RNA–Protein interactions for RNA: ENST00000562710.1

LINC00565-201, long intergenic non-protein coding RNA 565, humanhuman

BASIC

Gene LINC00565, Length 2,331 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00565-201ENST00000562710 MYO5BQ9ULV0 1848 aa27.68■■■□□ 2.02
LINC00565-201ENST00000562710 ATAD2Q6PL18 1390 aa27.67■■■□□ 2.02
LINC00565-201ENST00000562710 TRIM27P14373 513 aa27.67■■■□□ 2.02
LINC00565-201ENST00000562710 SLKQ9H2G2 1235 aaPredicted RBP27.67■■■□□ 2.02
LINC00565-201ENST00000562710 MED14O60244 1454 aa27.67■■■□□ 2.02
LINC00565-201ENST00000562710 PTPRMP28827 1452 aa27.67■■■□□ 2.02
LINC00565-201ENST00000562710 FYB1O15117 783 aa27.67■■■□□ 2.02
LINC00565-201ENST00000562710 SSH1Q8WYL5 1049 aa27.66■■■□□ 2.02
LINC00565-201ENST00000562710 TERF2IPQ9NYB0 399 aa27.66■■■□□ 2.02
LINC00565-201ENST00000562710 IL16Q14005 1332 aa27.66■■■□□ 2.02
LINC00565-201ENST00000562710 ANTXR1Q9H6X2 564 aa27.65■■■□□ 2.02
LINC00565-201ENST00000562710 DDX19BQ9UMR2 479 aa27.64■■■□□ 2.02
LINC00565-201ENST00000562710 CD163L1Q9NR16 1453 aa27.64■■■□□ 2.02
LINC00565-201ENST00000562710 HDAC1Q13547 482 aaPredicted RBP27.64■■■□□ 2.02
LINC00565-201ENST00000562710 CLTCQ00610 1675 aaKnown RBP27.63■■■□□ 2.01
LINC00565-201ENST00000562710 ATF7IPQ6VMQ6 1270 aa27.63■■■□□ 2.01
LINC00565-201ENST00000562710 TBC1D2Q9BYX2 928 aa27.63■■■□□ 2.01
LINC00565-201ENST00000562710 SENP3Q9H4L4 574 aaPredicted RBP27.63■■■□□ 2.01
LINC00565-201ENST00000562710 MINK1Q8N4C8 1332 aaPredicted RBP27.62■■■□□ 2.01
LINC00565-201ENST00000562710 TMEM131LA2VDJ0 1609 aa27.62■■■□□ 2.01
LINC00565-201ENST00000562710 ITPRIPQ8IWB1 547 aa27.61■■■□□ 2.01
LINC00565-201ENST00000562710 PRAM1Q96QH2 718 aa27.61■■■□□ 2.01
LINC00565-201ENST00000562710 RIPK4P57078 832 aa27.61■■■□□ 2.01
LINC00565-201ENST00000562710 NOB1Q9ULX3 412 aaKnown RBP27.6■■■□□ 2.01
LINC00565-201ENST00000562710 YTHDC2Q9H6S0 1430 aaKnown RBP27.59■■■□□ 2.01
LINC00565-201ENST00000562710 POGKQ9P215 609 aa27.59■■■□□ 2.01
LINC00565-201ENST00000562710 PREX1Q8TCU6 1659 aa27.59■■■□□ 2.01
LINC00565-201ENST00000562710 RICTORQ6R327 1708 aa27.59■■■□□ 2.01
LINC00565-201ENST00000562710 DIAPH1O60610 1272 aaKnown RBP27.58■■■□□ 2.01
LINC00565-201ENST00000562710 PNPLA6Q8IY17 1366 aa27.58■■■□□ 2.01
LINC00565-201ENST00000562710 OSCARQ8IYS5 282 aa27.57■■■□□ 2
LINC00565-201ENST00000562710 PNNQ9H307 717 aaKnown RBP27.57■■■□□ 2
LINC00565-201ENST00000562710 HDGFL2Q7Z4V5 671 aaPredicted RBP27.56■■■□□ 2
LINC00565-201ENST00000562710 SMC5Q8IY18 1101 aa27.56■■■□□ 2
LINC00565-201ENST00000562710 TMEM57Q8N5G2 664 aa27.55■■■□□ 2
LINC00565-201ENST00000562710 KIF16BQ96L93 1317 aa27.55■■■□□ 2
LINC00565-201ENST00000562710 ZBTB40Q9NUA8 1239 aa27.54■■■□□ 2
LINC00565-201ENST00000562710 YEATS2Q9ULM3 1422 aa27.54■■■□□ 2
LINC00565-201ENST00000562710 KIF20BQ96Q89 1820 aa27.53■■■□□ 2
LINC00565-201ENST00000562710 C22orf23Q9BZE7 217 aa27.53■■■□□ 2
LINC00565-201ENST00000562710 IPO8O15397 1037 aaKnown RBP27.53■■■□□ 2
LINC00565-201ENST00000562710 CDK19Q9BWU1 502 aa27.52■■■□□ 2
LINC00565-201ENST00000562710 ARHGEF40Q8TER5 1519 aa27.5■■□□□ 1.99
LINC00565-201ENST00000562710 FCHSD2O94868 740 aa27.5■■□□□ 1.99
LINC00565-201ENST00000562710 MFAP1P55081 439 aaKnown RBP27.5■■□□□ 1.99
LINC00565-201ENST00000562710 ALDH1L2Q3SY69 923 aa27.5■■□□□ 1.99
LINC00565-201ENST00000562710 CDC42BPGQ6DT37 1551 aa27.5■■□□□ 1.99
LINC00565-201ENST00000562710 ALKQ9UM73 1620 aa27.5■■□□□ 1.99
LINC00565-201ENST00000562710 CABP1Q9NZU7 370 aa27.5■■□□□ 1.99
LINC00565-201ENST00000562710 LRRC7Q96NW7 1537 aa27.48■■□□□ 1.99
LINC00565-201ENST00000562710 FAM135BQ49AJ0 1406 aa27.45■■□□□ 1.98
LINC00565-201ENST00000562710 RSPH6AQ9H0K4 717 aa27.45■■□□□ 1.98
LINC00565-201ENST00000562710 PRKAR2BP31323 418 aa27.44■■□□□ 1.98
LINC00565-201ENST00000562710 NUCB1Q02818 461 aa27.44■■□□□ 1.98
LINC00565-201ENST00000562710 FBXO31Q5XUX0 539 aaPredicted RBP27.44■■□□□ 1.98
LINC00565-201ENST00000562710 SPRYD3Q8NCJ5 442 aa27.44■■□□□ 1.98
LINC00565-201ENST00000562710 ZNF428Q96B54 188 aa27.43■■□□□ 1.98
LINC00565-201ENST00000562710 ANO8Q9HCE9 1232 aaPredicted RBP27.43■■□□□ 1.98
LINC00565-201ENST00000562710 BRPF1P55201 1214 aaPredicted RBP27.42■■□□□ 1.98
LINC00565-201ENST00000562710 POLKQ9UBT6 870 aa27.42■■□□□ 1.98
LINC00565-201ENST00000562710 PPIP5K1Q6PFW1 1433 aa27.42■■□□□ 1.98
LINC00565-201ENST00000562710 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.41■■□□□ 1.98
LINC00565-201ENST00000562710 FBLN1P23142 703 aa27.39■■□□□ 1.98
LINC00565-201ENST00000562710 MAP2P11137 1827 aaKnown RBP27.39■■□□□ 1.98
LINC00565-201ENST00000562710 CHMP5Q9NZZ3 219 aa27.39■■□□□ 1.97
LINC00565-201ENST00000562710 ATP7BP35670 1465 aa27.38■■□□□ 1.97
LINC00565-201ENST00000562710 MCM4P33991 863 aa27.38■■□□□ 1.97
LINC00565-201ENST00000562710 CHD1LQ86WJ1 897 aa27.38■■□□□ 1.97
LINC00565-201ENST00000562710 LNPKQ9C0E8 428 aa27.38■■□□□ 1.97
LINC00565-201ENST00000562710 NFE2L2Q16236 605 aa27.37■■□□□ 1.97
LINC00565-201ENST00000562710 STAG3Q9UJ98 1225 aa27.37■■□□□ 1.97
LINC00565-201ENST00000562710 L1TD1Q5T7N2 865 aaKnown RBP27.36■■□□□ 1.97
LINC00565-201ENST00000562710 PHACTR3Q96KR7 559 aa27.36■■□□□ 1.97
LINC00565-201ENST00000562710 DLC1Q96QB1 1528 aa27.36■■□□□ 1.97
LINC00565-201ENST00000562710 VAMP4O75379 141 aa27.35■■□□□ 1.97
LINC00565-201ENST00000562710 RBM25P49756 843 aaKnown RBP27.35■■□□□ 1.97
LINC00565-201ENST00000562710 HSCBQ8IWL3 235 aa27.35■■□□□ 1.97
LINC00565-201ENST00000562710 ZBTB7BO15156 539 aaPredicted RBP27.34■■□□□ 1.97
LINC00565-201ENST00000562710 HMOX1P09601 288 aa27.34■■□□□ 1.97
LINC00565-201ENST00000562710 CALD1Q05682 793 aaKnown RBP27.34■■□□□ 1.97
LINC00565-201ENST00000562710 WAPLQ7Z5K2 1190 aa27.34■■□□□ 1.97
LINC00565-201ENST00000562710 ARHGAP45Q92619 1136 aa27.34■■□□□ 1.97
LINC00565-201ENST00000562710 FAM43AQ8N2R8 423 aa27.33■■□□□ 1.97
LINC00565-201ENST00000562710 MRPL50Q8N5N7 158 aaKnown RBP27.33■■□□□ 1.97
LINC00565-201ENST00000562710 CHMP4BQ9H444 224 aaKnown RBP27.33■■□□□ 1.97
LINC00565-201ENST00000562710 PIK3R4Q99570 1358 aa27.32■■□□□ 1.96
LINC00565-201ENST00000562710 THUMPD2Q9BTF0 503 aaKnown RBP27.32■■□□□ 1.96
LINC00565-201ENST00000562710 PTCH1Q13635 1447 aa27.32■■□□□ 1.96
LINC00565-201ENST00000562710 BMP2KLQ5H9B9 411 aa27.31■■□□□ 1.96
LINC00565-201ENST00000562710 GNAI1P63096 354 aa27.3■■□□□ 1.96
LINC00565-201ENST00000562710 TSPYL6Q8N831 410 aa27.3■■□□□ 1.96
LINC00565-201ENST00000562710 GCC1Q96CN9 775 aa27.3■■□□□ 1.96
LINC00565-201ENST00000562710 IFT57Q9NWB7 429 aa27.3■■□□□ 1.96
LINC00565-201ENST00000562710 EMILIN1Q9Y6C2 1016 aa27.29■■□□□ 1.96
LINC00565-201ENST00000562710 NCOA3Q9Y6Q9 1424 aa27.29■■□□□ 1.96
LINC00565-201ENST00000562710 SETD1AO15047 1707 aaKnown RBP27.28■■□□□ 1.96
LINC00565-201ENST00000562710 IL13P35225 146 aa27.28■■□□□ 1.96
LINC00565-201ENST00000562710 SNX21Q969T3 373 aa27.28■■□□□ 1.96
LINC00565-201ENST00000562710 ZNF692Q9BU19 519 aaPredicted RBP27.28■■□□□ 1.96
LINC00565-201ENST00000562710 ZNF853P0CG23 659 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms