RNA–Protein interactions for RNA: ENST00000562948.1

SCAPER-205, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 2

Gene SCAPER, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-205ENST00000562948 POLR3AO14802 1390 aaPredicted RBP9.75□□□□□ -0.85
SCAPER-205ENST00000562948 ALS2Q96Q42 1657 aa9.75□□□□□ -0.85
SCAPER-205ENST00000562948 NME9Q86XW9 330 aa9.74□□□□□ -0.85
SCAPER-205ENST00000562948 RGPD5Q99666 1765 aa9.74□□□□□ -0.85
SCAPER-205ENST00000562948 XPCQ01831 940 aaPredicted RBP9.74□□□□□ -0.85
SCAPER-205ENST00000562948 GGNBP2Q9H3C7 697 aa9.74□□□□□ -0.85
SCAPER-205ENST00000562948 USP6P35125 1406 aa9.74□□□□□ -0.85
SCAPER-205ENST00000562948 C1orf167Q5SNV9 1468 aa9.74□□□□□ -0.85
SCAPER-205ENST00000562948 USP54Q70EL1 1684 aa9.73□□□□□ -0.85
SCAPER-205ENST00000562948 RGPD2P0DJD1 1756 aa9.73□□□□□ -0.85
SCAPER-205ENST00000562948 CCDC61Q9Y6R9 512 aa9.73□□□□□ -0.85
SCAPER-205ENST00000562948 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.73□□□□□ -0.85
SCAPER-205ENST00000562948 PUS7Q96PZ0 661 aaKnown RBP9.73□□□□□ -0.85
SCAPER-205ENST00000562948 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.73□□□□□ -0.85
SCAPER-205ENST00000562948 COL3A1P02461 1466 aaPredicted RBP9.72□□□□□ -0.85
SCAPER-205ENST00000562948 TNNT2P45379 298 aaPredicted RBP9.72□□□□□ -0.85
SCAPER-205ENST00000562948 PLEKHG3A1L390 1219 aa9.72□□□□□ -0.85
SCAPER-205ENST00000562948 LTN1O94822 1766 aa9.72□□□□□ -0.85
SCAPER-205ENST00000562948 ATAD2Q6PL18 1390 aa9.71□□□□□ -0.85
SCAPER-205ENST00000562948 MED1Q15648 1581 aaPredicted RBP9.71□□□□□ -0.85
SCAPER-205ENST00000562948 PPP2R1AP30153 589 aa9.71□□□□□ -0.85
SCAPER-205ENST00000562948 PROSER2Q86WR7 435 aaPredicted RBP9.71□□□□□ -0.85
SCAPER-205ENST00000562948 OVOS2A0A0J9YW53 1432 aa9.71□□□□□ -0.86
SCAPER-205ENST00000562948 OVOS2Q6IE36 1432 aa9.71□□□□□ -0.86
SCAPER-205ENST00000562948 KTN1Q86UP2 1357 aaKnown RBP9.71□□□□□ -0.86
SCAPER-205ENST00000562948 PXDNQ92626 1479 aa9.7□□□□□ -0.86
SCAPER-205ENST00000562948 EIF5BO60841 1220 aaKnown RBP9.7□□□□□ -0.86
SCAPER-205ENST00000562948 PNISRQ8TF01 805 aaKnown RBP9.7□□□□□ -0.86
SCAPER-205ENST00000562948 NPC1L1Q9UHC9 1359 aa9.7□□□□□ -0.86
SCAPER-205ENST00000562948 NBR1Q14596 966 aa9.7□□□□□ -0.86
SCAPER-205ENST00000562948 ROBO1Q9Y6N7 1651 aa9.69□□□□□ -0.86
SCAPER-205ENST00000562948 ABCA3Q99758 1704 aa9.69□□□□□ -0.86
SCAPER-205ENST00000562948 FOXO3O43524 673 aa9.69□□□□□ -0.86
SCAPER-205ENST00000562948 NUTM2GQ5VZR2 741 aa9.69□□□□□ -0.86
SCAPER-205ENST00000562948 RTN4Q9NQC3 1192 aaKnown RBP9.69□□□□□ -0.86
SCAPER-205ENST00000562948 ANKARQ7Z5J8 1434 aa9.69□□□□□ -0.86
SCAPER-205ENST00000562948 ANP32CO43423 234 aa9.69□□□□□ -0.86
SCAPER-205ENST00000562948 NHSL1Q5SYE7 1610 aa9.69□□□□□ -0.86
SCAPER-205ENST00000562948 EDC4Q6P2E9 1401 aaKnown RBP9.69□□□□□ -0.86
SCAPER-205ENST00000562948 NFAT5O94916 1531 aa9.68□□□□□ -0.86
SCAPER-205ENST00000562948 C19orf44Q9H6X5 657 aa9.68□□□□□ -0.86
SCAPER-205ENST00000562948 RGPD1P0DJD0 1748 aa9.68□□□□□ -0.86
SCAPER-205ENST00000562948 TTC21BQ7Z4L5 1316 aa9.67□□□□□ -0.86
SCAPER-205ENST00000562948 ESCO1Q5FWF5 840 aa9.67□□□□□ -0.86
SCAPER-205ENST00000562948 BRINP3Q76B58 766 aa9.67□□□□□ -0.86
SCAPER-205ENST00000562948 KNSTRNQ9Y448 316 aa9.67□□□□□ -0.86
SCAPER-205ENST00000562948 MYBBP1AQ9BQG0 1328 aaKnown RBP9.67□□□□□ -0.86
SCAPER-205ENST00000562948 NINLQ9Y2I6 1382 aa9.66□□□□□ -0.86
SCAPER-205ENST00000562948 PHRF1Q9P1Y6 1649 aaKnown RBP9.66□□□□□ -0.86
SCAPER-205ENST00000562948 COL18A1P39060 1754 aa9.66□□□□□ -0.86
SCAPER-205ENST00000562948 RRS1Q15050 365 aaKnown RBP9.66□□□□□ -0.86
SCAPER-205ENST00000562948 CDCA8Q53HL2 280 aa9.66□□□□□ -0.86
SCAPER-205ENST00000562948 EMILIN1Q9Y6C2 1016 aa9.66□□□□□ -0.86
SCAPER-205ENST00000562948 CCER2I3L3R5 266 aa9.66□□□□□ -0.86
SCAPER-205ENST00000562948 RTL5Q5HYW3 569 aaPredicted RBP9.66□□□□□ -0.86
SCAPER-205ENST00000562948 POLKQ9UBT6 870 aa9.66□□□□□ -0.86
SCAPER-205ENST00000562948 DCCP43146 1447 aa9.66□□□□□ -0.86
SCAPER-205ENST00000562948 KIF1AQ12756 1690 aa9.65□□□□□ -0.86
SCAPER-205ENST00000562948 IL27Q8NEV9 243 aa9.65□□□□□ -0.87
SCAPER-205ENST00000562948 DLG5Q8TDM6 1919 aa9.64□□□□□ -0.87
SCAPER-205ENST00000562948 PNPLA6Q8IY17 1366 aa9.64□□□□□ -0.87
SCAPER-205ENST00000562948 MTHFSP49914 203 aa9.64□□□□□ -0.87
SCAPER-205ENST00000562948 PHF8Q9UPP1 1060 aa9.64□□□□□ -0.87
SCAPER-205ENST00000562948 ADAMTS8Q9UP79 889 aa9.64□□□□□ -0.87
SCAPER-205ENST00000562948 SMG6Q86US8 1419 aaKnown RBP9.64□□□□□ -0.87
SCAPER-205ENST00000562948 NCOA3Q9Y6Q9 1424 aa9.64□□□□□ -0.87
SCAPER-205ENST00000562948 FAM9BQ8IZU0 186 aa9.64□□□□□ -0.87
SCAPER-205ENST00000562948 MRS2Q9HD23 443 aa9.64□□□□□ -0.87
SCAPER-205ENST00000562948 USP31Q70CQ4 1352 aa9.63□□□□□ -0.87
SCAPER-205ENST00000562948 CGNL1Q0VF96 1302 aa9.63□□□□□ -0.87
SCAPER-205ENST00000562948 SLAIN2Q9P270 581 aa9.63□□□□□ -0.87
SCAPER-205ENST00000562948 DMRT2Q9Y5R5 561 aa9.63□□□□□ -0.87
SCAPER-205ENST00000562948 CABLES1Q8TDN4 633 aa9.63□□□□□ -0.87
SCAPER-205ENST00000562948 PKNOX2Q96KN3 472 aa9.63□□□□□ -0.87
SCAPER-205ENST00000562948 RALBP1Q15311 655 aa9.62□□□□□ -0.87
SCAPER-205ENST00000562948 AXIN2Q9Y2T1 843 aa9.62□□□□□ -0.87
SCAPER-205ENST00000562948 BRD4O60885 1362 aaPredicted RBP9.62□□□□□ -0.87
SCAPER-205ENST00000562948 SLIT3O75094 1523 aa9.62□□□□□ -0.87
SCAPER-205ENST00000562948 COL16A1Q07092 1604 aaPredicted RBP9.62□□□□□ -0.87
SCAPER-205ENST00000562948 SOX12O15370 315 aa9.62□□□□□ -0.87
SCAPER-205ENST00000562948 TERF2IPQ9NYB0 399 aa9.62□□□□□ -0.87
SCAPER-205ENST00000562948 C14orf37Q86TY3 774 aa9.61□□□□□ -0.87
SCAPER-205ENST00000562948 PLEKHG5O94827 1062 aa9.61□□□□□ -0.87
SCAPER-205ENST00000562948 NLRP13Q86W25 1043 aa9.61□□□□□ -0.87
SCAPER-205ENST00000562948 HSP90AB2PQ58FF8 381 aa9.6□□□□□ -0.87
SCAPER-205ENST00000562948 NOP58Q9Y2X3 529 aaKnown RBP9.6□□□□□ -0.87
SCAPER-205ENST00000562948 BLMP54132 1417 aaPredicted RBP9.6□□□□□ -0.87
SCAPER-205ENST00000562948 VIRMAQ69YN4 1812 aaKnown RBP9.6□□□□□ -0.87
SCAPER-205ENST00000562948 NGDNQ8NEJ9 315 aaKnown RBP9.6□□□□□ -0.87
SCAPER-205ENST00000562948 MSH6P52701 1360 aa9.6□□□□□ -0.87
SCAPER-205ENST00000562948 MORC1Q86VD1 984 aa9.6□□□□□ -0.87
SCAPER-205ENST00000562948 MAP3K19Q56UN5 1328 aa9.59□□□□□ -0.87
SCAPER-205ENST00000562948 IQSEC2Q5JU85 1478 aa9.59□□□□□ -0.87
SCAPER-205ENST00000562948 SLC24A1O60721 1099 aa9.59□□□□□ -0.87
SCAPER-205ENST00000562948 HDGFL2Q7Z4V5 671 aaPredicted RBP9.59□□□□□ -0.87
SCAPER-205ENST00000562948 SPINK5Q9NQ38 1064 aaPredicted RBP9.59□□□□□ -0.87
SCAPER-205ENST00000562948 CCDC146Q8IYE0 955 aa9.58□□□□□ -0.88
SCAPER-205ENST00000562948 LMO7Q8WWI1 1683 aa9.58□□□□□ -0.88
SCAPER-205ENST00000562948 SOS2Q07890 1332 aaPredicted RBP9.58□□□□□ -0.88
SCAPER-205ENST00000562948 NSD2O96028 1365 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms