RNA–Protein interactions for RNA: ENST00000562946.5

TMEM87A-205, Transcript of transmembrane protein 87A, humanhuman

TSL 2

Gene TMEM87A, Length 1,430 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM87A-205ENST00000562946 NGDNQ8NEJ9 315 aaKnown RBP12.52□□□□□ -0.41
TMEM87A-205ENST00000562946 NGLY1Q96IV0 654 aa12.52□□□□□ -0.41
TMEM87A-205ENST00000562946 POLR3AO14802 1390 aaPredicted RBP12.51□□□□□ -0.41
TMEM87A-205ENST00000562946 CLSPNQ9HAW4 1339 aa12.51□□□□□ -0.41
TMEM87A-205ENST00000562946 PLEKHG3A1L390 1219 aa12.51□□□□□ -0.41
TMEM87A-205ENST00000562946 SRPK2P78362 688 aaKnown RBP12.51□□□□□ -0.41
TMEM87A-205ENST00000562946 CARD11Q9BXL7 1154 aa12.51□□□□□ -0.41
TMEM87A-205ENST00000562946 ARHGEF10O15013 1369 aa12.5□□□□□ -0.41
TMEM87A-205ENST00000562946 FNBP4Q8N3X1 1017 aaPredicted RBP12.5□□□□□ -0.41
TMEM87A-205ENST00000562946 CABP2Q9NPB3 220 aa12.5□□□□□ -0.41
TMEM87A-205ENST00000562946 CRYBG1Q9Y4K1 1723 aa12.5□□□□□ -0.41
TMEM87A-205ENST00000562946 ACEP12821 1306 aa12.49□□□□□ -0.41
TMEM87A-205ENST00000562946 LMOD2Q6P5Q4 547 aa12.49□□□□□ -0.41
TMEM87A-205ENST00000562946 CABLES1Q8TDN4 633 aa12.49□□□□□ -0.41
TMEM87A-205ENST00000562946 EVC2Q86UK5 1308 aa12.48□□□□□ -0.41
TMEM87A-205ENST00000562946 PPIP5K1Q6PFW1 1433 aa12.48□□□□□ -0.41
TMEM87A-205ENST00000562946 RXRBP28702 533 aa12.47□□□□□ -0.41
TMEM87A-205ENST00000562946 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.47□□□□□ -0.41
TMEM87A-205ENST00000562946 QTRT2Q9H974 415 aaKnown RBP12.47□□□□□ -0.41
TMEM87A-205ENST00000562946 TIMELESSQ9UNS1 1208 aa12.47□□□□□ -0.41
TMEM87A-205ENST00000562946 SBNO2Q9Y2G9 1366 aa12.47□□□□□ -0.41
TMEM87A-205ENST00000562946 BCL9LQ86UU0 1499 aa12.47□□□□□ -0.41
TMEM87A-205ENST00000562946 PAK3O75914 559 aaPredicted RBP12.46□□□□□ -0.41
TMEM87A-205ENST00000562946 USP21Q9UK80 565 aa12.46□□□□□ -0.41
TMEM87A-205ENST00000562946 AKAP12Q02952 1782 aa12.46□□□□□ -0.42
TMEM87A-205ENST00000562946 SLIT2O94813 1529 aa12.46□□□□□ -0.42
TMEM87A-205ENST00000562946 CABP1Q9NZU7 370 aa12.45□□□□□ -0.42
TMEM87A-205ENST00000562946 NWD2Q9ULI1 1742 aa12.45□□□□□ -0.42
TMEM87A-205ENST00000562946 PLCH1Q4KWH8 1693 aa12.45□□□□□ -0.42
TMEM87A-205ENST00000562946 PLEKHG5O94827 1062 aa12.45□□□□□ -0.42
TMEM87A-205ENST00000562946 HAP1P54257 671 aaPredicted RBP12.45□□□□□ -0.42
TMEM87A-205ENST00000562946 CDK12Q9NYV4 1490 aaPredicted RBP12.44□□□□□ -0.42
TMEM87A-205ENST00000562946 ATRNO75882 1429 aa12.44□□□□□ -0.42
TMEM87A-205ENST00000562946 RBM6P78332 1123 aaKnown RBP12.44□□□□□ -0.42
TMEM87A-205ENST00000562946 FKBP8Q14318 412 aa12.44□□□□□ -0.42
TMEM87A-205ENST00000562946 TRPC5Q9UL62 973 aaPredicted RBP12.44□□□□□ -0.42
TMEM87A-205ENST00000562946 PHRF1Q9P1Y6 1649 aaKnown RBP12.43□□□□□ -0.42
TMEM87A-205ENST00000562946 FAM83GA6ND36 823 aa12.43□□□□□ -0.42
TMEM87A-205ENST00000562946 BRD4O60885 1362 aaPredicted RBP12.42□□□□□ -0.42
TMEM87A-205ENST00000562946 ATAD2Q6PL18 1390 aa12.42□□□□□ -0.42
TMEM87A-205ENST00000562946 UNC5CLQ8IV45 518 aa12.42□□□□□ -0.42
TMEM87A-205ENST00000562946 CCER1Q8TC90 406 aaPredicted RBP12.42□□□□□ -0.42
TMEM87A-205ENST00000562946 TESK2Q96S53 571 aa12.42□□□□□ -0.42
TMEM87A-205ENST00000562946 USP6P35125 1406 aa12.42□□□□□ -0.42
TMEM87A-205ENST00000562946 SSH2Q76I76 1423 aa12.42□□□□□ -0.42
TMEM87A-205ENST00000562946 COL14A1Q05707 1796 aaKnown RBP12.41□□□□□ -0.42
TMEM87A-205ENST00000562946 ST20-MTHFSA0A0A6YYL1 179 aa12.41□□□□□ -0.42
TMEM87A-205ENST00000562946 NUTM2GQ5VZR2 741 aa12.41□□□□□ -0.42
TMEM87A-205ENST00000562946 ABTB2Q8N961 1025 aa12.41□□□□□ -0.42
TMEM87A-205ENST00000562946 NRAPQ86VF7 1730 aa12.41□□□□□ -0.42
TMEM87A-205ENST00000562946 RGS12O14924 1447 aa12.4□□□□□ -0.42
TMEM87A-205ENST00000562946 CPSF1Q10570 1443 aaKnown RBP12.4□□□□□ -0.42
TMEM87A-205ENST00000562946 MON2Q7Z3U7 1717 aa12.4□□□□□ -0.42
TMEM87A-205ENST00000562946 GJD4Q96KN9 370 aaPredicted RBP12.39□□□□□ -0.43
TMEM87A-205ENST00000562946 PUS7Q96PZ0 661 aaKnown RBP12.39□□□□□ -0.43
TMEM87A-205ENST00000562946 ZNF692Q9BU19 519 aaPredicted RBP12.39□□□□□ -0.43
TMEM87A-205ENST00000562946 PIK3C2AO00443 1686 aa12.39□□□□□ -0.43
TMEM87A-205ENST00000562946 GLI3P10071 1580 aa12.39□□□□□ -0.43
TMEM87A-205ENST00000562946 NRKQ7Z2Y5 1582 aa12.39□□□□□ -0.43
TMEM87A-205ENST00000562946 USP19O94966 1318 aa12.38□□□□□ -0.43
TMEM87A-205ENST00000562946 USP47Q96K76 1375 aa12.38□□□□□ -0.43
TMEM87A-205ENST00000562946 BRWD3Q6RI45 1802 aa12.38□□□□□ -0.43
TMEM87A-205ENST00000562946 CD163L1Q9NR16 1453 aa12.37□□□□□ -0.43
TMEM87A-205ENST00000562946 NLRP13Q86W25 1043 aa12.37□□□□□ -0.43
TMEM87A-205ENST00000562946 SLC24A1O60721 1099 aa12.37□□□□□ -0.43
TMEM87A-205ENST00000562946 VPS72Q15906 364 aa12.37□□□□□ -0.43
TMEM87A-205ENST00000562946 SLC12A5Q9H2X9 1139 aa12.37□□□□□ -0.43
TMEM87A-205ENST00000562946 BTG4Q9NY30 223 aa12.37□□□□□ -0.43
TMEM87A-205ENST00000562946 TTC21BQ7Z4L5 1316 aa12.36□□□□□ -0.43
TMEM87A-205ENST00000562946 KIAA0232Q92628 1395 aa12.36□□□□□ -0.43
TMEM87A-205ENST00000562946 GCP02774 474 aa12.36□□□□□ -0.43
TMEM87A-205ENST00000562946 ZC3H6P61129 1189 aaKnown RBP12.36□□□□□ -0.43
TMEM87A-205ENST00000562946 PRDM11Q9NQV5 511 aa12.36□□□□□ -0.43
TMEM87A-205ENST00000562946 KTN1Q86UP2 1357 aaKnown RBP12.35□□□□□ -0.43
TMEM87A-205ENST00000562946 SLIT3O75094 1523 aa12.35□□□□□ -0.43
TMEM87A-205ENST00000562946 NLRP6P59044 892 aa12.35□□□□□ -0.43
TMEM87A-205ENST00000562946 ZNF219Q9P2Y4 722 aaPredicted RBP12.35□□□□□ -0.43
TMEM87A-205ENST00000562946 LMO7Q8WWI1 1683 aa12.34□□□□□ -0.43
TMEM87A-205ENST00000562946 CHRNA2Q15822 529 aa12.34□□□□□ -0.43
TMEM87A-205ENST00000562946 TMC1Q8TDI8 760 aa12.34□□□□□ -0.43
TMEM87A-205ENST00000562946 TTC21AQ8NDW8 1320 aa12.34□□□□□ -0.43
TMEM87A-205ENST00000562946 CPDO75976 1380 aa12.34□□□□□ -0.43
TMEM87A-205ENST00000562946 USP54Q70EL1 1684 aa12.33□□□□□ -0.43
TMEM87A-205ENST00000562946 ONECUT3O60422 494 aaPredicted RBP12.33□□□□□ -0.44
TMEM87A-205ENST00000562946 UPF1Q92900 1129 aaKnown RBP eCLIP12.33□□□□□ -0.44
TMEM87A-205ENST00000562946 CAMTA1Q9Y6Y1 1673 aa12.33□□□□□ -0.44
TMEM87A-205ENST00000562946 COL18A1P39060 1754 aa12.33□□□□□ -0.44
TMEM87A-205ENST00000562946 RGPD5Q99666 1765 aa12.33□□□□□ -0.44
TMEM87A-205ENST00000562946 A0A1W2PP64 1363 aa12.32□□□□□ -0.44
TMEM87A-205ENST00000562946 TMF1P82094 1093 aa12.32□□□□□ -0.44
TMEM87A-205ENST00000562946 NINLQ9Y2I6 1382 aa12.31□□□□□ -0.44
TMEM87A-205ENST00000562946 HDGFL2Q7Z4V5 671 aaPredicted RBP12.31□□□□□ -0.44
TMEM87A-205ENST00000562946 TERF2IPQ9NYB0 399 aa12.31□□□□□ -0.44
TMEM87A-205ENST00000562946 CCDC9Q9Y3X0 531 aaKnown RBP12.31□□□□□ -0.44
TMEM87A-205ENST00000562946 SPATA31A5Q5VU36 1347 aa12.3□□□□□ -0.44
TMEM87A-205ENST00000562946 SPATA31A7Q8IWB4 1347 aa12.3□□□□□ -0.44
TMEM87A-205ENST00000562946 EDC4Q6P2E9 1401 aaKnown RBP12.3□□□□□ -0.44
TMEM87A-205ENST00000562946 USP31Q70CQ4 1352 aa12.3□□□□□ -0.44
TMEM87A-205ENST00000562946 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.29□□□□□ -0.44
TMEM87A-205ENST00000562946 ZRANB1Q9UGI0 708 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms