RNA–Protein interactions for RNA: ENST00000563273.5

NSMCE1-204, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-204ENST00000563273 RALGAPBQ86X10 1494 aa17.44■□□□□ 0.38
NSMCE1-204ENST00000563273 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.42■□□□□ 0.38
NSMCE1-204ENST00000563273 PPIP5K1Q6PFW1 1433 aa17.42■□□□□ 0.38
NSMCE1-204ENST00000563273 GJD4Q96KN9 370 aaPredicted RBP17.42■□□□□ 0.38
NSMCE1-204ENST00000563273 CABP2Q9NPB3 220 aa17.42■□□□□ 0.38
NSMCE1-204ENST00000563273 QRICH2Q9H0J4 1663 aa17.42■□□□□ 0.38
NSMCE1-204ENST00000563273 PAK3O75914 559 aaPredicted RBP17.41■□□□□ 0.38
NSMCE1-204ENST00000563273 CLSPNQ9HAW4 1339 aa17.41■□□□□ 0.38
NSMCE1-204ENST00000563273 ABCA3Q99758 1704 aa17.41■□□□□ 0.38
NSMCE1-204ENST00000563273 VPS72Q15906 364 aa17.4■□□□□ 0.38
NSMCE1-204ENST00000563273 UPF1Q92900 1129 aaKnown RBP eCLIP17.4■□□□□ 0.38
NSMCE1-204ENST00000563273 CARD11Q9BXL7 1154 aa17.4■□□□□ 0.38
NSMCE1-204ENST00000563273 FAM83GA6ND36 823 aa17.39■□□□□ 0.37
NSMCE1-204ENST00000563273 ATAD2Q6PL18 1390 aa17.38■□□□□ 0.37
NSMCE1-204ENST00000563273 NWD2Q9ULI1 1742 aa17.38■□□□□ 0.37
NSMCE1-204ENST00000563273 CABP1Q9NZU7 370 aa17.37■□□□□ 0.37
NSMCE1-204ENST00000563273 TIMELESSQ9UNS1 1208 aa17.36■□□□□ 0.37
NSMCE1-204ENST00000563273 USP19O94966 1318 aa17.36■□□□□ 0.37
NSMCE1-204ENST00000563273 USP6P35125 1406 aa17.36■□□□□ 0.37
NSMCE1-204ENST00000563273 CRYBG1Q9Y4K1 1723 aa17.35■□□□□ 0.37
NSMCE1-204ENST00000563273 ONECUT3O60422 494 aaPredicted RBP17.35■□□□□ 0.37
NSMCE1-204ENST00000563273 PUS7Q96PZ0 661 aaKnown RBP17.35■□□□□ 0.37
NSMCE1-204ENST00000563273 ZNF692Q9BU19 519 aaPredicted RBP17.35■□□□□ 0.37
NSMCE1-204ENST00000563273 SSH2Q76I76 1423 aa17.35■□□□□ 0.37
NSMCE1-204ENST00000563273 SLC24A1O60721 1099 aa17.34■□□□□ 0.37
NSMCE1-204ENST00000563273 ABTB2Q8N961 1025 aa17.34■□□□□ 0.37
NSMCE1-204ENST00000563273 COL14A1Q05707 1796 aaKnown RBP17.33■□□□□ 0.37
NSMCE1-204ENST00000563273 GLI3P10071 1580 aa17.33■□□□□ 0.37
NSMCE1-204ENST00000563273 CPDO75976 1380 aa17.33■□□□□ 0.36
NSMCE1-204ENST00000563273 NLRP13Q86W25 1043 aa17.33■□□□□ 0.36
NSMCE1-204ENST00000563273 PRDM11Q9NQV5 511 aa17.33■□□□□ 0.36
NSMCE1-204ENST00000563273 BTG4Q9NY30 223 aa17.33■□□□□ 0.36
NSMCE1-204ENST00000563273 PLCH1Q4KWH8 1693 aa17.32■□□□□ 0.36
NSMCE1-204ENST00000563273 KIAA0232Q92628 1395 aa17.32■□□□□ 0.36
NSMCE1-204ENST00000563273 PLEKHG5O94827 1062 aa17.32■□□□□ 0.36
NSMCE1-204ENST00000563273 CPSF1Q10570 1443 aaKnown RBP17.31■□□□□ 0.36
NSMCE1-204ENST00000563273 PHRF1Q9P1Y6 1649 aaKnown RBP17.29■□□□□ 0.36
NSMCE1-204ENST00000563273 NUTM2GQ5VZR2 741 aa17.29■□□□□ 0.36
NSMCE1-204ENST00000563273 NRAPQ86VF7 1730 aa17.29■□□□□ 0.36
NSMCE1-204ENST00000563273 NRKQ7Z2Y5 1582 aa17.28■□□□□ 0.36
NSMCE1-204ENST00000563273 SPATA31A5Q5VU36 1347 aa17.28■□□□□ 0.36
NSMCE1-204ENST00000563273 SPATA31A7Q8IWB4 1347 aa17.28■□□□□ 0.36
NSMCE1-204ENST00000563273 TTC21AQ8NDW8 1320 aa17.28■□□□□ 0.36
NSMCE1-204ENST00000563273 GCP02774 474 aa17.28■□□□□ 0.36
NSMCE1-204ENST00000563273 CCDC9Q9Y3X0 531 aaKnown RBP17.28■□□□□ 0.36
NSMCE1-204ENST00000563273 CCDC125Q86Z20 511 aa17.27■□□□□ 0.36
NSMCE1-204ENST00000563273 SEPT12Q8IYM1 358 aa17.27■□□□□ 0.36
NSMCE1-204ENST00000563273 TESK2Q96S53 571 aa17.27■□□□□ 0.36
NSMCE1-204ENST00000563273 TTC21BQ7Z4L5 1316 aa17.26■□□□□ 0.35
NSMCE1-204ENST00000563273 NLRP6P59044 892 aa17.26■□□□□ 0.35
NSMCE1-204ENST00000563273 ZC3H6P61129 1189 aaKnown RBP17.26■□□□□ 0.35
NSMCE1-204ENST00000563273 NINLQ9Y2I6 1382 aa17.26■□□□□ 0.35
NSMCE1-204ENST00000563273 SLIT3O75094 1523 aa17.26■□□□□ 0.35
NSMCE1-204ENST00000563273 CHRNA2Q15822 529 aa17.25■□□□□ 0.35
NSMCE1-204ENST00000563273 ST20-MTHFSA0A0A6YYL1 179 aa17.24■□□□□ 0.35
NSMCE1-204ENST00000563273 PCGF6Q9BYE7 350 aa17.24■□□□□ 0.35
NSMCE1-204ENST00000563273 KTN1Q86UP2 1357 aaKnown RBP17.24■□□□□ 0.35
NSMCE1-204ENST00000563273 EP400Q96L91 3159 aa17.24■□□□□ 0.35
NSMCE1-204ENST00000563273 SPATA31A1Q5TZJ5 1347 aa17.23■□□□□ 0.35
NSMCE1-204ENST00000563273 AATKQ6ZMQ8 1374 aa17.23■□□□□ 0.35
NSMCE1-204ENST00000563273 FAM98CQ17RN3 349 aaKnown RBP17.22■□□□□ 0.35
NSMCE1-204ENST00000563273 KCNH5Q8NCM2 988 aa17.22■□□□□ 0.35
NSMCE1-204ENST00000563273 CD163L1Q9NR16 1453 aa17.22■□□□□ 0.35
NSMCE1-204ENST00000563273 PIK3C2AO00443 1686 aa17.21■□□□□ 0.35
NSMCE1-204ENST00000563273 LMO7Q8WWI1 1683 aa17.21■□□□□ 0.35
NSMCE1-204ENST00000563273 USP31Q70CQ4 1352 aa17.21■□□□□ 0.35
NSMCE1-204ENST00000563273 USP47Q96K76 1375 aa17.21■□□□□ 0.35
NSMCE1-204ENST00000563273 KRT27Q7Z3Y8 459 aa17.21■□□□□ 0.35
NSMCE1-204ENST00000563273 HDGFL2Q7Z4V5 671 aaPredicted RBP17.21■□□□□ 0.35
NSMCE1-204ENST00000563273 TERF2IPQ9NYB0 399 aa17.21■□□□□ 0.35
NSMCE1-204ENST00000563273 AKAP12Q02952 1782 aa17.2■□□□□ 0.34
NSMCE1-204ENST00000563273 CAMTA1Q9Y6Y1 1673 aa17.2■□□□□ 0.34
NSMCE1-204ENST00000563273 BARGINQ6ZT62 677 aa17.2■□□□□ 0.34
NSMCE1-204ENST00000563273 EDC4Q6P2E9 1401 aaKnown RBP17.2■□□□□ 0.34
NSMCE1-204ENST00000563273 EVA1CP58658 441 aa17.19■□□□□ 0.34
NSMCE1-204ENST00000563273 SLC12A5Q9H2X9 1139 aa17.19■□□□□ 0.34
NSMCE1-204ENST00000563273 THRAP3Q9Y2W1 955 aaKnown RBP17.19■□□□□ 0.34
NSMCE1-204ENST00000563273 BLMP54132 1417 aaPredicted RBP17.19■□□□□ 0.34
NSMCE1-204ENST00000563273 THSD7AQ9UPZ6 1657 aa17.18■□□□□ 0.34
NSMCE1-204ENST00000563273 ARHGEF25Q86VW2 580 aa17.18■□□□□ 0.34
NSMCE1-204ENST00000563273 TMC1Q8TDI8 760 aa17.18■□□□□ 0.34
NSMCE1-204ENST00000563273 STRN4Q9NRL3 753 aa17.18■□□□□ 0.34
NSMCE1-204ENST00000563273 COL5A2P05997 1499 aaPredicted RBP17.18■□□□□ 0.34
NSMCE1-204ENST00000563273 TMF1P82094 1093 aa17.17■□□□□ 0.34
NSMCE1-204ENST00000563273 MON2Q7Z3U7 1717 aa17.17■□□□□ 0.34
NSMCE1-204ENST00000563273 A0A1W2PP64 1363 aa17.16■□□□□ 0.34
NSMCE1-204ENST00000563273 A0A0G2JS52 829 aa17.16■□□□□ 0.34
NSMCE1-204ENST00000563273 MYT1Q01538 1121 aa17.16■□□□□ 0.34
NSMCE1-204ENST00000563273 CDCA8Q53HL2 280 aa17.16■□□□□ 0.34
NSMCE1-204ENST00000563273 LARP1Q6PKG0 1096 aaKnown RBP17.16■□□□□ 0.34
NSMCE1-204ENST00000563273 TCP11L2Q8N4U5 519 aa17.16■□□□□ 0.34
NSMCE1-204ENST00000563273 ABCC6O95255 1503 aa17.16■□□□□ 0.34
NSMCE1-204ENST00000563273 CRB1P82279 1406 aa17.14■□□□□ 0.33
NSMCE1-204ENST00000563273 USP54Q70EL1 1684 aa17.14■□□□□ 0.33
NSMCE1-204ENST00000563273 NFAT5O94916 1531 aa17.14■□□□□ 0.33
NSMCE1-204ENST00000563273 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.13■□□□□ 0.33
NSMCE1-204ENST00000563273 CCER1Q8TC90 406 aaPredicted RBP17.13■□□□□ 0.33
NSMCE1-204ENST00000563273 ANKRD36BQ8N2N9 1353 aa17.13■□□□□ 0.33
NSMCE1-204ENST00000563273 BRWD3Q6RI45 1802 aa17.12■□□□□ 0.33
NSMCE1-204ENST00000563273 NME9Q86XW9 330 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms