19 519 aaPredicted RBP25.27■■□□□ 1.64
CDH5-204ENST00000563425 CDK12Q9NYV4 1490 aaPredicted RBP25.27■■□□□ 1.64
CDH5-204ENST00000563425 ANP32EQ9BTT0 268 aa25.27■■□□□ 1.64
CDH5-204ENST00000563425 FCHSD2O94868 740 aa25.26■■□□□ 1.63
CDH5-204ENST00000563425 FBLN1P23142 703 aa25.25■■□□□ 1.63
CDH5-204ENST00000563425 DIP2AQ14689 1571 aa25.25■■□□□ 1.63
CDH5-204ENST00000563425 IL16Q14005 1332 aa25.24■■□□□ 1.63
CDH5-204ENST00000563425 PPM1GO15355 546 aaPredicted RBP25.24■■□□□ 1.63
CDH5-204ENST00000563425 CANXP27824 592 aaKnown RBP25.24■■□□□ 1.63
CDH5-204ENST00000563425 SLC26A8Q96RN1 970 aa25.23■■□□□ 1.63
CDH5-204ENST00000563425 ZRANB1Q9UGI0 708 aa25.23■■□□□ 1.63
CDH5-204ENST00000563425 CT47B1P0C2W7 299 aaPredicted RBP25.22■■□□□ 1.63
CDH5-204ENST00000563425 COG3Q96JB2 828 aa25.22■■□□□ 1.63
CDH5-204ENST00000563425 RSPH6AQ9H0K4 717 aa25.22■■□□□ 1.63
CDH5-204ENST00000563425 TBX22Q9Y458 520 aa25.22■■□□□ 1.63
CDH5-204ENST00000563425 EMILIN1Q9Y6C2 1016 aa25.22■■□□□ 1.63
CDH5-204ENST00000563425 RIPK4P57078 832 aa25.21■■□□□ 1.63
CDH5-204ENST00000563425 PTCH1Q13635 1447 aa25.2■■□□□ 1.63
CDH5-204ENST00000563425 PDE4AP27815 886 aa25.2■■□□□ 1.62
CDH5-204ENST00000563425 THEMISQ8N1K5 641 aaPredicted RBP25.2■■□□□ 1.62
CDH5-204ENST00000563425 PANK1Q8TE04 598 aa25.2■■□□□ 1.62
CDH5-204ENST00000563425 PLEKHG3A1L390 1219 aa25.19■■□□□ 1.62
CDH5-204ENST00000563425 FRAT1Q92837 279 aaPredicted RBP25.19■■□□□ 1.62
CDH5-204ENST00000563425 NALCNQ8IZF0 1738 aa25.18■■□□□ 1.62
CDH5-204ENST00000563425 XRN1Q8IZH2 1706 aaKnown RBP25.18■■□□□ 1.62
CDH5-204ENST00000563425 BACH2Q9BYV9 841 aa25.18■■□□□ 1.62
CDH5-204ENST00000563425 TRHP20396 242 aaPredicted RBP25.18■■□□□ 1.62
CDH5-204ENST00000563425 PRKAR2BP31323 418 aa25.18■■□□□ 1.62
CDH5-204ENST00000563425 IL13P35225 146 aa25.18■■□□□ 1.62
CDH5-204ENST00000563425 PLPPR3Q6T4P5 718 aa25.18■■□□□ 1.62
CDH5-204ENST00000563425 TSR2Q969E8 191 aaKnown RBP25.18■■□□□ 1.62
CDH5-204ENST00000563425 AMOTL2Q9Y2J4 779 aa25.18■■□□□ 1.62
CDH5-204ENST00000563425 SKAP1Q86WV1 359 aa25.17■■□□□ 1.62
CDH5-204ENST00000563425 RGPD8O14715 1765 aaPredicted RBP25.17■■□□□ 1.62
CDH5-204ENST00000563425 DLG5Q8TDM6 1919 aa25.17■■□□□ 1.62
CDH5-204ENST00000563425 ACEP12821 1306 aa25.16■■□□□ 1.62
CDH5-204ENST00000563425 COG6Q9Y2V7 657 aa25.16■■□□□ 1.62
CDH5-204ENST00000563425 RIMS1Q86UR5 1692 aaKnown RBP25.16■■□□□ 1.62
CDH5-204ENST00000563425 TTC21BQ7Z4L5 1316 aa25.15■■□□□ 1.62
CDH5-204ENST00000563425 CLUAP1Q96AJ1 413 aa25.15■■□□□ 1.62
CDH5-204ENST00000563425 CEP170BQ9Y4F5 1589 aaPredicted RBP25.15■■□□□ 1.62
CDH5-204ENST00000563425 USP6P35125 1406 aa25.14■■□□□ 1.62
CDH5-204ENST00000563425 NEFMP07197 916 aa25.14■■□□□ 1.62
CDH5-204ENST00000563425 MYT1Q01538 1121 aa25.14■■□□□ 1.62
CDH5-204ENST00000563425 EXOSC9Q06265 439 aaKnown RBP25.14■■□□□ 1.62
CDH5-204ENST00000563425 AAMPQ13685 434 aa25.14■■□□□ 1.62
CDH5-204ENST00000563425 ANP32AP39687 249 aaKnown RBP25.14■■□□□ 1.61
CDH5-204ENST00000563425 BCL2L13Q9BXK5 485 aa25.14■■□□□ 1.61
CDH5-204ENST00000563425 OVOS2A0A0J9YW53 1432 aa25.13■■□□□ 1.61
CDH5-204ENST00000563425 OVOS2Q6IE36 1432 aa25.13■■□□□ 1.61
CDH5-204ENST00000563425 RLBP1P12271 317 aa25.12■■□□□ 1.61
CDH5-204ENST00000563425 RRS1Q15050 365 aaKnown RBP25.12■■□□□ 1.61
CDH5-204ENST00000563425 HMOX1P09601 288 aa25.11■■□□□ 1.61
CDH5-204ENST00000563425 NFE2L2Q16236 605 aa25.11■■□□□ 1.61
CDH5-204ENST00000563425 PHACTR3Q96KR7 559 aa25.1■■□□□ 1.61
CDH5-204ENST00000563425 SSH2Q76I76 1423 aa25.1■■□□□ 1.61
CDH5-204ENST00000563425 TNNQ9UQP3 1299 aa25.1■■□□□ 1.61
CDH5-204ENST00000563425 NUTM2FA1L443 756 aa25.09■■□□□ 1.61
CDH5-204ENST00000563425 IGHDP01880 384 aa25.08■■□□□ 1.6
CDH5-204ENST00000563425 ZKSCAN2Q63HK3 967 aa25.08■■□□□ 1.6
CDH5-204ENST00000563425 PEAK1Q9H792 1746 aa25.07■■□□□ 1.6
CDH5-204ENST00000563425 ERICH6Q7L0X2 663 aa25.06■■□□□ 1.6
CDH5-204ENST00000563425 IPO9Q96P70 1041 aaKnown RBP25.06■■□□□ 1.6
CDH5-204ENST00000563425 ZNF142P52746 1687 aaPredicted RBP25.06■■□□□ 1.6
CDH5-204ENST00000563425 SMC4Q9NTJ3 1288 aa25.06■■□□□ 1.6
CDH5-204ENST00000563425 USP31Q70CQ4 1352 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms