RNA–Protein interactions for RNA: ENST00000562729.5

CHRFAM7A-204, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 4

Gene CHRFAM7A, Length 573 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-204ENST00000562729 PHF8Q9UPP1 1060 aa13.37□□□□□ -0.27
CHRFAM7A-204ENST00000562729 PLEKHG5O94827 1062 aa13.36□□□□□ -0.27
CHRFAM7A-204ENST00000562729 KRT28Q7Z3Y7 464 aa13.36□□□□□ -0.27
CHRFAM7A-204ENST00000562729 RGPD8O14715 1765 aaPredicted RBP13.35□□□□□ -0.27
CHRFAM7A-204ENST00000562729 POTEIP0CG38 1075 aa13.35□□□□□ -0.27
CHRFAM7A-204ENST00000562729 RXRBP28702 533 aa13.35□□□□□ -0.27
CHRFAM7A-204ENST00000562729 TRIM26Q12899 539 aaPredicted RBP13.35□□□□□ -0.27
CHRFAM7A-204ENST00000562729 PXDNQ92626 1479 aa13.35□□□□□ -0.27
CHRFAM7A-204ENST00000562729 PMFBP1Q8TBY8 1022 aa13.34□□□□□ -0.27
CHRFAM7A-204ENST00000562729 KIAA1210Q9ULL0 1709 aa13.33□□□□□ -0.27
CHRFAM7A-204ENST00000562729 ANKARQ7Z5J8 1434 aa13.33□□□□□ -0.28
CHRFAM7A-204ENST00000562729 WASLO00401 505 aaPredicted RBP13.33□□□□□ -0.28
CHRFAM7A-204ENST00000562729 SIN3AQ96ST3 1273 aa13.33□□□□□ -0.28
CHRFAM7A-204ENST00000562729 ARHGEF28Q8N1W1 1705 aaKnown RBP13.33□□□□□ -0.28
CHRFAM7A-204ENST00000562729 GPRASP1Q5JY77 1395 aa13.32□□□□□ -0.28
CHRFAM7A-204ENST00000562729 ADGRB2O60241 1585 aa13.32□□□□□ -0.28
CHRFAM7A-204ENST00000562729 NGDNQ8NEJ9 315 aaKnown RBP13.32□□□□□ -0.28
CHRFAM7A-204ENST00000562729 L3MBTL2Q969R5 705 aa13.32□□□□□ -0.28
CHRFAM7A-204ENST00000562729 QTRT2Q9H974 415 aaKnown RBP13.32□□□□□ -0.28
CHRFAM7A-204ENST00000562729 COL22A1Q8NFW1 1626 aaPredicted RBP13.31□□□□□ -0.28
CHRFAM7A-204ENST00000562729 USP21Q9UK80 565 aa13.31□□□□□ -0.28
CHRFAM7A-204ENST00000562729 TULP4Q9NRJ4 1543 aa13.3□□□□□ -0.28
CHRFAM7A-204ENST00000562729 PAK3O75914 559 aaPredicted RBP13.3□□□□□ -0.28
CHRFAM7A-204ENST00000562729 NBPF1Q3BBV0 1214 aa13.3□□□□□ -0.28
CHRFAM7A-204ENST00000562729 SPATA31A3Q5VYP0 1347 aa13.3□□□□□ -0.28
CHRFAM7A-204ENST00000562729 ARHGEF10O15013 1369 aa13.29□□□□□ -0.28
CHRFAM7A-204ENST00000562729 TNS3Q68CZ2 1445 aa13.29□□□□□ -0.28
CHRFAM7A-204ENST00000562729 USP32Q8NFA0 1604 aa13.28□□□□□ -0.28
CHRFAM7A-204ENST00000562729 ITSN1Q15811 1721 aa13.28□□□□□ -0.28
CHRFAM7A-204ENST00000562729 RBM6P78332 1123 aaKnown RBP13.28□□□□□ -0.28
CHRFAM7A-204ENST00000562729 SRPK2P78362 688 aaKnown RBP13.28□□□□□ -0.28
CHRFAM7A-204ENST00000562729 CDK19Q9BWU1 502 aa13.28□□□□□ -0.28
CHRFAM7A-204ENST00000562729 TRPC5Q9UL62 973 aaPredicted RBP13.28□□□□□ -0.28
CHRFAM7A-204ENST00000562729 TONSLQ96HA7 1378 aa13.28□□□□□ -0.28
CHRFAM7A-204ENST00000562729 CLCN6P51797 869 aa13.27□□□□□ -0.29
CHRFAM7A-204ENST00000562729 NUDT16Q96DE0 195 aaKnown RBP13.27□□□□□ -0.29
CHRFAM7A-204ENST00000562729 CENPJQ9HC77 1338 aaPredicted RBP13.27□□□□□ -0.29
CHRFAM7A-204ENST00000562729 SBNO1A3KN83 1393 aa13.27□□□□□ -0.29
CHRFAM7A-204ENST00000562729 ROCK2O75116 1388 aaKnown RBP13.27□□□□□ -0.29
CHRFAM7A-204ENST00000562729 MARF1Q9Y4F3 1742 aaKnown RBP13.27□□□□□ -0.29
CHRFAM7A-204ENST00000562729 PRR36Q9H6K5 1346 aa13.25□□□□□ -0.29
CHRFAM7A-204ENST00000562729 CABLES1Q8TDN4 633 aa13.25□□□□□ -0.29
CHRFAM7A-204ENST00000562729 CREBZFQ9NS37 354 aa13.25□□□□□ -0.29
CHRFAM7A-204ENST00000562729 FNBP4Q8N3X1 1017 aaPredicted RBP13.24□□□□□ -0.29
CHRFAM7A-204ENST00000562729 QRICH2Q9H0J4 1663 aa13.24□□□□□ -0.29
CHRFAM7A-204ENST00000562729 CCDC9Q9Y3X0 531 aaKnown RBP13.23□□□□□ -0.29
CHRFAM7A-204ENST00000562729 CCDC61Q9Y6R9 512 aa13.23□□□□□ -0.29
CHRFAM7A-204ENST00000562729 TRPM1Q7Z4N2 1603 aa13.23□□□□□ -0.29
CHRFAM7A-204ENST00000562729 ATP7BP35670 1465 aa13.23□□□□□ -0.29
CHRFAM7A-204ENST00000562729 CDK12Q9NYV4 1490 aaPredicted RBP13.23□□□□□ -0.29
CHRFAM7A-204ENST00000562729 EVC2Q86UK5 1308 aa13.21□□□□□ -0.29
CHRFAM7A-204ENST00000562729 ZNF579Q8NAF0 562 aaKnown RBP13.21□□□□□ -0.29
CHRFAM7A-204ENST00000562729 CABP2Q9NPB3 220 aa13.21□□□□□ -0.29
CHRFAM7A-204ENST00000562729 ACEP12821 1306 aa13.2□□□□□ -0.3
CHRFAM7A-204ENST00000562729 UNC5CLQ8IV45 518 aa13.2□□□□□ -0.3
CHRFAM7A-204ENST00000562729 RGS12O14924 1447 aa13.2□□□□□ -0.3
CHRFAM7A-204ENST00000562729 PPIP5K1Q6PFW1 1433 aa13.2□□□□□ -0.3
CHRFAM7A-204ENST00000562729 TRPM3Q9HCF6 1732 aaPredicted RBP13.19□□□□□ -0.3
CHRFAM7A-204ENST00000562729 A0A0G2JS52 829 aa13.19□□□□□ -0.3
CHRFAM7A-204ENST00000562729 MYT1Q01538 1121 aa13.19□□□□□ -0.3
CHRFAM7A-204ENST00000562729 GJD4Q96KN9 370 aaPredicted RBP13.19□□□□□ -0.3
CHRFAM7A-204ENST00000562729 CARD11Q9BXL7 1154 aa13.19□□□□□ -0.3
CHRFAM7A-204ENST00000562729 ZRANB1Q9UGI0 708 aa13.19□□□□□ -0.3
CHRFAM7A-204ENST00000562729 ATRNO75882 1429 aa13.19□□□□□ -0.3
CHRFAM7A-204ENST00000562729 ABCA3Q99758 1704 aa13.19□□□□□ -0.3
CHRFAM7A-204ENST00000562729 NBPF8Q3BBV2 869 aa13.18□□□□□ -0.3
CHRFAM7A-204ENST00000562729 NUTM2GQ5VZR2 741 aa13.18□□□□□ -0.3
CHRFAM7A-204ENST00000562729 ABTB2Q8N961 1025 aa13.18□□□□□ -0.3
CHRFAM7A-204ENST00000562729 TOPAZ1Q8N9V7 1692 aa13.18□□□□□ -0.3
CHRFAM7A-204ENST00000562729 ALS2Q96Q42 1657 aa13.18□□□□□ -0.3
CHRFAM7A-204ENST00000562729 BCL9LQ86UU0 1499 aa13.17□□□□□ -0.3
CHRFAM7A-204ENST00000562729 PCGF6Q9BYE7 350 aa13.17□□□□□ -0.3
CHRFAM7A-204ENST00000562729 PRDM11Q9NQV5 511 aa13.17□□□□□ -0.3
CHRFAM7A-204ENST00000562729 PLCH1Q4KWH8 1693 aa13.17□□□□□ -0.3
CHRFAM7A-204ENST00000562729 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.16□□□□□ -0.3
CHRFAM7A-204ENST00000562729 PLEKHG3A1L390 1219 aa13.16□□□□□ -0.3
CHRFAM7A-204ENST00000562729 DCBLD2Q96PD2 775 aa13.16□□□□□ -0.3
CHRFAM7A-204ENST00000562729 POLR3AO14802 1390 aaPredicted RBP13.16□□□□□ -0.3
CHRFAM7A-204ENST00000562729 ATAD2Q6PL18 1390 aa13.16□□□□□ -0.3
CHRFAM7A-204ENST00000562729 SLIT2O94813 1529 aa13.15□□□□□ -0.3
CHRFAM7A-204ENST00000562729 FAM83GA6ND36 823 aa13.15□□□□□ -0.3
CHRFAM7A-204ENST00000562729 SPDYE4A6NLX3 237 aa13.15□□□□□ -0.3
CHRFAM7A-204ENST00000562729 UPF1Q92900 1129 aaKnown RBP eCLIP13.15□□□□□ -0.3
CHRFAM7A-204ENST00000562729 BTG4Q9NY30 223 aa13.15□□□□□ -0.3
CHRFAM7A-204ENST00000562729 CABP1Q9NZU7 370 aa13.15□□□□□ -0.3
CHRFAM7A-204ENST00000562729 NWD2Q9ULI1 1742 aa13.15□□□□□ -0.3
CHRFAM7A-204ENST00000562729 COL14A1Q05707 1796 aaKnown RBP13.14□□□□□ -0.31
CHRFAM7A-204ENST00000562729 RALGAPBQ86X10 1494 aa13.13□□□□□ -0.31
CHRFAM7A-204ENST00000562729 ZBTB7CA1YPR0 619 aa13.13□□□□□ -0.31
CHRFAM7A-204ENST00000562729 ZC3H6P61129 1189 aaKnown RBP13.13□□□□□ -0.31
CHRFAM7A-204ENST00000562729 VPS72Q15906 364 aa13.13□□□□□ -0.31
CHRFAM7A-204ENST00000562729 NLRP13Q86W25 1043 aa13.13□□□□□ -0.31
CHRFAM7A-204ENST00000562729 EVA1CP58658 441 aa13.12□□□□□ -0.31
CHRFAM7A-204ENST00000562729 PHRF1Q9P1Y6 1649 aaKnown RBP13.11□□□□□ -0.31
CHRFAM7A-204ENST00000562729 TMC1Q8TDI8 760 aa13.11□□□□□ -0.31
CHRFAM7A-204ENST00000562729 STRN4Q9NRL3 753 aa13.11□□□□□ -0.31
CHRFAM7A-204ENST00000562729 BRD4O60885 1362 aaPredicted RBP13.1□□□□□ -0.31
CHRFAM7A-204ENST00000562729 KIAA0232Q92628 1395 aa13.1□□□□□ -0.31
CHRFAM7A-204ENST00000562729 NLRP6P59044 892 aa13.1□□□□□ -0.31
CHRFAM7A-204ENST00000562729 CHRNA2Q15822 529 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms