RNA–Protein interactions for RNA: ENST00000563318.1

FANCA-210, Transcript of FA complementation group A, humanhuman

TSL 5

Gene FANCA, Length 605 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-210ENST00000563318 NUTM2EB1AL46 878 aaPredicted RBP17.46■□□□□ 0.39
FANCA-210ENST00000563318 SRPK2P78362 688 aaKnown RBP17.46■□□□□ 0.39
FANCA-210ENST00000563318 NUTM2AQ8IVF1 878 aaPredicted RBP17.46■□□□□ 0.39
FANCA-210ENST00000563318 CPSF1Q10570 1443 aaKnown RBP17.46■□□□□ 0.39
FANCA-210ENST00000563318 CD163L1Q9NR16 1453 aa17.45■□□□□ 0.38
FANCA-210ENST00000563318 BRD4O60885 1362 aaPredicted RBP17.45■□□□□ 0.38
FANCA-210ENST00000563318 USP47Q96K76 1375 aa17.45■□□□□ 0.38
FANCA-210ENST00000563318 FNBP4Q8N3X1 1017 aaPredicted RBP17.45■□□□□ 0.38
FANCA-210ENST00000563318 NGDNQ8NEJ9 315 aaKnown RBP17.45■□□□□ 0.38
FANCA-210ENST00000563318 PUS7Q96PZ0 661 aaKnown RBP17.45■□□□□ 0.38
FANCA-210ENST00000563318 ATAD2Q6PL18 1390 aa17.44■□□□□ 0.38
FANCA-210ENST00000563318 SLIT2O94813 1529 aa17.44■□□□□ 0.38
FANCA-210ENST00000563318 ST20-MTHFSA0A0A6YYL1 179 aa17.44■□□□□ 0.38
FANCA-210ENST00000563318 USP6P35125 1406 aa17.44■□□□□ 0.38
FANCA-210ENST00000563318 NRKQ7Z2Y5 1582 aa17.44■□□□□ 0.38
FANCA-210ENST00000563318 AFF2P51816 1311 aa17.44■□□□□ 0.38
FANCA-210ENST00000563318 CABP1Q9NZU7 370 aa17.43■□□□□ 0.38
FANCA-210ENST00000563318 BCL9LQ86UU0 1499 aa17.43■□□□□ 0.38
FANCA-210ENST00000563318 AKAP12Q02952 1782 aa17.41■□□□□ 0.38
FANCA-210ENST00000563318 ADAMTS2O95450 1211 aa17.41■□□□□ 0.38
FANCA-210ENST00000563318 MEX3CQ5U5Q3 659 aaKnown RBP17.41■□□□□ 0.38
FANCA-210ENST00000563318 ZNF772Q68DY9 489 aaPredicted RBP17.41■□□□□ 0.38
FANCA-210ENST00000563318 PHRF1Q9P1Y6 1649 aaKnown RBP17.4■□□□□ 0.38
FANCA-210ENST00000563318 CABLES1Q8TDN4 633 aa17.4■□□□□ 0.38
FANCA-210ENST00000563318 C8orf37Q96NL8 207 aa17.4■□□□□ 0.38
FANCA-210ENST00000563318 USP19O94966 1318 aa17.4■□□□□ 0.38
FANCA-210ENST00000563318 ATRNO75882 1429 aa17.39■□□□□ 0.38
FANCA-210ENST00000563318 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.39■□□□□ 0.37
FANCA-210ENST00000563318 MYCNP04198 464 aaPredicted RBP17.39■□□□□ 0.37
FANCA-210ENST00000563318 MON2Q7Z3U7 1717 aa17.38■□□□□ 0.37
FANCA-210ENST00000563318 PIK3C2AO00443 1686 aa17.38■□□□□ 0.37
FANCA-210ENST00000563318 CDK12Q9NYV4 1490 aaPredicted RBP17.37■□□□□ 0.37
FANCA-210ENST00000563318 SLIT3O75094 1523 aa17.37■□□□□ 0.37
FANCA-210ENST00000563318 NWD2Q9ULI1 1742 aa17.35■□□□□ 0.37
FANCA-210ENST00000563318 SOCS7O14512 581 aa17.35■□□□□ 0.37
FANCA-210ENST00000563318 SLC24A1O60721 1099 aa17.35■□□□□ 0.37
FANCA-210ENST00000563318 NGLY1Q96IV0 654 aa17.35■□□□□ 0.37
FANCA-210ENST00000563318 PLCH1Q4KWH8 1693 aa17.35■□□□□ 0.37
FANCA-210ENST00000563318 USP54Q70EL1 1684 aa17.35■□□□□ 0.37
FANCA-210ENST00000563318 NRAPQ86VF7 1730 aa17.34■□□□□ 0.37
FANCA-210ENST00000563318 ZNF692Q9BU19 519 aaPredicted RBP17.34■□□□□ 0.37
FANCA-210ENST00000563318 NINLQ9Y2I6 1382 aa17.34■□□□□ 0.37
FANCA-210ENST00000563318 TTC21BQ7Z4L5 1316 aa17.33■□□□□ 0.36
FANCA-210ENST00000563318 PAK3O75914 559 aaPredicted RBP17.33■□□□□ 0.36
FANCA-210ENST00000563318 COL14A1Q05707 1796 aaKnown RBP17.33■□□□□ 0.36
FANCA-210ENST00000563318 A0A1W2PP64 1363 aa17.32■□□□□ 0.36
FANCA-210ENST00000563318 CPDO75976 1380 aa17.32■□□□□ 0.36
FANCA-210ENST00000563318 FAM83GA6ND36 823 aa17.32■□□□□ 0.36
FANCA-210ENST00000563318 LMOD2Q6P5Q4 547 aa17.32■□□□□ 0.36
FANCA-210ENST00000563318 SLC12A5Q9H2X9 1139 aa17.32■□□□□ 0.36
FANCA-210ENST00000563318 USP21Q9UK80 565 aa17.32■□□□□ 0.36
FANCA-210ENST00000563318 ATXN8OSP0DMR3 200 aa17.31■□□□□ 0.36
FANCA-210ENST00000563318 QTRT2Q9H974 415 aaKnown RBP17.31■□□□□ 0.36
FANCA-210ENST00000563318 LMO7Q8WWI1 1683 aa17.31■□□□□ 0.36
FANCA-210ENST00000563318 GLI3P10071 1580 aa17.31■□□□□ 0.36
FANCA-210ENST00000563318 RGS12O14924 1447 aa17.3■□□□□ 0.36
FANCA-210ENST00000563318 USP31Q70CQ4 1352 aa17.3■□□□□ 0.36
FANCA-210ENST00000563318 KTN1Q86UP2 1357 aaKnown RBP17.3■□□□□ 0.36
FANCA-210ENST00000563318 MYOM1P52179 1685 aa17.3■□□□□ 0.36
FANCA-210ENST00000563318 TTC21AQ8NDW8 1320 aa17.3■□□□□ 0.36
FANCA-210ENST00000563318 UNC5CLQ8IV45 518 aa17.3■□□□□ 0.36
FANCA-210ENST00000563318 ABTB2Q8N961 1025 aa17.3■□□□□ 0.36
FANCA-210ENST00000563318 EDC4Q6P2E9 1401 aaKnown RBP17.3■□□□□ 0.36
FANCA-210ENST00000563318 RBM6P78332 1123 aaKnown RBP17.29■□□□□ 0.36
FANCA-210ENST00000563318 TRPC5Q9UL62 973 aaPredicted RBP17.29■□□□□ 0.36
FANCA-210ENST00000563318 KIAA0232Q92628 1395 aa17.28■□□□□ 0.36
FANCA-210ENST00000563318 EP400Q96L91 3159 aa17.28■□□□□ 0.36
FANCA-210ENST00000563318 NFAT5O94916 1531 aa17.28■□□□□ 0.36
FANCA-210ENST00000563318 RXRBP28702 533 aa17.28■□□□□ 0.36
FANCA-210ENST00000563318 TMF1P82094 1093 aa17.28■□□□□ 0.36
FANCA-210ENST00000563318 NUTM2GQ5VZR2 741 aa17.28■□□□□ 0.36
FANCA-210ENST00000563318 GCP02774 474 aa17.27■□□□□ 0.36
FANCA-210ENST00000563318 NLRP13Q86W25 1043 aa17.27■□□□□ 0.36
FANCA-210ENST00000563318 ANKRD36BQ8N2N9 1353 aa17.27■□□□□ 0.35
FANCA-210ENST00000563318 HSPA5P11021 654 aaKnown RBP17.26■□□□□ 0.35
FANCA-210ENST00000563318 VPS72Q15906 364 aa17.26■□□□□ 0.35
FANCA-210ENST00000563318 OVOS2A0A0J9YW53 1432 aa17.26■□□□□ 0.35
FANCA-210ENST00000563318 OVOS2Q6IE36 1432 aa17.26■□□□□ 0.35
FANCA-210ENST00000563318 CAMTA1Q9Y6Y1 1673 aa17.25■□□□□ 0.35
FANCA-210ENST00000563318 COL18A1P39060 1754 aa17.25■□□□□ 0.35
FANCA-210ENST00000563318 HAP1P54257 671 aaPredicted RBP17.24■□□□□ 0.35
FANCA-210ENST00000563318 EIF4G2P78344 907 aaKnown RBP eCLIP17.24■□□□□ 0.35
FANCA-210ENST00000563318 GJD4Q96KN9 370 aaPredicted RBP17.24■□□□□ 0.35
FANCA-210ENST00000563318 PLEKHG5O94827 1062 aa17.23■□□□□ 0.35
FANCA-210ENST00000563318 NLRP6P59044 892 aa17.23■□□□□ 0.35
FANCA-210ENST00000563318 TMC1Q8TDI8 760 aa17.23■□□□□ 0.35
FANCA-210ENST00000563318 BTG4Q9NY30 223 aa17.23■□□□□ 0.35
FANCA-210ENST00000563318 TERF2IPQ9NYB0 399 aa17.23■□□□□ 0.35
FANCA-210ENST00000563318 ONECUT3O60422 494 aaPredicted RBP17.22■□□□□ 0.35
FANCA-210ENST00000563318 CDCA8Q53HL2 280 aa17.22■□□□□ 0.35
FANCA-210ENST00000563318 HDGFL2Q7Z4V5 671 aaPredicted RBP17.22■□□□□ 0.35
FANCA-210ENST00000563318 PRDM11Q9NQV5 511 aa17.22■□□□□ 0.35
FANCA-210ENST00000563318 ZRANB1Q9UGI0 708 aa17.22■□□□□ 0.35
FANCA-210ENST00000563318 ABCC6O95255 1503 aa17.21■□□□□ 0.35
FANCA-210ENST00000563318 AATKQ6ZMQ8 1374 aa17.21■□□□□ 0.35
FANCA-210ENST00000563318 ZC3H6P61129 1189 aaKnown RBP17.21■□□□□ 0.35
FANCA-210ENST00000563318 NME9Q86XW9 330 aa17.21■□□□□ 0.35
FANCA-210ENST00000563318 DCAF8L1A6NGE4 600 aa17.2■□□□□ 0.34
FANCA-210ENST00000563318 CHRNA2Q15822 529 aa17.2■□□□□ 0.34
FANCA-210ENST00000563318 ARHGEF25Q86VW2 580 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms