RNA–Protein interactions for RNA: ENST00000562872.1

KLHDC4-209, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-209ENST00000562872 NEUROD1Q13562 356 aa15.99■□□□□ 0.15
KLHDC4-209ENST00000562872 TRPM1Q7Z4N2 1603 aa15.98■□□□□ 0.15
KLHDC4-209ENST00000562872 VPS72Q15906 364 aa15.98■□□□□ 0.15
KLHDC4-209ENST00000562872 QRICH2Q9H0J4 1663 aa15.98■□□□□ 0.15
KLHDC4-209ENST00000562872 POLR3AO14802 1390 aaPredicted RBP15.98■□□□□ 0.15
KLHDC4-209ENST00000562872 ACEP12821 1306 aa15.97■□□□□ 0.15
KLHDC4-209ENST00000562872 CENPJQ9HC77 1338 aaPredicted RBP15.97■□□□□ 0.15
KLHDC4-209ENST00000562872 BRWD3Q6RI45 1802 aa15.97■□□□□ 0.15
KLHDC4-209ENST00000562872 NUTM2GQ5VZR2 741 aa15.97■□□□□ 0.15
KLHDC4-209ENST00000562872 CABP2Q9NPB3 220 aa15.96■□□□□ 0.15
KLHDC4-209ENST00000562872 PHRF1Q9P1Y6 1649 aaKnown RBP15.96■□□□□ 0.15
KLHDC4-209ENST00000562872 COL14A1Q05707 1796 aaKnown RBP15.95■□□□□ 0.14
KLHDC4-209ENST00000562872 NBPF8Q3BBV2 869 aa15.95■□□□□ 0.14
KLHDC4-209ENST00000562872 BTG4Q9NY30 223 aa15.95■□□□□ 0.14
KLHDC4-209ENST00000562872 CCDC9Q9Y3X0 531 aaKnown RBP15.95■□□□□ 0.14
KLHDC4-209ENST00000562872 CCDC61Q9Y6R9 512 aa15.95■□□□□ 0.14
KLHDC4-209ENST00000562872 PLEKHG3A1L390 1219 aa15.94■□□□□ 0.14
KLHDC4-209ENST00000562872 SEPT12Q8IYM1 358 aa15.94■□□□□ 0.14
KLHDC4-209ENST00000562872 PPIP5K1Q6PFW1 1433 aa15.94■□□□□ 0.14
KLHDC4-209ENST00000562872 KIAA0232Q92628 1395 aa15.93■□□□□ 0.14
KLHDC4-209ENST00000562872 SRPK2P78362 688 aaKnown RBP15.93■□□□□ 0.14
KLHDC4-209ENST00000562872 CHRNA2Q15822 529 aa15.92■□□□□ 0.14
KLHDC4-209ENST00000562872 NRKQ7Z2Y5 1582 aa15.92■□□□□ 0.14
KLHDC4-209ENST00000562872 ONECUT3O60422 494 aaPredicted RBP15.91■□□□□ 0.14
KLHDC4-209ENST00000562872 FAM98CQ17RN3 349 aaKnown RBP15.91■□□□□ 0.14
KLHDC4-209ENST00000562872 PRDM11Q9NQV5 511 aa15.91■□□□□ 0.14
KLHDC4-209ENST00000562872 ROCK2O75116 1388 aaKnown RBP15.9■□□□□ 0.14
KLHDC4-209ENST00000562872 ZC3H6P61129 1189 aaKnown RBP15.9■□□□□ 0.14
KLHDC4-209ENST00000562872 CABP1Q9NZU7 370 aa15.88■□□□□ 0.13
KLHDC4-209ENST00000562872 USP19O94966 1318 aa15.88■□□□□ 0.13
KLHDC4-209ENST00000562872 SPATA31A5Q5VU36 1347 aa15.88■□□□□ 0.13
KLHDC4-209ENST00000562872 SPATA31A7Q8IWB4 1347 aa15.88■□□□□ 0.13
KLHDC4-209ENST00000562872 THSD7AQ9UPZ6 1657 aa15.87■□□□□ 0.13
KLHDC4-209ENST00000562872 ABTB2Q8N961 1025 aa15.87■□□□□ 0.13
KLHDC4-209ENST00000562872 USP6P35125 1406 aa15.86■□□□□ 0.13
KLHDC4-209ENST00000562872 BLMP54132 1417 aaPredicted RBP15.86■□□□□ 0.13
KLHDC4-209ENST00000562872 A0A0G2JS52 829 aa15.86■□□□□ 0.13
KLHDC4-209ENST00000562872 MYT1Q01538 1121 aa15.86■□□□□ 0.13
KLHDC4-209ENST00000562872 KRT27Q7Z3Y8 459 aa15.86■□□□□ 0.13
KLHDC4-209ENST00000562872 SSH2Q76I76 1423 aa15.85■□□□□ 0.13
KLHDC4-209ENST00000562872 FAM182BQ5T319 152 aa15.85■□□□□ 0.13
KLHDC4-209ENST00000562872 DEFB132Q7Z7B7 95 aa15.85■□□□□ 0.13
KLHDC4-209ENST00000562872 LMO7Q8WWI1 1683 aa15.85■□□□□ 0.13
KLHDC4-209ENST00000562872 CAMTA1Q9Y6Y1 1673 aa15.85■□□□□ 0.13
KLHDC4-209ENST00000562872 SRCAPQ6ZRS2 3230 aa15.85■□□□□ 0.13
KLHDC4-209ENST00000562872 PIK3C2AO00443 1686 aa15.84■□□□□ 0.13
KLHDC4-209ENST00000562872 STRN4Q9NRL3 753 aa15.84■□□□□ 0.13
KLHDC4-209ENST00000562872 CCDC125Q86Z20 511 aa15.83■□□□□ 0.12
KLHDC4-209ENST00000562872 SPATA31A1Q5TZJ5 1347 aa15.83■□□□□ 0.12
KLHDC4-209ENST00000562872 EVC2Q86UK5 1308 aa15.83■□□□□ 0.12
KLHDC4-209ENST00000562872 CPDO75976 1380 aa15.82■□□□□ 0.12
KLHDC4-209ENST00000562872 SLIT3O75094 1523 aa15.81■□□□□ 0.12
KLHDC4-209ENST00000562872 GCP02774 474 aa15.81■□□□□ 0.12
KLHDC4-209ENST00000562872 LARP1Q6PKG0 1096 aaKnown RBP15.81■□□□□ 0.12
KLHDC4-209ENST00000562872 NLRP13Q86W25 1043 aa15.8■□□□□ 0.12
KLHDC4-209ENST00000562872 USP35Q9P2H5 1018 aa15.8■□□□□ 0.12
KLHDC4-209ENST00000562872 AKAP12Q02952 1782 aa15.8■□□□□ 0.12
KLHDC4-209ENST00000562872 TONSLQ96HA7 1378 aa15.79■□□□□ 0.12
KLHDC4-209ENST00000562872 CARD11Q9BXL7 1154 aa15.79■□□□□ 0.12
KLHDC4-209ENST00000562872 COL5A2P05997 1499 aaPredicted RBP15.78■□□□□ 0.12
KLHDC4-209ENST00000562872 BRD4O60885 1362 aaPredicted RBP15.78■□□□□ 0.12
KLHDC4-209ENST00000562872 NLRP6P59044 892 aa15.78■□□□□ 0.12
KLHDC4-209ENST00000562872 CPSF1Q10570 1443 aaKnown RBP15.77■□□□□ 0.12
KLHDC4-209ENST00000562872 TTC21BQ7Z4L5 1316 aa15.77■□□□□ 0.12
KLHDC4-209ENST00000562872 ZBTB7CA1YPR0 619 aa15.77■□□□□ 0.12
KLHDC4-209ENST00000562872 TRIM26Q12899 539 aaPredicted RBP15.77■□□□□ 0.12
KLHDC4-209ENST00000562872 ZRANB1Q9UGI0 708 aa15.77■□□□□ 0.12
KLHDC4-209ENST00000562872 CD163L1Q9NR16 1453 aa15.77■□□□□ 0.11
KLHDC4-209ENST00000562872 SBNO2Q9Y2G9 1366 aa15.76■□□□□ 0.11
KLHDC4-209ENST00000562872 EVA1CP58658 441 aa15.76■□□□□ 0.11
KLHDC4-209ENST00000562872 TNS1Q9HBL0 1735 aaKnown RBP15.76■□□□□ 0.11
KLHDC4-209ENST00000562872 COL18A1P39060 1754 aa15.75■□□□□ 0.11
KLHDC4-209ENST00000562872 MON2Q7Z3U7 1717 aa15.74■□□□□ 0.11
KLHDC4-209ENST00000562872 SF3B2Q13435 895 aaKnown RBP15.74■□□□□ 0.11
KLHDC4-209ENST00000562872 AXIN2Q9Y2T1 843 aa15.74■□□□□ 0.11
KLHDC4-209ENST00000562872 AATKQ6ZMQ8 1374 aa15.74■□□□□ 0.11
KLHDC4-209ENST00000562872 KTN1Q86UP2 1357 aaKnown RBP15.74■□□□□ 0.11
KLHDC4-209ENST00000562872 NFAT5O94916 1531 aa15.73■□□□□ 0.11
KLHDC4-209ENST00000562872 SOX12O15370 315 aa15.73■□□□□ 0.11
KLHDC4-209ENST00000562872 BARGINQ6ZT62 677 aa15.73■□□□□ 0.11
KLHDC4-209ENST00000562872 RGPD1P0DJD0 1748 aa15.73■□□□□ 0.11
KLHDC4-209ENST00000562872 EN1Q05925 392 aaPredicted RBP15.72■□□□□ 0.11
KLHDC4-209ENST00000562872 TCP11L2Q8N4U5 519 aa15.72■□□□□ 0.11
KLHDC4-209ENST00000562872 ZNF692Q9BU19 519 aaPredicted RBP15.71■□□□□ 0.11
KLHDC4-209ENST00000562872 TTC21AQ8NDW8 1320 aa15.7■□□□□ 0.1
KLHDC4-209ENST00000562872 CRB1P82279 1406 aa15.7■□□□□ 0.1
KLHDC4-209ENST00000562872 TRIM37O94972 964 aa15.7■□□□□ 0.1
KLHDC4-209ENST00000562872 BAG6P46379 1132 aa15.7■□□□□ 0.1
KLHDC4-209ENST00000562872 ARHGEF25Q86VW2 580 aa15.7■□□□□ 0.1
KLHDC4-209ENST00000562872 NME9Q86XW9 330 aa15.7■□□□□ 0.1
KLHDC4-209ENST00000562872 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.7■□□□□ 0.1
KLHDC4-209ENST00000562872 SLC12A5Q9H2X9 1139 aa15.7■□□□□ 0.1
KLHDC4-209ENST00000562872 DISP2A7MBM2 1401 aa15.69■□□□□ 0.1
KLHDC4-209ENST00000562872 PARP4Q9UKK3 1724 aaKnown RBP15.69■□□□□ 0.1
KLHDC4-209ENST00000562872 TESK2Q96S53 571 aa15.69■□□□□ 0.1
KLHDC4-209ENST00000562872 LRRC37A3O60309 1634 aa15.68■□□□□ 0.1
KLHDC4-209ENST00000562872 RGPD5Q99666 1765 aa15.68■□□□□ 0.1
KLHDC4-209ENST00000562872 A0A1W2PP64 1363 aa15.68■□□□□ 0.1
KLHDC4-209ENST00000562872 PSDA5PKW4 1024 aaPredicted RBP15.68■□□□□ 0.1
KLHDC4-209ENST00000562872 TMC1Q8TDI8 760 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms